RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 KRTAP1-3Q8IUG1 177 aa5.04□□□□□ -1.6
NHLRC3-201ENST00000379599 NOTCH1P46531 2555 aa5.04□□□□□ -1.6
NHLRC3-201ENST00000379599 SPINK6Q6UWN8 80 aa5.03□□□□□ -1.6
NHLRC3-201ENST00000379599 KRTAP3-3Q9BYR6 98 aa5.03□□□□□ -1.6
NHLRC3-201ENST00000379599 KRTAP3-2Q9BYR7 98 aa5.03□□□□□ -1.6
NHLRC3-201ENST00000379599 NBEAL1Q6ZS30 2694 aa5.02□□□□□ -1.61
NHLRC3-201ENST00000379599 COL6A5A8TX70 2615 aa5.02□□□□□ -1.61
NHLRC3-201ENST00000379599 C20orf166-AS1Q96NR2 134 aa5.01□□□□□ -1.61
NHLRC3-201ENST00000379599 FBN1P35555 2871 aaKnown RBP5□□□□□ -1.61
NHLRC3-201ENST00000379599 SPRR1BP22528 89 aa5□□□□□ -1.61
NHLRC3-201ENST00000379599 ANK3Q12955 4377 aaKnown RBP5□□□□□ -1.61
NHLRC3-201ENST00000379599 LINC01556Q5JQF7 62 aa5□□□□□ -1.61
NHLRC3-201ENST00000379599 ALMS1Q8TCU4 4167 aa4.99□□□□□ -1.61
NHLRC3-201ENST00000379599 PKD1L1Q8TDX9 2849 aa4.97□□□□□ -1.61
NHLRC3-201ENST00000379599 KRTAP13-3Q3SY46 172 aa4.97□□□□□ -1.61
NHLRC3-201ENST00000379599 KRTAP11-1Q8IUC1 163 aa4.97□□□□□ -1.61
NHLRC3-201ENST00000379599 MGAM2Q2M2H8 2515 aa4.96□□□□□ -1.62
NHLRC3-201ENST00000379599 KRTAP1-1Q07627 177 aa4.96□□□□□ -1.62
NHLRC3-201ENST00000379599 H0YAA0 97 aa4.95□□□□□ -1.62
NHLRC3-201ENST00000379599 CSMD3Q7Z407 3707 aa4.94□□□□□ -1.62
NHLRC3-201ENST00000379599 NUPR2A6NF83 97 aa4.94□□□□□ -1.62
NHLRC3-201ENST00000379599 IGKV2D-30A0A075B6S6 120 aa4.93□□□□□ -1.62
NHLRC3-201ENST00000379599 IGKV2-30P06310 120 aa4.93□□□□□ -1.62
NHLRC3-201ENST00000379599 CHTF8P0CG12 524 aa4.93□□□□□ -1.62
NHLRC3-201ENST00000379599 Q6ZSA8 131 aa4.93□□□□□ -1.62
NHLRC3-201ENST00000379599 K7ERS5 55 aa4.92□□□□□ -1.62
NHLRC3-201ENST00000379599 LY6G6CO95867 125 aa4.92□□□□□ -1.62
NHLRC3-201ENST00000379599 PSORS1C2Q9UIG4 136 aa4.92□□□□□ -1.62
NHLRC3-201ENST00000379599 A0A087WTM6 91 aa4.91□□□□□ -1.62
NHLRC3-201ENST00000379599 H3BNG1 76 aa4.91□□□□□ -1.62
NHLRC3-201ENST00000379599 FAM229AH3BQW9 127 aa4.91□□□□□ -1.62
NHLRC3-201ENST00000379599 PANO1I0J062 215 aa4.91□□□□□ -1.62
NHLRC3-201ENST00000379599 KRTAP10-3P60369 221 aa4.9□□□□□ -1.62
NHLRC3-201ENST00000379599 A0A1B0GU33 70 aa4.89□□□□□ -1.63
NHLRC3-201ENST00000379599 LUZP6Q538Z0 58 aa4.88□□□□□ -1.63
NHLRC3-201ENST00000379599 ANAPC11Q9NYG5 84 aa4.88□□□□□ -1.63
NHLRC3-201ENST00000379599 COL7A1Q02388 2944 aa4.88□□□□□ -1.63
NHLRC3-201ENST00000379599 C14orf177Q52M58 125 aa4.88□□□□□ -1.63
NHLRC3-201ENST00000379599 Q8N1X5 172 aa4.85□□□□□ -1.63
NHLRC3-201ENST00000379599 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.64
NHLRC3-201ENST00000379599 TYMSOSQ8TAI1 123 aa4.83□□□□□ -1.64
NHLRC3-201ENST00000379599 TENM3Q9P273 2699 aa4.83□□□□□ -1.64
NHLRC3-201ENST00000379599 CIRBP-AS1Q8TBR5 109 aa4.82□□□□□ -1.64
NHLRC3-201ENST00000379599 DMBT1Q9UGM3 2413 aaPredicted RBP4.81□□□□□ -1.64
NHLRC3-201ENST00000379599 TPRXLQ17RH7 258 aa4.81□□□□□ -1.64
NHLRC3-201ENST00000379599 H1FX-AS1Q4G0G2 97 aa4.8□□□□□ -1.64
NHLRC3-201ENST00000379599 WWC2-AS2Q96NR7 200 aa4.8□□□□□ -1.64
NHLRC3-201ENST00000379599 C10orf95Q9H7T3 257 aa4.8□□□□□ -1.64
NHLRC3-201ENST00000379599 KRTAP13-1Q8IUC0 172 aa4.78□□□□□ -1.64
NHLRC3-201ENST00000379599 KRTAP24-1Q3LI83 254 aa4.75□□□□□ -1.65
NHLRC3-201ENST00000379599 ANK2Q01484 3957 aa4.75□□□□□ -1.65
NHLRC3-201ENST00000379599 STAB2Q8WWQ8 2551 aa4.75□□□□□ -1.65
NHLRC3-201ENST00000379599 NBDYA0A0U1RRE5 68 aa4.74□□□□□ -1.65
NHLRC3-201ENST00000379599 MEGF8Q7Z7M0 2845 aa4.74□□□□□ -1.65
NHLRC3-201ENST00000379599 KRTAP10-11P60412 298 aa4.71□□□□□ -1.66
NHLRC3-201ENST00000379599 TGP01266 2768 aa4.71□□□□□ -1.66
NHLRC3-201ENST00000379599 A0A0D9SG42 100 aa4.7□□□□□ -1.66
NHLRC3-201ENST00000379599 COX6B2Q6YFQ2 88 aa4.68□□□□□ -1.66
NHLRC3-201ENST00000379599 KRTAP1-5Q9BYS1 174 aa4.68□□□□□ -1.66
NHLRC3-201ENST00000379599 RPL37P61927 97 aaKnown RBP4.67□□□□□ -1.66
NHLRC3-201ENST00000379599 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.65□□□□□ -1.66
NHLRC3-201ENST00000379599 APLNQ9ULZ1 77 aa4.64□□□□□ -1.67
NHLRC3-201ENST00000379599 UBE2DNLQ8IWF7 75 aa4.63□□□□□ -1.67
NHLRC3-201ENST00000379599 SEC61BP60468 96 aaKnown RBP4.62□□□□□ -1.67
NHLRC3-201ENST00000379599 SPACA4Q8TDM5 124 aa4.6□□□□□ -1.67
NHLRC3-201ENST00000379599 CMYA5Q8N3K9 4069 aa4.59□□□□□ -1.67
NHLRC3-201ENST00000379599 DNAH10Q8IVF4 4471 aa4.59□□□□□ -1.67
NHLRC3-201ENST00000379599 LYSTQ99698 3801 aa4.58□□□□□ -1.68
NHLRC3-201ENST00000379599 KRTAP3-1Q9BYR8 98 aa4.52□□□□□ -1.69
NHLRC3-201ENST00000379599 DNHD1Q96M86 4753 aa4.52□□□□□ -1.69
NHLRC3-201ENST00000379599 KRTAP13-4Q3LI77 160 aa4.51□□□□□ -1.69
NHLRC3-201ENST00000379599 HUWE1Q7Z6Z7 4374 aaKnown RBP4.51□□□□□ -1.69
NHLRC3-201ENST00000379599 DNAH1Q9P2D7 4330 aa4.51□□□□□ -1.69
NHLRC3-201ENST00000379599 S4R3F8 94 aa4.48□□□□□ -1.69
NHLRC3-201ENST00000379599 KRTAP13-2Q52LG2 175 aa4.45□□□□□ -1.7
NHLRC3-201ENST00000379599 DNAH8Q96JB1 4490 aa4.44□□□□□ -1.7
NHLRC3-201ENST00000379599 DNAH7Q8WXX0 4024 aa4.44□□□□□ -1.7
NHLRC3-201ENST00000379599 PLAC4Q8WY50 150 aa4.44□□□□□ -1.7
NHLRC3-201ENST00000379599 PRKDCP78527 4128 aaKnown RBP4.44□□□□□ -1.7
NHLRC3-201ENST00000379599 DNAH9Q9NYC9 4486 aa4.43□□□□□ -1.7
NHLRC3-201ENST00000379599 PLECQ15149 4684 aaKnown RBP4.43□□□□□ -1.7
NHLRC3-201ENST00000379599 KRTAP12-2P59991 146 aa4.43□□□□□ -1.7
NHLRC3-201ENST00000379599 KRTAP10-6P60371 365 aaPredicted RBP4.43□□□□□ -1.7
NHLRC3-201ENST00000379599 FRAS1Q86XX4 4008 aa4.43□□□□□ -1.7
NHLRC3-201ENST00000379599 DNAH3Q8TD57 4116 aa4.42□□□□□ -1.7
NHLRC3-201ENST00000379599 FBN3Q75N90 2809 aa4.4□□□□□ -1.7
NHLRC3-201ENST00000379599 C9orf92A6NGG3 77 aa4.4□□□□□ -1.7
NHLRC3-201ENST00000379599 LCE2BO14633 110 aa4.4□□□□□ -1.7
NHLRC3-201ENST00000379599 DNAH17Q9UFH2 4485 aa4.4□□□□□ -1.71
NHLRC3-201ENST00000379599 XP32Q5T750 250 aa4.39□□□□□ -1.71
NHLRC3-201ENST00000379599 Q6ZRN7 208 aaPredicted RBP4.38□□□□□ -1.71
NHLRC3-201ENST00000379599 STARD9Q9P2P6 4700 aa4.37□□□□□ -1.71
NHLRC3-201ENST00000379599 KMT2AQ03164 3969 aa4.34□□□□□ -1.71
NHLRC3-201ENST00000379599 KRTAP12-1P59990 96 aa4.33□□□□□ -1.72
NHLRC3-201ENST00000379599 CAMK2N1Q7Z7J9 78 aa4.29□□□□□ -1.72
NHLRC3-201ENST00000379599 KRTAP10-8P60410 259 aa4.27□□□□□ -1.73
NHLRC3-201ENST00000379599 DNAH2Q9P225 4427 aa4.24□□□□□ -1.73
NHLRC3-201ENST00000379599 J3QL48 77 aa4.24□□□□□ -1.73
NHLRC3-201ENST00000379599 VPS13DQ5THJ4 4388 aa4.24□□□□□ -1.73
NHLRC3-201ENST00000379599 KRTAP1-4P0C5Y4 121 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms