RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 COA5Q86WW8 74 aa3.99□□□□□ -1.77
NEDD9-202ENST00000379446 TP53AIP1Q9HCN2 124 aa3.97□□□□□ -1.77
NEDD9-202ENST00000379446 Q8N9P0 234 aaPredicted RBP3.96□□□□□ -1.78
NEDD9-202ENST00000379446 AKAP9Q99996 3911 aa3.96□□□□□ -1.78
NEDD9-202ENST00000379446 TRRAPQ9Y4A5 3859 aa3.96□□□□□ -1.78
NEDD9-202ENST00000379446 LOC101927531A0A1B0GV80 90 aa3.96□□□□□ -1.78
NEDD9-202ENST00000379446 PANO1I0J062 215 aa3.96□□□□□ -1.78
NEDD9-202ENST00000379446 IGLV5-48A0A075B6I7 105 aa3.95□□□□□ -1.78
NEDD9-202ENST00000379446 ACYP2P14621 99 aa3.94□□□□□ -1.78
NEDD9-202ENST00000379446 ANK3Q12955 4377 aaKnown RBP3.94□□□□□ -1.78
NEDD9-202ENST00000379446 LCA10Q71F78 164 aa3.94□□□□□ -1.78
NEDD9-202ENST00000379446 MRPL34Q9BQ48 92 aaKnown RBP3.94□□□□□ -1.78
NEDD9-202ENST00000379446 A0A1B0GU69 56 aa3.93□□□□□ -1.78
NEDD9-202ENST00000379446 SPINK7P58062 85 aa3.92□□□□□ -1.78
NEDD9-202ENST00000379446 CYP4F30PQ9H0H9 118 aa3.91□□□□□ -1.78
NEDD9-202ENST00000379446 A0A1B0GVX0 72 aa3.91□□□□□ -1.78
NEDD9-202ENST00000379446 Q6ZRN7 208 aaPredicted RBP3.91□□□□□ -1.78
NEDD9-202ENST00000379446 CAMK2N1Q7Z7J9 78 aa3.9□□□□□ -1.78
NEDD9-202ENST00000379446 CDC42SE1Q9NRR8 79 aa3.9□□□□□ -1.78
NEDD9-202ENST00000379446 SPRR1AP35321 89 aa3.9□□□□□ -1.79
NEDD9-202ENST00000379446 KRTAP7-1Q8IUC3 87 aa3.9□□□□□ -1.79
NEDD9-202ENST00000379446 ADM2Q7Z4H4 148 aa3.89□□□□□ -1.79
NEDD9-202ENST00000379446 C8orf17Q9NRJ1 99 aa3.89□□□□□ -1.79
NEDD9-202ENST00000379446 KRTAP4-16G5E9R7 235 aaPredicted RBP3.89□□□□□ -1.79
NEDD9-202ENST00000379446 CSAG1Q6PB30 78 aa3.89□□□□□ -1.79
NEDD9-202ENST00000379446 A8MWP4 228 aa3.88□□□□□ -1.79
NEDD9-202ENST00000379446 H3BPC8 53 aa3.88□□□□□ -1.79
NEDD9-202ENST00000379446 A0A087X002 238 aa3.87□□□□□ -1.79
NEDD9-202ENST00000379446 ZCCHC13Q8WW36 166 aaKnown RBP3.87□□□□□ -1.79
NEDD9-202ENST00000379446 Q75L30 129 aa3.86□□□□□ -1.79
NEDD9-202ENST00000379446 PLAC4Q8WY50 150 aa3.85□□□□□ -1.79
NEDD9-202ENST00000379446 KRTAP11-1Q8IUC1 163 aa3.84□□□□□ -1.79
NEDD9-202ENST00000379446 SPANXA2-OT1Q8N9U9 137 aa3.84□□□□□ -1.8
NEDD9-202ENST00000379446 A6NN06 94 aa3.83□□□□□ -1.8
NEDD9-202ENST00000379446 SPINT4Q6UDR6 99 aa3.83□□□□□ -1.8
NEDD9-202ENST00000379446 C20orf166-AS1Q96NR2 134 aa3.83□□□□□ -1.8
NEDD9-202ENST00000379446 HRES1P13985 223 aa3.82□□□□□ -1.8
NEDD9-202ENST00000379446 COL7A1Q02388 2944 aa3.81□□□□□ -1.8
NEDD9-202ENST00000379446 KRTAP29-1A8MX34 341 aaPredicted RBP3.81□□□□□ -1.8
NEDD9-202ENST00000379446 A0A0D9SG42 100 aa3.8□□□□□ -1.8
NEDD9-202ENST00000379446 UQCR11O14957 56 aa3.8□□□□□ -1.8
NEDD9-202ENST00000379446 MIR22HGQ0VDD5 57 aa3.8□□□□□ -1.8
NEDD9-202ENST00000379446 LINC01558Q9Y6Z2 57 aa3.8□□□□□ -1.8
NEDD9-202ENST00000379446 CRIPTQ9P021 101 aa3.8□□□□□ -1.8
NEDD9-202ENST00000379446 R4GN34 69 aa3.8□□□□□ -1.8
NEDD9-202ENST00000379446 LINC00472Q9H8W2 130 aa3.78□□□□□ -1.8
NEDD9-202ENST00000379446 MMP24-AS1A0A0U1RRL7 71 aa3.78□□□□□ -1.81
NEDD9-202ENST00000379446 S4R3F8 94 aa3.77□□□□□ -1.81
NEDD9-202ENST00000379446 SPRR1BP22528 89 aa3.75□□□□□ -1.81
NEDD9-202ENST00000379446 A0A1B0GVY2 172 aa3.75□□□□□ -1.81
NEDD9-202ENST00000379446 KRTAP3-3Q9BYR6 98 aa3.73□□□□□ -1.81
NEDD9-202ENST00000379446 KRTAP3-2Q9BYR7 98 aa3.73□□□□□ -1.81
NEDD9-202ENST00000379446 CSMD3Q7Z407 3707 aa3.73□□□□□ -1.81
NEDD9-202ENST00000379446 NOTCH2NLQ7Z3S9 236 aa3.73□□□□□ -1.81
NEDD9-202ENST00000379446 KRTAP10-10P60014 251 aa3.71□□□□□ -1.82
NEDD9-202ENST00000379446 RPS29P62273 56 aaKnown RBP3.7□□□□□ -1.82
NEDD9-202ENST00000379446 A0A0A0MQY5 61 aa3.69□□□□□ -1.82
NEDD9-202ENST00000379446 KRTAP13-2Q52LG2 175 aa3.69□□□□□ -1.82
NEDD9-202ENST00000379446 Q5W150 140 aa3.69□□□□□ -1.82
NEDD9-202ENST00000379446 M0QZ58 72 aa3.68□□□□□ -1.82
NEDD9-202ENST00000379446 KRTAP13-1Q8IUC0 172 aa3.68□□□□□ -1.82
NEDD9-202ENST00000379446 RPL37P61927 97 aaKnown RBP3.67□□□□□ -1.82
NEDD9-202ENST00000379446 LINC00483Q53H64 154 aa3.65□□□□□ -1.82
NEDD9-202ENST00000379446 TPRXLQ17RH7 258 aa3.64□□□□□ -1.83
NEDD9-202ENST00000379446 KRTAP4-5Q9BYR2 181 aa3.63□□□□□ -1.83
NEDD9-202ENST00000379446 ANK2Q01484 3957 aa3.62□□□□□ -1.83
NEDD9-202ENST00000379446 H1FX-AS1Q4G0G2 97 aa3.61□□□□□ -1.83
NEDD9-202ENST00000379446 HUWE1Q7Z6Z7 4374 aaKnown RBP3.61□□□□□ -1.83
NEDD9-202ENST00000379446 XP32Q5T750 250 aa3.6□□□□□ -1.83
NEDD9-202ENST00000379446 SPATA8Q6RVD6 105 aa3.6□□□□□ -1.83
NEDD9-202ENST00000379446 DNAH10Q8IVF4 4471 aa3.6□□□□□ -1.83
NEDD9-202ENST00000379446 MEGF8Q7Z7M0 2845 aa3.59□□□□□ -1.83
NEDD9-202ENST00000379446 DNHD1Q96M86 4753 aa3.58□□□□□ -1.84
NEDD9-202ENST00000379446 DMAC1Q96GE9 116 aa3.58□□□□□ -1.84
NEDD9-202ENST00000379446 CMYA5Q8N3K9 4069 aa3.57□□□□□ -1.84
NEDD9-202ENST00000379446 A0A1B0GU33 70 aa3.57□□□□□ -1.84
NEDD9-202ENST00000379446 DNAH3Q8TD57 4116 aa3.56□□□□□ -1.84
NEDD9-202ENST00000379446 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
NEDD9-202ENST00000379446 KRTAP10-8P60410 259 aa3.56□□□□□ -1.84
NEDD9-202ENST00000379446 ASB16-AS1Q495Z4 193 aa3.56□□□□□ -1.84
NEDD9-202ENST00000379446 KRTAP1-4P0C5Y4 121 aa3.56□□□□□ -1.84
NEDD9-202ENST00000379446 ROMO1P60602 79 aa3.55□□□□□ -1.84
NEDD9-202ENST00000379446 KRTAP25-1Q3LHN0 102 aa3.53□□□□□ -1.84
NEDD9-202ENST00000379446 A8MUU9 505 aa3.53□□□□□ -1.84
NEDD9-202ENST00000379446 LYSTQ99698 3801 aa3.52□□□□□ -1.85
NEDD9-202ENST00000379446 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
NEDD9-202ENST00000379446 KRTAP13-3Q3SY46 172 aa3.5□□□□□ -1.85
NEDD9-202ENST00000379446 PLECQ15149 4684 aaKnown RBP3.5□□□□□ -1.85
NEDD9-202ENST00000379446 DNAH9Q9NYC9 4486 aa3.49□□□□□ -1.85
NEDD9-202ENST00000379446 PRO2289Q9P1D8 64 aa3.47□□□□□ -1.85
NEDD9-202ENST00000379446 C10orf95Q9H7T3 257 aa3.45□□□□□ -1.86
NEDD9-202ENST00000379446 H0YAA0 97 aa3.44□□□□□ -1.86
NEDD9-202ENST00000379446 KRTAP16-1A8MUX0 517 aa3.43□□□□□ -1.86
NEDD9-202ENST00000379446 DNAH1Q9P2D7 4330 aa3.43□□□□□ -1.86
NEDD9-202ENST00000379446 STARD9Q9P2P6 4700 aa3.42□□□□□ -1.86
NEDD9-202ENST00000379446 DNAH7Q8WXX0 4024 aa3.41□□□□□ -1.86
NEDD9-202ENST00000379446 P0C880 135 aa3.38□□□□□ -1.87
NEDD9-202ENST00000379446 MT1HL1P0DM35 61 aa3.38□□□□□ -1.87
NEDD9-202ENST00000379446 DNAH11Q96DT5 4516 aa3.38□□□□□ -1.87
NEDD9-202ENST00000379446 DNAH8Q96JB1 4490 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms