RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 A0A1B0GVX0 72 aa10.03□□□□□ -0.8
SSU72-203ENST00000378725 PCOTHQ58A44 107 aa10.03□□□□□ -0.8
SSU72-203ENST00000378725 IGHV6-1A0A0B4J1U7 121 aa10.02□□□□□ -0.81
SSU72-203ENST00000378725 ETDBQ3ZM63 59 aa10.02□□□□□ -0.81
SSU72-203ENST00000378725 LCE2DQ5TA82 110 aaPredicted RBP10.02□□□□□ -0.81
SSU72-203ENST00000378725 NOTCH2NLQ7Z3S9 236 aa10.02□□□□□ -0.81
SSU72-203ENST00000378725 C20orf166-AS1Q96NR2 134 aa10.02□□□□□ -0.81
SSU72-203ENST00000378725 KRTAP4-1Q9BYQ7 146 aa10.02□□□□□ -0.81
SSU72-203ENST00000378725 KRTAP16-1A8MUX0 517 aa10□□□□□ -0.81
SSU72-203ENST00000378725 C8orf87E5RJ46 101 aa10□□□□□ -0.81
SSU72-203ENST00000378725 MUC2Q02817 5179 aa9.99□□□□□ -0.81
SSU72-203ENST00000378725 A8MUU9 505 aa9.99□□□□□ -0.81
SSU72-203ENST00000378725 A8MWP4 228 aa9.99□□□□□ -0.81
SSU72-203ENST00000378725 NDUFB1O75438 58 aa9.98□□□□□ -0.81
SSU72-203ENST00000378725 A0A1B0GV90 55 aa9.97□□□□□ -0.81
SSU72-203ENST00000378725 IGKV3D-7A0A0C4DH55 119 aa9.96□□□□□ -0.82
SSU72-203ENST00000378725 Q6ZVQ6 151 aa9.96□□□□□ -0.82
SSU72-203ENST00000378725 LINC00846Q9NV44 126 aa9.94□□□□□ -0.82
SSU72-203ENST00000378725 ATP11AUNQ6ZP68 121 aa9.93□□□□□ -0.82
SSU72-203ENST00000378725 PRR15Q8IV56 129 aa9.93□□□□□ -0.82
SSU72-203ENST00000378725 BPY2O14599 106 aa9.91□□□□□ -0.82
SSU72-203ENST00000378725 C8orf17Q9NRJ1 99 aa9.9□□□□□ -0.82
SSU72-203ENST00000378725 UBL5Q9BZL1 73 aa9.89□□□□□ -0.83
SSU72-203ENST00000378725 A0A0U1RQV1 116 aa9.88□□□□□ -0.83
SSU72-203ENST00000378725 K7EQZ3 153 aa9.85□□□□□ -0.83
SSU72-203ENST00000378725 Q8N9P0 234 aaPredicted RBP9.83□□□□□ -0.84
SSU72-203ENST00000378725 MMP24-AS1A0A0U1RRL7 71 aa9.82□□□□□ -0.84
SSU72-203ENST00000378725 ACYP1P07311 99 aa9.8□□□□□ -0.84
SSU72-203ENST00000378725 FAM240AA0A1B0GVK7 77 aa9.78□□□□□ -0.84
SSU72-203ENST00000378725 Q8N9L7 120 aa9.78□□□□□ -0.84
SSU72-203ENST00000378725 TMEM254Q8TBM7 123 aa9.77□□□□□ -0.85
SSU72-203ENST00000378725 hDV103S1A0JD37 113 aa9.76□□□□□ -0.85
SSU72-203ENST00000378725 MRPL34Q9BQ48 92 aaKnown RBP9.75□□□□□ -0.85
SSU72-203ENST00000378725 CXCL6P80162 114 aa9.74□□□□□ -0.85
SSU72-203ENST00000378725 KRTAP19-2Q3LHN2 52 aa9.74□□□□□ -0.85
SSU72-203ENST00000378725 ZCCHC13Q8WW36 166 aaKnown RBP9.72□□□□□ -0.85
SSU72-203ENST00000378725 FAT4Q6V0I7 4981 aa9.71□□□□□ -0.85
SSU72-203ENST00000378725 LCE2CQ5TA81 110 aa9.7□□□□□ -0.86
SSU72-203ENST00000378725 LCE2AQ5TA79 106 aaPredicted RBP9.68□□□□□ -0.86
SSU72-203ENST00000378725 CASC2Q6XLA1 102 aa9.68□□□□□ -0.86
SSU72-203ENST00000378725 WFDC13Q8IUB5 93 aa9.67□□□□□ -0.86
SSU72-203ENST00000378725 HCG22E2RYF7 251 aa9.64□□□□□ -0.87
SSU72-203ENST00000378725 NDUFS5O43920 106 aa9.61□□□□□ -0.87
SSU72-203ENST00000378725 ATP5EP2Q5VTU8 51 aa9.61□□□□□ -0.87
SSU72-203ENST00000378725 J3QR89 54 aa9.58□□□□□ -0.88
SSU72-203ENST00000378725 LINC00643Q86TS7 51 aa9.58□□□□□ -0.88
SSU72-203ENST00000378725 SPINK7P58062 85 aa9.57□□□□□ -0.88
SSU72-203ENST00000378725 HRES1P13985 223 aa9.56□□□□□ -0.88
SSU72-203ENST00000378725 Q5W150 140 aa9.54□□□□□ -0.88
SSU72-203ENST00000378725 COX6B2Q6YFQ2 88 aa9.54□□□□□ -0.88
SSU72-203ENST00000378725 MPLKIPQ8TAP9 179 aa9.54□□□□□ -0.88
SSU72-203ENST00000378725 MT1HP80294 61 aa9.53□□□□□ -0.88
SSU72-203ENST00000378725 KRTAP3-3Q9BYR6 98 aa9.52□□□□□ -0.89
SSU72-203ENST00000378725 KRTAP3-2Q9BYR7 98 aa9.52□□□□□ -0.89
SSU72-203ENST00000378725 HIST1H4AP62805 103 aaKnown RBP9.47□□□□□ -0.89
SSU72-203ENST00000378725 KRTAP9-2Q9BYQ4 174 aa9.47□□□□□ -0.89
SSU72-203ENST00000378725 RBM12B-AS1Q9P1G2 102 aa9.47□□□□□ -0.89
SSU72-203ENST00000378725 TP53AIP1Q9HCN2 124 aa9.46□□□□□ -0.9
SSU72-203ENST00000378725 A0A087WVE0 104 aa9.39□□□□□ -0.91
SSU72-203ENST00000378725 FAM236DA0A1B0GTK5 79 aa9.39□□□□□ -0.91
SSU72-203ENST00000378725 K7ERU9 68 aa9.39□□□□□ -0.91
SSU72-203ENST00000378725 FAM236CP0DP71 79 aa9.39□□□□□ -0.91
SSU72-203ENST00000378725 C7orf65Q6ZTY9 151 aa9.39□□□□□ -0.91
SSU72-203ENST00000378725 IGKV2D-30A0A075B6S6 120 aa9.38□□□□□ -0.91
SSU72-203ENST00000378725 IGKV2-30P06310 120 aa9.38□□□□□ -0.91
SSU72-203ENST00000378725 FLGP20930 4061 aaPredicted RBP9.35□□□□□ -0.91
SSU72-203ENST00000378725 KRTAP9-6A0A140TA67 174 aa9.34□□□□□ -0.91
SSU72-203ENST00000378725 M0R2T5 61 aa9.34□□□□□ -0.91
SSU72-203ENST00000378725 UQCRQO14949 82 aa9.29□□□□□ -0.92
SSU72-203ENST00000378725 KRTAP10-6P60371 365 aaPredicted RBP9.29□□□□□ -0.92
SSU72-203ENST00000378725 LORP23490 312 aaPredicted RBP9.28□□□□□ -0.92
SSU72-203ENST00000378725 TRAV22A0A0B4J277 110 aa9.27□□□□□ -0.93
SSU72-203ENST00000378725 IMUPQ9GZP8 106 aa9.25□□□□□ -0.93
SSU72-203ENST00000378725 MT-ATP8P03928 68 aa9.23□□□□□ -0.93
SSU72-203ENST00000378725 OCR1Q9BZK8 76 aa9.22□□□□□ -0.93
SSU72-203ENST00000378725 C4orf26Q17RF5 130 aa9.21□□□□□ -0.94
SSU72-203ENST00000378725 CYP4F30PQ9H0H9 118 aa9.21□□□□□ -0.94
SSU72-203ENST00000378725 LOC101927531A0A1B0GV80 90 aa9.2□□□□□ -0.94
SSU72-203ENST00000378725 H1FX-AS1Q4G0G2 97 aa9.19□□□□□ -0.94
SSU72-203ENST00000378725 H0Y9P7 68 aa9.18□□□□□ -0.94
SSU72-203ENST00000378725 ATOX1O00244 68 aa9.18□□□□□ -0.94
SSU72-203ENST00000378725 SCGB1A1P11684 91 aa9.13□□□□□ -0.95
SSU72-203ENST00000378725 KRTAP3-1Q9BYR8 98 aa9.13□□□□□ -0.95
SSU72-203ENST00000378725 C5orf47Q569G3 176 aa9.11□□□□□ -0.95
SSU72-203ENST00000378725 C1orf64Q8NEQ6 169 aa9.1□□□□□ -0.95
SSU72-203ENST00000378725 KRTAP9-8Q9BYQ0 159 aa9.1□□□□□ -0.95
SSU72-203ENST00000378725 MP68P56378 58 aa9.08□□□□□ -0.96
SSU72-203ENST00000378725 LINC00208Q96KT6 92 aa9.07□□□□□ -0.96
SSU72-203ENST00000378725 H3BPC8 53 aa9.04□□□□□ -0.96
SSU72-203ENST00000378725 FAM236AA0A1B0GUQ0 79 aa9.03□□□□□ -0.96
SSU72-203ENST00000378725 FAM236BA0A1B0GV22 79 aa9.03□□□□□ -0.96
SSU72-203ENST00000378725 SMIM20Q8N5G0 67 aa9□□□□□ -0.97
SSU72-203ENST00000378725 KLKP1Q107X0 134 aa8.99□□□□□ -0.97
SSU72-203ENST00000378725 MT2AP02795 61 aa8.98□□□□□ -0.97
SSU72-203ENST00000378725 TRAV7A0A075B6U4 112 aa8.97□□□□□ -0.97
SSU72-203ENST00000378725 S4R3F8 94 aa8.94□□□□□ -0.98
SSU72-203ENST00000378725 MT1FP04733 61 aa8.91□□□□□ -0.98
SSU72-203ENST00000378725 FSIP2Q5CZC0 6907 aa8.9□□□□□ -0.98
SSU72-203ENST00000378725 LCA10Q71F78 164 aa8.9□□□□□ -0.98
SSU72-203ENST00000378725 A8MUN3 132 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms