RNA–Protein interactions for RNA: ENST00000378565.9

ITM2B-202, Transcript of integral membrane protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2B, Length 10,137 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2B-202ENST00000378565 LAMA1P25391 3075 aa6.56□□□□□ -1.36
ITM2B-202ENST00000378565 HTTP42858 3142 aa6.56□□□□□ -1.36
ITM2B-202ENST00000378565 C10orf95Q9H7T3 257 aa6.54□□□□□ -1.36
ITM2B-202ENST00000378565 TNRC18O15417 2968 aaPredicted RBP6.54□□□□□ -1.36
ITM2B-202ENST00000378565 KRTAP11-1Q8IUC1 163 aa6.54□□□□□ -1.36
ITM2B-202ENST00000378565 NOTCH2NLQ7Z3S9 236 aa6.53□□□□□ -1.36
ITM2B-202ENST00000378565 DCHS2Q6V1P9 2916 aa6.5□□□□□ -1.37
ITM2B-202ENST00000378565 SRRM2Q9UQ35 2752 aaKnown RBP6.5□□□□□ -1.37
ITM2B-202ENST00000378565 Q5VSD8 79 aa6.5□□□□□ -1.37
ITM2B-202ENST00000378565 ZANQ9Y493 2812 aa6.48□□□□□ -1.37
ITM2B-202ENST00000378565 RPS29P62273 56 aaKnown RBP6.47□□□□□ -1.37
ITM2B-202ENST00000378565 BOD1L1Q8NFC6 3051 aa6.46□□□□□ -1.37
ITM2B-202ENST00000378565 DMXL1Q9Y485 3027 aa6.46□□□□□ -1.37
ITM2B-202ENST00000378565 PP632Q6XCG6 107 aa6.45□□□□□ -1.38
ITM2B-202ENST00000378565 TNP1P09430 55 aa6.44□□□□□ -1.38
ITM2B-202ENST00000378565 COL6A3P12111 3177 aa6.44□□□□□ -1.38
ITM2B-202ENST00000378565 KRTAP10-1P60331 282 aa6.43□□□□□ -1.38
ITM2B-202ENST00000378565 ATMQ13315 3056 aa6.43□□□□□ -1.38
ITM2B-202ENST00000378565 LAMA3Q16787 3333 aa6.43□□□□□ -1.38
ITM2B-202ENST00000378565 ADGRG4Q8IZF6 3080 aa6.42□□□□□ -1.38
ITM2B-202ENST00000378565 FBN2P35556 2912 aa6.4□□□□□ -1.38
ITM2B-202ENST00000378565 KRTAP10-2P60368 255 aa6.4□□□□□ -1.38
ITM2B-202ENST00000378565 BRCA2P51587 3418 aa6.39□□□□□ -1.39
ITM2B-202ENST00000378565 DNAH14Q0VDD8 3507 aa6.39□□□□□ -1.39
ITM2B-202ENST00000378565 CELSR1Q9NYQ6 3014 aa6.34□□□□□ -1.39
ITM2B-202ENST00000378565 VWFP04275 2813 aa6.32□□□□□ -1.4
ITM2B-202ENST00000378565 USP34Q70CQ2 3546 aa6.32□□□□□ -1.4
ITM2B-202ENST00000378565 P0C880 135 aa6.31□□□□□ -1.4
ITM2B-202ENST00000378565 VCANP13611 3396 aa6.27□□□□□ -1.41
ITM2B-202ENST00000378565 H0YAA0 97 aa6.27□□□□□ -1.41
ITM2B-202ENST00000378565 MXRA5Q9NR99 2828 aa6.26□□□□□ -1.41
ITM2B-202ENST00000378565 TENM4Q6N022 2769 aa6.26□□□□□ -1.41
ITM2B-202ENST00000378565 Q6ZRN7 208 aaPredicted RBP6.25□□□□□ -1.41
ITM2B-202ENST00000378565 CFAP47Q6ZTR5 3102 aa6.25□□□□□ -1.41
ITM2B-202ENST00000378565 PKD1L1Q8TDX9 2849 aa6.25□□□□□ -1.41
ITM2B-202ENST00000378565 KRTAP13-1Q8IUC0 172 aa6.25□□□□□ -1.41
ITM2B-202ENST00000378565 KRTAP13-2Q52LG2 175 aa6.22□□□□□ -1.41
ITM2B-202ENST00000378565 KRTAP7-1Q8IUC3 87 aa6.2□□□□□ -1.42
ITM2B-202ENST00000378565 HRNRQ86YZ3 2850 aaPredicted RBP6.2□□□□□ -1.42
ITM2B-202ENST00000378565 CDH23Q9H251 3354 aa6.17□□□□□ -1.42
ITM2B-202ENST00000378565 SPEGQ15772 3267 aa6.1□□□□□ -1.43
ITM2B-202ENST00000378565 KRTAP10-8P60410 259 aa6.09□□□□□ -1.43
ITM2B-202ENST00000378565 COL7A1Q02388 2944 aa6.05□□□□□ -1.44
ITM2B-202ENST00000378565 MYO15AQ9UKN7 3530 aa6.03□□□□□ -1.44
ITM2B-202ENST00000378565 TENM2Q9NT68 2774 aa6.01□□□□□ -1.45
ITM2B-202ENST00000378565 WDFY3Q8IZQ1 3526 aa5.97□□□□□ -1.45
ITM2B-202ENST00000378565 EYSQ5T1H1 3165 aa5.95□□□□□ -1.46
ITM2B-202ENST00000378565 PRO2289Q9P1D8 64 aa5.93□□□□□ -1.46
ITM2B-202ENST00000378565 XP32Q5T750 250 aa5.92□□□□□ -1.46
ITM2B-202ENST00000378565 SPTBN5Q9NRC6 3674 aaKnown RBP5.92□□□□□ -1.46
ITM2B-202ENST00000378565 SZT2Q5T011 3432 aa5.89□□□□□ -1.47
ITM2B-202ENST00000378565 MEGF8Q7Z7M0 2845 aa5.89□□□□□ -1.47
ITM2B-202ENST00000378565 ZFHX3Q15911 3703 aa5.88□□□□□ -1.47
ITM2B-202ENST00000378565 ZFHX4Q86UP3 3567 aa5.84□□□□□ -1.47
ITM2B-202ENST00000378565 KRTAP1-4P0C5Y4 121 aa5.82□□□□□ -1.48
ITM2B-202ENST00000378565 ASPMQ8IZT6 3477 aa5.81□□□□□ -1.48
ITM2B-202ENST00000378565 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
ITM2B-202ENST00000378565 LOC400499M0QZD8 3231 aa5.79□□□□□ -1.48
ITM2B-202ENST00000378565 TPRXLQ17RH7 258 aa5.79□□□□□ -1.48
ITM2B-202ENST00000378565 FBN1P35555 2871 aaKnown RBP5.78□□□□□ -1.48
ITM2B-202ENST00000378565 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
ITM2B-202ENST00000378565 A0A1B0GVY2 172 aa5.77□□□□□ -1.49
ITM2B-202ENST00000378565 FBN3Q75N90 2809 aa5.77□□□□□ -1.49
ITM2B-202ENST00000378565 SMG1Q96Q15 3661 aaKnown RBP5.74□□□□□ -1.49
ITM2B-202ENST00000378565 LAMA5O15230 3695 aa5.74□□□□□ -1.49
ITM2B-202ENST00000378565 KRTAP10-10P60014 251 aa5.73□□□□□ -1.49
ITM2B-202ENST00000378565 KRTAP13-3Q3SY46 172 aa5.73□□□□□ -1.49
ITM2B-202ENST00000378565 NBPF19A0A087WUL8 3843 aa5.7□□□□□ -1.5
ITM2B-202ENST00000378565 RELNP78509 3460 aa5.68□□□□□ -1.5
ITM2B-202ENST00000378565 INE1O15225 51 aa5.67□□□□□ -1.5
ITM2B-202ENST00000378565 KRTAP12-1P59990 96 aa5.65□□□□□ -1.5
ITM2B-202ENST00000378565 OTOGQ6ZRI0 2925 aa5.64□□□□□ -1.51
ITM2B-202ENST00000378565 SPENQ96T58 3664 aaKnown RBP5.64□□□□□ -1.51
ITM2B-202ENST00000378565 DMDP11532 3685 aa5.63□□□□□ -1.51
ITM2B-202ENST00000378565 DCHS1Q96JQ0 3298 aa5.61□□□□□ -1.51
ITM2B-202ENST00000378565 CSMD1Q96PZ7 3565 aa5.59□□□□□ -1.51
ITM2B-202ENST00000378565 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
ITM2B-202ENST00000378565 CUBNO60494 3623 aa5.43□□□□□ -1.54
ITM2B-202ENST00000378565 VPS13CQ709C8 3753 aa5.4□□□□□ -1.55
ITM2B-202ENST00000378565 TRRAPQ9Y4A5 3859 aa5.36□□□□□ -1.55
ITM2B-202ENST00000378565 KRTAP3-1Q9BYR8 98 aa5.36□□□□□ -1.55
ITM2B-202ENST00000378565 KRTAP10-6P60371 365 aaPredicted RBP5.35□□□□□ -1.55
ITM2B-202ENST00000378565 KRTAP21-3Q3LHN1 58 aa5.34□□□□□ -1.56
ITM2B-202ENST00000378565 SVEP1Q4LDE5 3571 aa5.32□□□□□ -1.56
ITM2B-202ENST00000378565 MUC3AQ02505 3323 aa5.22□□□□□ -1.57
ITM2B-202ENST00000378565 CSMD3Q7Z407 3707 aa5.21□□□□□ -1.57
ITM2B-202ENST00000378565 AKAP9Q99996 3911 aa5.2□□□□□ -1.58
ITM2B-202ENST00000378565 KRTAP10-12P60413 245 aa5.17□□□□□ -1.58
ITM2B-202ENST00000378565 KRTAP23-1A1A580 65 aa5.12□□□□□ -1.59
ITM2B-202ENST00000378565 KRTAP3-2Q9BYR7 98 aa5.08□□□□□ -1.6
ITM2B-202ENST00000378565 KRTAP12-3P60328 96 aa5.04□□□□□ -1.6
ITM2B-202ENST00000378565 KRTAP3-3Q9BYR6 98 aa5.03□□□□□ -1.6
ITM2B-202ENST00000378565 CRCT1Q9UGL9 99 aa5.02□□□□□ -1.61
ITM2B-202ENST00000378565 ALMS1Q8TCU4 4167 aa4.99□□□□□ -1.61
ITM2B-202ENST00000378565 CSMD2Q7Z408 3487 aa4.97□□□□□ -1.61
ITM2B-202ENST00000378565 LCE3AQ5TA76 89 aa4.88□□□□□ -1.63
ITM2B-202ENST00000378565 BSNQ9UPA5 3926 aa4.85□□□□□ -1.63
ITM2B-202ENST00000378565 KRTAP10-5P60370 271 aa4.84□□□□□ -1.64
ITM2B-202ENST00000378565 LYSTQ99698 3801 aa4.79□□□□□ -1.64
ITM2B-202ENST00000378565 MT1HL1P0DM35 61 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms