RNA–Protein interactions for RNA: ENST00000378391.6

PRDM16-203, Transcript of PR/SET domain 16, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRDM16, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-203ENST00000378391 BSNQ9UPA5 3926 aa8.78□□□□□ -1
PRDM16-203ENST00000378391 CELSR1Q9NYQ6 3014 aa8.78□□□□□ -1
PRDM16-203ENST00000378391 BAHCC1Q9P281 2608 aa8.78□□□□□ -1
PRDM16-203ENST00000378391 NOTCH1P46531 2555 aa8.76□□□□□ -1.01
PRDM16-203ENST00000378391 PLAC4Q8WY50 150 aa8.75□□□□□ -1.01
PRDM16-203ENST00000378391 TEP1Q99973 2627 aaKnown RBP8.74□□□□□ -1.01
PRDM16-203ENST00000378391 SPATA8Q6RVD6 105 aa8.73□□□□□ -1.01
PRDM16-203ENST00000378391 LCE6AA0A183 80 aa8.73□□□□□ -1.01
PRDM16-203ENST00000378391 FBN2P35556 2912 aa8.72□□□□□ -1.01
PRDM16-203ENST00000378391 Q6ZSA8 131 aa8.71□□□□□ -1.01
PRDM16-203ENST00000378391 CRYBG3Q68DQ2 2970 aa8.71□□□□□ -1.01
PRDM16-203ENST00000378391 MXRA5Q9NR99 2828 aa8.68□□□□□ -1.02
PRDM16-203ENST00000378391 C20orf166-AS1Q96NR2 134 aa8.67□□□□□ -1.02
PRDM16-203ENST00000378391 KRTAP1-5Q9BYS1 174 aa8.67□□□□□ -1.02
PRDM16-203ENST00000378391 KRTAP29-1A8MX34 341 aaPredicted RBP8.67□□□□□ -1.02
PRDM16-203ENST00000378391 Q6ZR54 194 aa8.64□□□□□ -1.03
PRDM16-203ENST00000378391 KRTAP7-1Q8IUC3 87 aa8.64□□□□□ -1.03
PRDM16-203ENST00000378391 COL6A5A8TX70 2615 aa8.63□□□□□ -1.03
PRDM16-203ENST00000378391 NF1P21359 2839 aa8.61□□□□□ -1.03
PRDM16-203ENST00000378391 S4R3F8 94 aa8.59□□□□□ -1.04
PRDM16-203ENST00000378391 APCP25054 2843 aa8.58□□□□□ -1.04
PRDM16-203ENST00000378391 DMBT1Q9UGM3 2413 aaPredicted RBP8.57□□□□□ -1.04
PRDM16-203ENST00000378391 CELSR2Q9HCU4 2923 aa8.56□□□□□ -1.04
PRDM16-203ENST00000378391 A0A087X002 238 aa8.55□□□□□ -1.04
PRDM16-203ENST00000378391 M0R2T5 61 aa8.55□□□□□ -1.04
PRDM16-203ENST00000378391 R4GN34 69 aa8.55□□□□□ -1.04
PRDM16-203ENST00000378391 A8MU10 97 aa8.53□□□□□ -1.04
PRDM16-203ENST00000378391 UBR5O95071 2799 aaPredicted RBP8.53□□□□□ -1.04
PRDM16-203ENST00000378391 A8MUU9 505 aa8.52□□□□□ -1.05
PRDM16-203ENST00000378391 KRTAP11-1Q8IUC1 163 aa8.49□□□□□ -1.05
PRDM16-203ENST00000378391 STAB2Q8WWQ8 2551 aa8.46□□□□□ -1.05
PRDM16-203ENST00000378391 ZFHX3Q15911 3703 aa8.46□□□□□ -1.06
PRDM16-203ENST00000378391 PANO1I0J062 215 aa8.45□□□□□ -1.06
PRDM16-203ENST00000378391 CUBNO60494 3623 aa8.44□□□□□ -1.06
PRDM16-203ENST00000378391 KRTAP10-1P60331 282 aa8.43□□□□□ -1.06
PRDM16-203ENST00000378391 ITPR2Q14571 2701 aa8.4□□□□□ -1.06
PRDM16-203ENST00000378391 KRTAP10-2P60368 255 aa8.4□□□□□ -1.07
PRDM16-203ENST00000378391 HIVEP1P15822 2718 aa8.39□□□□□ -1.07
PRDM16-203ENST00000378391 NOTCH2NLQ7Z3S9 236 aa8.38□□□□□ -1.07
PRDM16-203ENST00000378391 VPS13CQ709C8 3753 aa8.37□□□□□ -1.07
PRDM16-203ENST00000378391 NSD1Q96L73 2696 aaPredicted RBP8.37□□□□□ -1.07
PRDM16-203ENST00000378391 M0QZ58 72 aa8.36□□□□□ -1.07
PRDM16-203ENST00000378391 C10orf95Q9H7T3 257 aa8.34□□□□□ -1.07
PRDM16-203ENST00000378391 CSMD2Q7Z408 3487 aa8.33□□□□□ -1.08
PRDM16-203ENST00000378391 NIPBLQ6KC79 2804 aaeCLIP8.32□□□□□ -1.08
PRDM16-203ENST00000378391 KRTAP13-1Q8IUC0 172 aa8.29□□□□□ -1.08
PRDM16-203ENST00000378391 PP632Q6XCG6 107 aa8.27□□□□□ -1.09
PRDM16-203ENST00000378391 Q5VSD8 79 aa8.27□□□□□ -1.09
PRDM16-203ENST00000378391 RPS29P62273 56 aaKnown RBP8.24□□□□□ -1.09
PRDM16-203ENST00000378391 Q6ZRN7 208 aaPredicted RBP8.23□□□□□ -1.09
PRDM16-203ENST00000378391 KMT2BQ9UMN6 2715 aaPredicted RBP8.18□□□□□ -1.1
PRDM16-203ENST00000378391 VWFP04275 2813 aa8.13□□□□□ -1.11
PRDM16-203ENST00000378391 TENM3Q9P273 2699 aa8.12□□□□□ -1.11
PRDM16-203ENST00000378391 KRTAP13-2Q52LG2 175 aa8.11□□□□□ -1.11
PRDM16-203ENST00000378391 ANK3Q12955 4377 aaKnown RBP8.11□□□□□ -1.11
PRDM16-203ENST00000378391 PDZD2O15018 2839 aa8.1□□□□□ -1.11
PRDM16-203ENST00000378391 KRTAP21-3Q3LHN1 58 aa8.1□□□□□ -1.11
PRDM16-203ENST00000378391 NBPF19A0A087WUL8 3843 aa8.09□□□□□ -1.11
PRDM16-203ENST00000378391 TENM1Q9UKZ4 2725 aa8.08□□□□□ -1.12
PRDM16-203ENST00000378391 P0C880 135 aa8.07□□□□□ -1.12
PRDM16-203ENST00000378391 AKAP9Q99996 3911 aa8.03□□□□□ -1.12
PRDM16-203ENST00000378391 TENM4Q6N022 2769 aa7.99□□□□□ -1.13
PRDM16-203ENST00000378391 PKD1L1Q8TDX9 2849 aa7.94□□□□□ -1.14
PRDM16-203ENST00000378391 TNP1P09430 55 aa7.94□□□□□ -1.14
PRDM16-203ENST00000378391 ZNF469Q96JG9 3925 aaPredicted RBP7.92□□□□□ -1.14
PRDM16-203ENST00000378391 TRRAPQ9Y4A5 3859 aa7.88□□□□□ -1.15
PRDM16-203ENST00000378391 KRTAP13-3Q3SY46 172 aa7.86□□□□□ -1.15
PRDM16-203ENST00000378391 OTOGQ6ZRI0 2925 aa7.81□□□□□ -1.16
PRDM16-203ENST00000378391 KRTAP10-8P60410 259 aa7.78□□□□□ -1.16
PRDM16-203ENST00000378391 FBN1P35555 2871 aaKnown RBP7.73□□□□□ -1.17
PRDM16-203ENST00000378391 KRTAP1-4P0C5Y4 121 aa7.73□□□□□ -1.17
PRDM16-203ENST00000378391 SRRM2Q9UQ35 2752 aaKnown RBP7.73□□□□□ -1.17
PRDM16-203ENST00000378391 H0YAA0 97 aa7.69□□□□□ -1.18
PRDM16-203ENST00000378391 TGP01266 2768 aa7.63□□□□□ -1.19
PRDM16-203ENST00000378391 XP32Q5T750 250 aa7.6□□□□□ -1.19
PRDM16-203ENST00000378391 HUWE1Q7Z6Z7 4374 aaKnown RBP7.55□□□□□ -1.2
PRDM16-203ENST00000378391 TENM2Q9NT68 2774 aa7.52□□□□□ -1.21
PRDM16-203ENST00000378391 CSMD3Q7Z407 3707 aa7.45□□□□□ -1.22
PRDM16-203ENST00000378391 INE1O15225 51 aa7.43□□□□□ -1.22
PRDM16-203ENST00000378391 TPRXLQ17RH7 258 aa7.43□□□□□ -1.22
PRDM16-203ENST00000378391 DNAH10Q8IVF4 4471 aa7.38□□□□□ -1.23
PRDM16-203ENST00000378391 PRO2289Q9P1D8 64 aa7.36□□□□□ -1.23
PRDM16-203ENST00000378391 FBN3Q75N90 2809 aa7.33□□□□□ -1.24
PRDM16-203ENST00000378391 COL7A1Q02388 2944 aa7.33□□□□□ -1.24
PRDM16-203ENST00000378391 KRTAP3-1Q9BYR8 98 aa7.32□□□□□ -1.24
PRDM16-203ENST00000378391 MEGF8Q7Z7M0 2845 aa7.29□□□□□ -1.24
PRDM16-203ENST00000378391 A0A1B0GVY2 172 aa7.28□□□□□ -1.24
PRDM16-203ENST00000378391 KRTAP23-1A1A580 65 aa7.28□□□□□ -1.24
PRDM16-203ENST00000378391 DNAH1Q9P2D7 4330 aa7.2□□□□□ -1.26
PRDM16-203ENST00000378391 DNAH9Q9NYC9 4486 aa7.19□□□□□ -1.26
PRDM16-203ENST00000378391 KRTAP10-10P60014 251 aa7.16□□□□□ -1.26
PRDM16-203ENST00000378391 KRTAP12-2P59991 146 aa7.15□□□□□ -1.26
PRDM16-203ENST00000378391 PLECQ15149 4684 aaKnown RBP7.15□□□□□ -1.27
PRDM16-203ENST00000378391 KRTAP15-1Q3LI76 137 aa7.14□□□□□ -1.27
PRDM16-203ENST00000378391 ANK2Q01484 3957 aa7.13□□□□□ -1.27
PRDM16-203ENST00000378391 ALMS1Q8TCU4 4167 aa7.12□□□□□ -1.27
PRDM16-203ENST00000378391 KRTAP13-4Q3LI77 160 aa7.09□□□□□ -1.28
PRDM16-203ENST00000378391 DNAH3Q8TD57 4116 aa7.08□□□□□ -1.28
PRDM16-203ENST00000378391 KRTAP12-1P59990 96 aa7.08□□□□□ -1.28
PRDM16-203ENST00000378391 DNAH8Q96JB1 4490 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms