RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 PKHD1P08F94 4074 aa9.06□□□□□ -0.96
UBA1-202ENST00000377269 IGLV7-46A0A075B6I9 117 aa9.05□□□□□ -0.96
UBA1-202ENST00000377269 A0A087WSZ3 146 aa9.05□□□□□ -0.96
UBA1-202ENST00000377269 RPL37AP61513 92 aaKnown RBP9.05□□□□□ -0.96
UBA1-202ENST00000377269 PANO1I0J062 215 aa9.03□□□□□ -0.96
UBA1-202ENST00000377269 IGLV5-52A0A0A0MRZ9 124 aa9.02□□□□□ -0.97
UBA1-202ENST00000377269 C7orf65Q6ZTY9 151 aa9.02□□□□□ -0.97
UBA1-202ENST00000377269 PLAC8Q9NZF1 115 aa9.02□□□□□ -0.97
UBA1-202ENST00000377269 LINC01558Q9Y6Z2 57 aa9.01□□□□□ -0.97
UBA1-202ENST00000377269 A8MWP4 228 aa8.99□□□□□ -0.97
UBA1-202ENST00000377269 REG3GQ6UW15 175 aa8.99□□□□□ -0.97
UBA1-202ENST00000377269 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.99□□□□□ -0.97
UBA1-202ENST00000377269 MOBPQ13875 183 aa8.98□□□□□ -0.97
UBA1-202ENST00000377269 DNAH8Q96JB1 4490 aa8.95□□□□□ -0.98
UBA1-202ENST00000377269 LINC00472Q9H8W2 130 aa8.95□□□□□ -0.98
UBA1-202ENST00000377269 LRP1BQ9NZR2 4599 aa8.94□□□□□ -0.98
UBA1-202ENST00000377269 SPACA4Q8TDM5 124 aa8.93□□□□□ -0.98
UBA1-202ENST00000377269 KRTAP10-1P60331 282 aa8.92□□□□□ -0.98
UBA1-202ENST00000377269 SPAG11AQ6PDA7 123 aa8.92□□□□□ -0.98
UBA1-202ENST00000377269 DYNC1H1Q14204 4646 aaKnown RBP8.91□□□□□ -0.98
UBA1-202ENST00000377269 MMP24-AS1A0A0U1RRL7 71 aa8.91□□□□□ -0.98
UBA1-202ENST00000377269 A0A1B0GVY2 172 aa8.9□□□□□ -0.99
UBA1-202ENST00000377269 SPINK7P58062 85 aa8.89□□□□□ -0.99
UBA1-202ENST00000377269 J3QL48 77 aa8.89□□□□□ -0.99
UBA1-202ENST00000377269 KRTAP11-1Q8IUC1 163 aa8.89□□□□□ -0.99
UBA1-202ENST00000377269 PRLHP81277 87 aa8.88□□□□□ -0.99
UBA1-202ENST00000377269 PCOTHQ58A44 107 aa8.88□□□□□ -0.99
UBA1-202ENST00000377269 ASB16-AS1Q495Z4 193 aa8.86□□□□□ -0.99
UBA1-202ENST00000377269 TP53AIP1Q9HCN2 124 aa8.86□□□□□ -0.99
UBA1-202ENST00000377269 SPRR1BP22528 89 aa8.85□□□□□ -0.99
UBA1-202ENST00000377269 H0Y9J4 135 aa8.83□□□□□ -1
UBA1-202ENST00000377269 HRES1P13985 223 aa8.83□□□□□ -1
UBA1-202ENST00000377269 CIRBP-AS1Q8TBR5 109 aa8.83□□□□□ -1
UBA1-202ENST00000377269 C8orf87E5RJ46 101 aa8.82□□□□□ -1
UBA1-202ENST00000377269 Q6ZSA8 131 aa8.82□□□□□ -1
UBA1-202ENST00000377269 SRRM2Q9UQ35 2752 aaKnown RBP8.81□□□□□ -1
UBA1-202ENST00000377269 EPPK1P58107 5090 aaKnown RBP8.79□□□□□ -1
UBA1-202ENST00000377269 APOBP04114 4563 aaKnown RBP8.79□□□□□ -1
UBA1-202ENST00000377269 LINC00313P59037 77 aa8.77□□□□□ -1.01
UBA1-202ENST00000377269 FAT1Q14517 4588 aa8.74□□□□□ -1.01
UBA1-202ENST00000377269 Q96NJ1 140 aa8.74□□□□□ -1.01
UBA1-202ENST00000377269 VPS13BQ7Z7G8 4022 aa8.74□□□□□ -1.01
UBA1-202ENST00000377269 C8orf17Q9NRJ1 99 aa8.73□□□□□ -1.01
UBA1-202ENST00000377269 PSORS1C2Q9UIG4 136 aa8.73□□□□□ -1.01
UBA1-202ENST00000377269 PLA2G1BP04054 148 aaKnown RBP8.71□□□□□ -1.01
UBA1-202ENST00000377269 PRAC1Q96KF2 57 aa8.7□□□□□ -1.02
UBA1-202ENST00000377269 PRR26Q8N8Z3 221 aa8.68□□□□□ -1.02
UBA1-202ENST00000377269 SMR3BP02814 79 aaPredicted RBP8.68□□□□□ -1.02
UBA1-202ENST00000377269 A0A087X002 238 aa8.66□□□□□ -1.02
UBA1-202ENST00000377269 KIAA1109Q2LD37 5005 aa8.66□□□□□ -1.02
UBA1-202ENST00000377269 LINC01554Q52M75 96 aa8.65□□□□□ -1.02
UBA1-202ENST00000377269 KRTAP13-1Q8IUC0 172 aa8.65□□□□□ -1.02
UBA1-202ENST00000377269 HSPG2P98160 4391 aa8.65□□□□□ -1.03
UBA1-202ENST00000377269 A0A1B0GVX0 72 aa8.64□□□□□ -1.03
UBA1-202ENST00000377269 MRPL34Q9BQ48 92 aaKnown RBP8.64□□□□□ -1.03
UBA1-202ENST00000377269 ADM2Q7Z4H4 148 aa8.64□□□□□ -1.03
UBA1-202ENST00000377269 IGHV6-1A0A0B4J1U7 121 aa8.62□□□□□ -1.03
UBA1-202ENST00000377269 RYR1P21817 5038 aa8.61□□□□□ -1.03
UBA1-202ENST00000377269 IGLV7-43P04211 117 aa8.6□□□□□ -1.03
UBA1-202ENST00000377269 A0A0A0MQY5 61 aa8.59□□□□□ -1.03
UBA1-202ENST00000377269 ACYP2P14621 99 aa8.59□□□□□ -1.03
UBA1-202ENST00000377269 ZNF861PO60384 105 aa8.59□□□□□ -1.03
UBA1-202ENST00000377269 SPATA8Q6RVD6 105 aa8.59□□□□□ -1.03
UBA1-202ENST00000377269 KRTAP13-3Q3SY46 172 aa8.57□□□□□ -1.04
UBA1-202ENST00000377269 H3BS24 57 aa8.57□□□□□ -1.04
UBA1-202ENST00000377269 NOTCH2NLQ7Z3S9 236 aa8.55□□□□□ -1.04
UBA1-202ENST00000377269 CDK2AP2O75956 126 aa8.55□□□□□ -1.04
UBA1-202ENST00000377269 Q5W150 140 aa8.54□□□□□ -1.04
UBA1-202ENST00000377269 ANAPC11Q9NYG5 84 aa8.54□□□□□ -1.04
UBA1-202ENST00000377269 IGLV9-49A0A0B4J1Y8 123 aa8.54□□□□□ -1.04
UBA1-202ENST00000377269 KRTAP17-1Q9BYP8 105 aa8.54□□□□□ -1.04
UBA1-202ENST00000377269 DMAC1Q96GE9 116 aa8.52□□□□□ -1.05
UBA1-202ENST00000377269 A0A1B0GU69 56 aa8.52□□□□□ -1.05
UBA1-202ENST00000377269 KRTAP10-4P60372 401 aaPredicted RBP8.51□□□□□ -1.05
UBA1-202ENST00000377269 LINC00483Q53H64 154 aa8.51□□□□□ -1.05
UBA1-202ENST00000377269 MIR22HGQ0VDD5 57 aa8.47□□□□□ -1.05
UBA1-202ENST00000377269 UQCR11O14957 56 aa8.45□□□□□ -1.06
UBA1-202ENST00000377269 Q5VSD8 79 aa8.43□□□□□ -1.06
UBA1-202ENST00000377269 BIRC6Q9NR09 4857 aa8.42□□□□□ -1.06
UBA1-202ENST00000377269 FAM229AH3BQW9 127 aa8.42□□□□□ -1.06
UBA1-202ENST00000377269 ZNF706Q9Y5V0 76 aaPredicted RBP8.42□□□□□ -1.06
UBA1-202ENST00000377269 KRTAP1-4P0C5Y4 121 aa8.41□□□□□ -1.06
UBA1-202ENST00000377269 SPINK6Q6UWN8 80 aa8.4□□□□□ -1.06
UBA1-202ENST00000377269 RETNLBQ9BQ08 111 aa8.4□□□□□ -1.06
UBA1-202ENST00000377269 CSAG1Q6PB30 78 aa8.4□□□□□ -1.07
UBA1-202ENST00000377269 LRP1Q07954 4544 aaKnown RBP8.39□□□□□ -1.07
UBA1-202ENST00000377269 FLG2Q5D862 2391 aaPredicted RBP8.37□□□□□ -1.07
UBA1-202ENST00000377269 MYCBP2O75592 4640 aa8.36□□□□□ -1.07
UBA1-202ENST00000377269 Q8N1X5 172 aa8.36□□□□□ -1.07
UBA1-202ENST00000377269 KRTAP13-2Q52LG2 175 aa8.35□□□□□ -1.07
UBA1-202ENST00000377269 PKHD1L1Q86WI1 4243 aa8.33□□□□□ -1.08
UBA1-202ENST00000377269 KRTAP4-5Q9BYR2 181 aa8.32□□□□□ -1.08
UBA1-202ENST00000377269 IGKV2-30P06310 120 aa8.32□□□□□ -1.08
UBA1-202ENST00000377269 HERC2O95714 4834 aa8.3□□□□□ -1.08
UBA1-202ENST00000377269 ABCA13Q86UQ4 5058 aa8.28□□□□□ -1.08
UBA1-202ENST00000377269 FAT3Q8TDW7 4589 aa8.26□□□□□ -1.09
UBA1-202ENST00000377269 TYMSOSQ8TAI1 123 aa8.24□□□□□ -1.09
UBA1-202ENST00000377269 TNXBP22105 4242 aa8.23□□□□□ -1.09
UBA1-202ENST00000377269 SSBP3-AS1Q7Z2R9 100 aa8.23□□□□□ -1.09
UBA1-202ENST00000377269 IGKV2D-30A0A075B6S6 120 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms