RNA–Protein interactions for RNA: ENST00000376957.6

SRM-201, Transcript of spermidine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRM, Length 1,266 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-201ENST00000376957 NDUFB1O75438 58 aa11.56□□□□□ -0.56
SRM-201ENST00000376957 A0A1B0GVX0 72 aa11.54□□□□□ -0.56
SRM-201ENST00000376957 C14orf132Q9NPU4 83 aa11.53□□□□□ -0.56
SRM-201ENST00000376957 A0A1W2PPM0 123 aa11.52□□□□□ -0.57
SRM-201ENST00000376957 MT1HP80294 61 aa11.51□□□□□ -0.57
SRM-201ENST00000376957 H3BT86 120 aa11.5□□□□□ -0.57
SRM-201ENST00000376957 M0R2T5 61 aa11.5□□□□□ -0.57
SRM-201ENST00000376957 TAX1BP3O14907 124 aa11.49□□□□□ -0.57
SRM-201ENST00000376957 KRTAP16-1A8MUX0 517 aa11.48□□□□□ -0.57
SRM-201ENST00000376957 NOTCH2NLQ7Z3S9 236 aa11.46□□□□□ -0.57
SRM-201ENST00000376957 NREPQ16612 68 aa11.45□□□□□ -0.58
SRM-201ENST00000376957 A8MWP4 228 aa11.41□□□□□ -0.58
SRM-201ENST00000376957 SPCS1Q9Y6A9 102 aa11.39□□□□□ -0.59
SRM-201ENST00000376957 COL5A1-AS1Q5SY13 56 aa11.38□□□□□ -0.59
SRM-201ENST00000376957 MTURNQ8N3F0 131 aa11.36□□□□□ -0.59
SRM-201ENST00000376957 C8orf17Q9NRJ1 99 aa11.33□□□□□ -0.6
SRM-201ENST00000376957 RBM12B-AS1Q9P1G2 102 aa11.33□□□□□ -0.6
SRM-201ENST00000376957 IGKV3D-7A0A0C4DH55 119 aa11.31□□□□□ -0.6
SRM-201ENST00000376957 KRTAP9-6A0A140TA67 174 aa11.31□□□□□ -0.6
SRM-201ENST00000376957 FAM236DA0A1B0GTK5 79 aa11.3□□□□□ -0.6
SRM-201ENST00000376957 FAM236CP0DP71 79 aa11.3□□□□□ -0.6
SRM-201ENST00000376957 PRR15Q8IV56 129 aa11.3□□□□□ -0.6
SRM-201ENST00000376957 ZCCHC13Q8WW36 166 aaKnown RBP11.3□□□□□ -0.6
SRM-201ENST00000376957 Q8N9P0 234 aaPredicted RBP11.29□□□□□ -0.6
SRM-201ENST00000376957 KRTAP10-6P60371 365 aaPredicted RBP11.28□□□□□ -0.6
SRM-201ENST00000376957 LCE2DQ5TA82 110 aaPredicted RBP11.28□□□□□ -0.6
SRM-201ENST00000376957 Q6ZVQ6 151 aa11.27□□□□□ -0.61
SRM-201ENST00000376957 LORP23490 312 aaPredicted RBP11.25□□□□□ -0.61
SRM-201ENST00000376957 BPY2O14599 106 aa11.24□□□□□ -0.61
SRM-201ENST00000376957 K7EP34 96 aa11.19□□□□□ -0.62
SRM-201ENST00000376957 GTF2H5Q6ZYL4 71 aa11.19□□□□□ -0.62
SRM-201ENST00000376957 TMEM254Q8TBM7 123 aa11.19□□□□□ -0.62
SRM-201ENST00000376957 MRPL34Q9BQ48 92 aaKnown RBP11.18□□□□□ -0.62
SRM-201ENST00000376957 hDV103S1A0JD37 113 aa11.17□□□□□ -0.62
SRM-201ENST00000376957 HRES1P13985 223 aa11.17□□□□□ -0.62
SRM-201ENST00000376957 SPINK7P58062 85 aa11.17□□□□□ -0.62
SRM-201ENST00000376957 K7EQZ3 153 aa11.16□□□□□ -0.62
SRM-201ENST00000376957 MMP24-AS1A0A0U1RRL7 71 aa11.15□□□□□ -0.62
SRM-201ENST00000376957 SMCPP49901 116 aaPredicted RBP11.15□□□□□ -0.62
SRM-201ENST00000376957 NDUFS5O43920 106 aa11.14□□□□□ -0.63
SRM-201ENST00000376957 UBL5Q9BZL1 73 aa11.14□□□□□ -0.63
SRM-201ENST00000376957 PCP4L1A6NKN8 68 aa11.13□□□□□ -0.63
SRM-201ENST00000376957 MPLKIPQ8TAP9 179 aa11.13□□□□□ -0.63
SRM-201ENST00000376957 PRO0461Q9UI25 63 aa11.1□□□□□ -0.63
SRM-201ENST00000376957 FLGP20930 4061 aaPredicted RBP11.08□□□□□ -0.64
SRM-201ENST00000376957 F8W1H4 67 aa11.07□□□□□ -0.64
SRM-201ENST00000376957 CASC2Q6XLA1 102 aa11.04□□□□□ -0.64
SRM-201ENST00000376957 LINC00846Q9NV44 126 aa11.02□□□□□ -0.65
SRM-201ENST00000376957 WFDC13Q8IUB5 93 aa11.01□□□□□ -0.65
SRM-201ENST00000376957 FSIP2Q5CZC0 6907 aa10.99□□□□□ -0.65
SRM-201ENST00000376957 Q8N9L7 120 aa10.99□□□□□ -0.65
SRM-201ENST00000376957 HCG22E2RYF7 251 aa10.93□□□□□ -0.66
SRM-201ENST00000376957 ETDBQ3ZM63 59 aa10.93□□□□□ -0.66
SRM-201ENST00000376957 CRCT1Q9UGL9 99 aa10.93□□□□□ -0.66
SRM-201ENST00000376957 CXCL6P80162 114 aa10.91□□□□□ -0.66
SRM-201ENST00000376957 C7orf65Q6ZTY9 151 aa10.9□□□□□ -0.66
SRM-201ENST00000376957 IGKV2D-30A0A075B6S6 120 aa10.89□□□□□ -0.67
SRM-201ENST00000376957 IGKV2-30P06310 120 aa10.89□□□□□ -0.67
SRM-201ENST00000376957 KRTAP9-8Q9BYQ0 159 aa10.88□□□□□ -0.67
SRM-201ENST00000376957 Q5W150 140 aa10.83□□□□□ -0.68
SRM-201ENST00000376957 ACYP1P07311 99 aa10.8□□□□□ -0.68
SRM-201ENST00000376957 H1FX-AS1Q4G0G2 97 aa10.79□□□□□ -0.68
SRM-201ENST00000376957 TP53AIP1Q9HCN2 124 aa10.79□□□□□ -0.68
SRM-201ENST00000376957 MT2AP02795 61 aa10.75□□□□□ -0.69
SRM-201ENST00000376957 KRTAP10-10P60014 251 aa10.75□□□□□ -0.69
SRM-201ENST00000376957 FAM240AA0A1B0GVK7 77 aa10.69□□□□□ -0.7
SRM-201ENST00000376957 ATP5EP2Q5VTU8 51 aa10.67□□□□□ -0.7
SRM-201ENST00000376957 C4orf26Q17RF5 130 aa10.66□□□□□ -0.7
SRM-201ENST00000376957 MT1FP04733 61 aa10.65□□□□□ -0.7
SRM-201ENST00000376957 HIST1H4AP62805 103 aaKnown RBP10.58□□□□□ -0.72
SRM-201ENST00000376957 KRTAP9-3Q9BYQ3 159 aa10.54□□□□□ -0.72
SRM-201ENST00000376957 C1orf64Q8NEQ6 169 aa10.52□□□□□ -0.73
SRM-201ENST00000376957 TRAV22A0A0B4J277 110 aa10.51□□□□□ -0.73
SRM-201ENST00000376957 LINC00643Q86TS7 51 aa10.49□□□□□ -0.73
SRM-201ENST00000376957 LOC101927531A0A1B0GV80 90 aa10.46□□□□□ -0.73
SRM-201ENST00000376957 A0A1B0GV90 55 aa10.46□□□□□ -0.73
SRM-201ENST00000376957 S4R3F8 94 aa10.45□□□□□ -0.74
SRM-201ENST00000376957 UQCRQO14949 82 aa10.44□□□□□ -0.74
SRM-201ENST00000376957 CYP4F30PQ9H0H9 118 aa10.44□□□□□ -0.74
SRM-201ENST00000376957 LCE2BO14633 110 aa10.43□□□□□ -0.74
SRM-201ENST00000376957 J3QR89 54 aa10.42□□□□□ -0.74
SRM-201ENST00000376957 ATOX1O00244 68 aa10.42□□□□□ -0.74
SRM-201ENST00000376957 C5orf47Q569G3 176 aa10.4□□□□□ -0.74
SRM-201ENST00000376957 CSAG1Q6PB30 78 aa10.39□□□□□ -0.75
SRM-201ENST00000376957 KRTAP3-1Q9BYR8 98 aa10.38□□□□□ -0.75
SRM-201ENST00000376957 USH2AO75445 5202 aa10.37□□□□□ -0.75
SRM-201ENST00000376957 H0Y9P7 68 aa10.35□□□□□ -0.75
SRM-201ENST00000376957 A0A087WVE0 104 aa10.32□□□□□ -0.76
SRM-201ENST00000376957 FAM236AA0A1B0GUQ0 79 aa10.32□□□□□ -0.76
SRM-201ENST00000376957 FAM236BA0A1B0GV22 79 aa10.32□□□□□ -0.76
SRM-201ENST00000376957 LCA10Q71F78 164 aa10.32□□□□□ -0.76
SRM-201ENST00000376957 MP68P56378 58 aa10.25□□□□□ -0.77
SRM-201ENST00000376957 KRTAP19-1Q8IUB9 90 aa10.25□□□□□ -0.77
SRM-201ENST00000376957 SSPOA2VEC9 5147 aa10.24□□□□□ -0.77
SRM-201ENST00000376957 LINC00208Q96KT6 92 aa10.2□□□□□ -0.78
SRM-201ENST00000376957 A8MUN3 132 aa10.16□□□□□ -0.78
SRM-201ENST00000376957 SCGB1A1P11684 91 aa10.16□□□□□ -0.78
SRM-201ENST00000376957 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.15□□□□□ -0.78
SRM-201ENST00000376957 OCR1Q9BZK8 76 aa10.15□□□□□ -0.78
SRM-201ENST00000376957 KRTAP9-7A8MTY7 169 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms