RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 HSPG2P98160 4391 aa9.73□□□□□ -0.85
HLA-A-202ENST00000376806 FAT1Q14517 4588 aa9.73□□□□□ -0.85
HLA-A-202ENST00000376806 Q5XG85 94 aa9.72□□□□□ -0.85
HLA-A-202ENST00000376806 KRTAP10-4P60372 401 aaPredicted RBP9.72□□□□□ -0.85
HLA-A-202ENST00000376806 C5orf47Q569G3 176 aa9.72□□□□□ -0.85
HLA-A-202ENST00000376806 RYR1P21817 5038 aa9.71□□□□□ -0.85
HLA-A-202ENST00000376806 TYMSOSQ8TAI1 123 aa9.71□□□□□ -0.85
HLA-A-202ENST00000376806 KRTAP17-1Q9BYP8 105 aa9.69□□□□□ -0.86
HLA-A-202ENST00000376806 BIRC6Q9NR09 4857 aa9.68□□□□□ -0.86
HLA-A-202ENST00000376806 LIMD2Q9BT23 127 aa9.68□□□□□ -0.86
HLA-A-202ENST00000376806 FAM236DA0A1B0GTK5 79 aa9.68□□□□□ -0.86
HLA-A-202ENST00000376806 FAM236CP0DP71 79 aa9.68□□□□□ -0.86
HLA-A-202ENST00000376806 ZCCHC13Q8WW36 166 aaKnown RBP9.67□□□□□ -0.86
HLA-A-202ENST00000376806 NOTCH2NLQ7Z3S9 236 aa9.66□□□□□ -0.86
HLA-A-202ENST00000376806 C1orf195Q5TG92 126 aa9.66□□□□□ -0.86
HLA-A-202ENST00000376806 PRR26Q8N8Z3 221 aa9.66□□□□□ -0.86
HLA-A-202ENST00000376806 MP68P56378 58 aa9.65□□□□□ -0.86
HLA-A-202ENST00000376806 C4orf48Q5BLP8 95 aa9.65□□□□□ -0.86
HLA-A-202ENST00000376806 H0Y9P7 68 aa9.64□□□□□ -0.87
HLA-A-202ENST00000376806 MRPL34Q9BQ48 92 aaKnown RBP9.64□□□□□ -0.87
HLA-A-202ENST00000376806 C8orf87E5RJ46 101 aa9.62□□□□□ -0.87
HLA-A-202ENST00000376806 SPINK1P00995 79 aa9.62□□□□□ -0.87
HLA-A-202ENST00000376806 TP53AIP1Q9HCN2 124 aa9.61□□□□□ -0.87
HLA-A-202ENST00000376806 TRAV22A0A0B4J277 110 aa9.6□□□□□ -0.87
HLA-A-202ENST00000376806 LINC00304Q8N9R0 145 aa9.6□□□□□ -0.87
HLA-A-202ENST00000376806 PKHD1L1Q86WI1 4243 aa9.59□□□□□ -0.87
HLA-A-202ENST00000376806 H3BPC8 53 aa9.59□□□□□ -0.87
HLA-A-202ENST00000376806 ATP5EP56381 51 aaPredicted RBP9.59□□□□□ -0.87
HLA-A-202ENST00000376806 LINC00208Q96KT6 92 aa9.59□□□□□ -0.87
HLA-A-202ENST00000376806 NDUFS5O43920 106 aa9.58□□□□□ -0.88
HLA-A-202ENST00000376806 RPS29P62273 56 aaKnown RBP9.56□□□□□ -0.88
HLA-A-202ENST00000376806 RPS28P62857 69 aaKnown RBP9.56□□□□□ -0.88
HLA-A-202ENST00000376806 SPAG11AQ6PDA7 123 aa9.55□□□□□ -0.88
HLA-A-202ENST00000376806 LINC00313P59037 77 aa9.53□□□□□ -0.88
HLA-A-202ENST00000376806 Q5VSD8 79 aa9.53□□□□□ -0.88
HLA-A-202ENST00000376806 FAM229AH3BQW9 127 aa9.53□□□□□ -0.88
HLA-A-202ENST00000376806 Q8N1X5 172 aa9.52□□□□□ -0.89
HLA-A-202ENST00000376806 C1orf64Q8NEQ6 169 aa9.52□□□□□ -0.89
HLA-A-202ENST00000376806 OXTP01178 125 aa9.51□□□□□ -0.89
HLA-A-202ENST00000376806 SERP1Q9Y6X1 66 aa9.51□□□□□ -0.89
HLA-A-202ENST00000376806 HERC2O95714 4834 aa9.5□□□□□ -0.89
HLA-A-202ENST00000376806 KRTAP4-5Q9BYR2 181 aa9.49□□□□□ -0.89
HLA-A-202ENST00000376806 KRTAP16-1A8MUX0 517 aa9.47□□□□□ -0.89
HLA-A-202ENST00000376806 Q8N9P0 234 aaPredicted RBP9.45□□□□□ -0.9
HLA-A-202ENST00000376806 KRTAP13-3Q3SY46 172 aa9.43□□□□□ -0.9
HLA-A-202ENST00000376806 Q5W150 140 aa9.42□□□□□ -0.9
HLA-A-202ENST00000376806 SPANXA2-OT1Q8N9U9 137 aa9.39□□□□□ -0.91
HLA-A-202ENST00000376806 CYP4F30PQ9H0H9 118 aa9.39□□□□□ -0.91
HLA-A-202ENST00000376806 PRR4Q16378 134 aa9.38□□□□□ -0.91
HLA-A-202ENST00000376806 FLG2Q5D862 2391 aaPredicted RBP9.37□□□□□ -0.91
HLA-A-202ENST00000376806 PCOTHQ58A44 107 aa9.37□□□□□ -0.91
HLA-A-202ENST00000376806 LOC101927531A0A1B0GV80 90 aa9.36□□□□□ -0.91
HLA-A-202ENST00000376806 ABCA13Q86UQ4 5058 aa9.36□□□□□ -0.91
HLA-A-202ENST00000376806 LRP1Q07954 4544 aaKnown RBP9.35□□□□□ -0.91
HLA-A-202ENST00000376806 MYCBP2O75592 4640 aa9.34□□□□□ -0.91
HLA-A-202ENST00000376806 KRTAP10-8P60410 259 aa9.32□□□□□ -0.92
HLA-A-202ENST00000376806 RETNLBQ9BQ08 111 aa9.32□□□□□ -0.92
HLA-A-202ENST00000376806 IGLV7-46A0A075B6I9 117 aa9.3□□□□□ -0.92
HLA-A-202ENST00000376806 TNXBP22105 4242 aa9.29□□□□□ -0.92
HLA-A-202ENST00000376806 SMIM26A0A096LP01 95 aa9.28□□□□□ -0.92
HLA-A-202ENST00000376806 FAT3Q8TDW7 4589 aa9.26□□□□□ -0.93
HLA-A-202ENST00000376806 C9orf92A6NGG3 77 aa9.25□□□□□ -0.93
HLA-A-202ENST00000376806 IGKV2-30P06310 120 aa9.25□□□□□ -0.93
HLA-A-202ENST00000376806 FP248Q71RG6 208 aaPredicted RBP9.23□□□□□ -0.93
HLA-A-202ENST00000376806 PCLOQ9Y6V0 5065 aa9.2□□□□□ -0.94
HLA-A-202ENST00000376806 A8MUU9 505 aa9.19□□□□□ -0.94
HLA-A-202ENST00000376806 C20orf166-AS1Q96NR2 134 aa9.19□□□□□ -0.94
HLA-A-202ENST00000376806 IGKV2D-30A0A075B6S6 120 aa9.16□□□□□ -0.94
HLA-A-202ENST00000376806 HRES1P13985 223 aa9.16□□□□□ -0.94
HLA-A-202ENST00000376806 MT1HL1P0DM35 61 aa9.15□□□□□ -0.95
HLA-A-202ENST00000376806 COA5Q86WW8 74 aa9.15□□□□□ -0.95
HLA-A-202ENST00000376806 C4orf26Q17RF5 130 aa9.13□□□□□ -0.95
HLA-A-202ENST00000376806 MPLKIPQ8TAP9 179 aa9.11□□□□□ -0.95
HLA-A-202ENST00000376806 C7orf65Q6ZTY9 151 aa9.09□□□□□ -0.95
HLA-A-202ENST00000376806 DMBT1Q9UGM3 2413 aaPredicted RBP9.07□□□□□ -0.96
HLA-A-202ENST00000376806 DMAC1Q96GE9 116 aa9.07□□□□□ -0.96
HLA-A-202ENST00000376806 Q75L30 129 aa9.06□□□□□ -0.96
HLA-A-202ENST00000376806 Q1T7F1 81 aa9.04□□□□□ -0.96
HLA-A-202ENST00000376806 ACYP2P14621 99 aa9.02□□□□□ -0.96
HLA-A-202ENST00000376806 J3QL48 77 aa9.01□□□□□ -0.97
HLA-A-202ENST00000376806 V9GYY9 64 aa8.98□□□□□ -0.97
HLA-A-202ENST00000376806 XP32Q5T750 250 aa8.95□□□□□ -0.98
HLA-A-202ENST00000376806 RPL37P61927 97 aaKnown RBP8.94□□□□□ -0.98
HLA-A-202ENST00000376806 HERC1Q15751 4861 aa8.93□□□□□ -0.98
HLA-A-202ENST00000376806 SPINK7P58062 85 aa8.92□□□□□ -0.98
HLA-A-202ENST00000376806 CHKB-CPT1BH3BT56 60 aa8.91□□□□□ -0.98
HLA-A-202ENST00000376806 ATP11AUNQ6ZP68 121 aa8.9□□□□□ -0.98
HLA-A-202ENST00000376806 PSPHP1O15172 72 aa8.89□□□□□ -0.99
HLA-A-202ENST00000376806 A8MUN3 132 aa8.87□□□□□ -0.99
HLA-A-202ENST00000376806 LINC01558Q9Y6Z2 57 aa8.85□□□□□ -0.99
HLA-A-202ENST00000376806 PRR15LQ9BU68 103 aa8.84□□□□□ -0.99
HLA-A-202ENST00000376806 TPRXLQ17RH7 258 aa8.83□□□□□ -1
HLA-A-202ENST00000376806 Q5VV11 94 aa8.81□□□□□ -1
HLA-A-202ENST00000376806 KRTAP3-1Q9BYR8 98 aa8.77□□□□□ -1.01
HLA-A-202ENST00000376806 COX6B2Q6YFQ2 88 aa8.74□□□□□ -1.01
HLA-A-202ENST00000376806 BRK1Q8WUW1 75 aa8.72□□□□□ -1.01
HLA-A-202ENST00000376806 LPAP08519 4548 aa8.7□□□□□ -1.02
HLA-A-202ENST00000376806 HMCN2Q8NDA2 5059 aa8.69□□□□□ -1.02
HLA-A-202ENST00000376806 SPTSSBQ8NFR3 76 aa8.64□□□□□ -1.03
HLA-A-202ENST00000376806 PRO0628Q9UI54 55 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms