RNA–Protein interactions for RNA: ENST00000376618.6

CPT1A-202, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-202ENST00000376618 PKIGQ9Y2B9 76 aa8.3□□□□□ -1.08
CPT1A-202ENST00000376618 NDUFS5O43920 106 aa8.29□□□□□ -1.08
CPT1A-202ENST00000376618 FAT1Q14517 4588 aa8.28□□□□□ -1.08
CPT1A-202ENST00000376618 MP68P56378 58 aa8.27□□□□□ -1.09
CPT1A-202ENST00000376618 PCOTHQ58A44 107 aa8.27□□□□□ -1.09
CPT1A-202ENST00000376618 NDUFB1O75438 58 aa8.26□□□□□ -1.09
CPT1A-202ENST00000376618 SMIM26A0A096LP01 95 aa8.25□□□□□ -1.09
CPT1A-202ENST00000376618 TRAV22A0A0B4J277 110 aa8.25□□□□□ -1.09
CPT1A-202ENST00000376618 SEC61GP60059 68 aa8.25□□□□□ -1.09
CPT1A-202ENST00000376618 LINC00336Q6ZUF6 198 aa8.25□□□□□ -1.09
CPT1A-202ENST00000376618 C8orf17Q9NRJ1 99 aa8.24□□□□□ -1.09
CPT1A-202ENST00000376618 ZNF706Q9Y5V0 76 aaPredicted RBP8.23□□□□□ -1.09
CPT1A-202ENST00000376618 KMT2CQ8NEZ4 4911 aaKnown RBP8.21□□□□□ -1.1
CPT1A-202ENST00000376618 RETNLBQ9BQ08 111 aa8.2□□□□□ -1.1
CPT1A-202ENST00000376618 A0A1B0GVX0 72 aa8.2□□□□□ -1.1
CPT1A-202ENST00000376618 ATP5EP56381 51 aaPredicted RBP8.2□□□□□ -1.1
CPT1A-202ENST00000376618 CDK2AP2O75956 126 aa8.18□□□□□ -1.1
CPT1A-202ENST00000376618 KRTAP13-2Q52LG2 175 aa8.18□□□□□ -1.1
CPT1A-202ENST00000376618 DYNC1H1Q14204 4646 aaKnown RBP8.17□□□□□ -1.1
CPT1A-202ENST00000376618 PSPHP1O15172 72 aa8.16□□□□□ -1.1
CPT1A-202ENST00000376618 Q5W150 140 aa8.16□□□□□ -1.1
CPT1A-202ENST00000376618 CD164Q04900 197 aa8.14□□□□□ -1.11
CPT1A-202ENST00000376618 SMR3BP02814 79 aaPredicted RBP8.13□□□□□ -1.11
CPT1A-202ENST00000376618 ASB16-AS1Q495Z4 193 aa8.13□□□□□ -1.11
CPT1A-202ENST00000376618 MRPL34Q9BQ48 92 aaKnown RBP8.12□□□□□ -1.11
CPT1A-202ENST00000376618 BRK1Q8WUW1 75 aa8.11□□□□□ -1.11
CPT1A-202ENST00000376618 Q6ZSA8 131 aa8.1□□□□□ -1.11
CPT1A-202ENST00000376618 CYP4F30PQ9H0H9 118 aa8.08□□□□□ -1.12
CPT1A-202ENST00000376618 KRTAP1-4P0C5Y4 121 aa8.07□□□□□ -1.12
CPT1A-202ENST00000376618 PLA2G1BP04054 148 aaKnown RBP8.06□□□□□ -1.12
CPT1A-202ENST00000376618 A8MU10 97 aa8.06□□□□□ -1.12
CPT1A-202ENST00000376618 A8MUN3 132 aa8.05□□□□□ -1.12
CPT1A-202ENST00000376618 C1orf195Q5TG92 126 aa8.04□□□□□ -1.12
CPT1A-202ENST00000376618 Q8N9P0 234 aaPredicted RBP8.03□□□□□ -1.12
CPT1A-202ENST00000376618 SSBP3-AS1Q7Z2R9 100 aa8.03□□□□□ -1.12
CPT1A-202ENST00000376618 APOBP04114 4563 aaKnown RBP8.03□□□□□ -1.12
CPT1A-202ENST00000376618 TP53AIP1Q9HCN2 124 aa8.02□□□□□ -1.13
CPT1A-202ENST00000376618 COA5Q86WW8 74 aa8.01□□□□□ -1.13
CPT1A-202ENST00000376618 H3BPC8 53 aa8□□□□□ -1.13
CPT1A-202ENST00000376618 IGLV7-46A0A075B6I9 117 aa8□□□□□ -1.13
CPT1A-202ENST00000376618 PRR26Q8N8Z3 221 aa7.99□□□□□ -1.13
CPT1A-202ENST00000376618 LRP1Q07954 4544 aaKnown RBP7.99□□□□□ -1.13
CPT1A-202ENST00000376618 LINC00313P59037 77 aa7.99□□□□□ -1.13
CPT1A-202ENST00000376618 SPANXA2-OT1Q8N9U9 137 aa7.99□□□□□ -1.13
CPT1A-202ENST00000376618 RYR2Q92736 4967 aa7.98□□□□□ -1.13
CPT1A-202ENST00000376618 Q1T7F1 81 aa7.98□□□□□ -1.13
CPT1A-202ENST00000376618 KRTAP21-3Q3LHN1 58 aa7.97□□□□□ -1.13
CPT1A-202ENST00000376618 SPAG11AQ6PDA7 123 aa7.96□□□□□ -1.14
CPT1A-202ENST00000376618 KRTAP13-3Q3SY46 172 aa7.96□□□□□ -1.14
CPT1A-202ENST00000376618 TYMSOSQ8TAI1 123 aa7.95□□□□□ -1.14
CPT1A-202ENST00000376618 HRES1P13985 223 aa7.95□□□□□ -1.14
CPT1A-202ENST00000376618 PRO0628Q9UI54 55 aa7.94□□□□□ -1.14
CPT1A-202ENST00000376618 PRR15LQ9BU68 103 aa7.92□□□□□ -1.14
CPT1A-202ENST00000376618 RYR3Q15413 4870 aa7.91□□□□□ -1.14
CPT1A-202ENST00000376618 Q5VV11 94 aa7.91□□□□□ -1.14
CPT1A-202ENST00000376618 MYCBP2O75592 4640 aa7.9□□□□□ -1.14
CPT1A-202ENST00000376618 PKHD1L1Q86WI1 4243 aa7.88□□□□□ -1.15
CPT1A-202ENST00000376618 KRTAP16-1A8MUX0 517 aa7.88□□□□□ -1.15
CPT1A-202ENST00000376618 IGKV2D-30A0A075B6S6 120 aa7.88□□□□□ -1.15
CPT1A-202ENST00000376618 IGKV2-30P06310 120 aa7.88□□□□□ -1.15
CPT1A-202ENST00000376618 FLG2Q5D862 2391 aaPredicted RBP7.88□□□□□ -1.15
CPT1A-202ENST00000376618 CHKB-CPT1BH3BT56 60 aa7.86□□□□□ -1.15
CPT1A-202ENST00000376618 LOC101927531A0A1B0GV80 90 aa7.85□□□□□ -1.15
CPT1A-202ENST00000376618 C9orf92A6NGG3 77 aa7.85□□□□□ -1.15
CPT1A-202ENST00000376618 LCE2CQ5TA81 110 aa7.85□□□□□ -1.15
CPT1A-202ENST00000376618 C8orf87E5RJ46 101 aa7.84□□□□□ -1.15
CPT1A-202ENST00000376618 DMBT1Q9UGM3 2413 aaPredicted RBP7.82□□□□□ -1.16
CPT1A-202ENST00000376618 LCE2BO14633 110 aa7.81□□□□□ -1.16
CPT1A-202ENST00000376618 LINC00304Q8N9R0 145 aa7.81□□□□□ -1.16
CPT1A-202ENST00000376618 LIMD2Q9BT23 127 aa7.8□□□□□ -1.16
CPT1A-202ENST00000376618 A0A1B0GVY2 172 aa7.79□□□□□ -1.16
CPT1A-202ENST00000376618 SPINK1P00995 79 aa7.78□□□□□ -1.16
CPT1A-202ENST00000376618 KRTAP10-4P60372 401 aaPredicted RBP7.76□□□□□ -1.17
CPT1A-202ENST00000376618 LCE2AQ5TA79 106 aaPredicted RBP7.76□□□□□ -1.17
CPT1A-202ENST00000376618 HSPG2P98160 4391 aa7.75□□□□□ -1.17
CPT1A-202ENST00000376618 LCA10Q71F78 164 aa7.75□□□□□ -1.17
CPT1A-202ENST00000376618 A6NED7 52 aa7.75□□□□□ -1.17
CPT1A-202ENST00000376618 SPINK7P58062 85 aa7.74□□□□□ -1.17
CPT1A-202ENST00000376618 V9GYY9 64 aa7.74□□□□□ -1.17
CPT1A-202ENST00000376618 KIAA1109Q2LD37 5005 aa7.74□□□□□ -1.17
CPT1A-202ENST00000376618 Q8N1X5 172 aa7.74□□□□□ -1.17
CPT1A-202ENST00000376618 SPTSSBQ8NFR3 76 aa7.73□□□□□ -1.17
CPT1A-202ENST00000376618 ACYP2P14621 99 aa7.71□□□□□ -1.18
CPT1A-202ENST00000376618 TNXBP22105 4242 aa7.71□□□□□ -1.18
CPT1A-202ENST00000376618 FAT3Q8TDW7 4589 aa7.7□□□□□ -1.18
CPT1A-202ENST00000376618 DMAC1Q96GE9 116 aa7.69□□□□□ -1.18
CPT1A-202ENST00000376618 Q75L30 129 aa7.69□□□□□ -1.18
CPT1A-202ENST00000376618 LINC01558Q9Y6Z2 57 aa7.69□□□□□ -1.18
CPT1A-202ENST00000376618 KRTAP17-1Q9BYP8 105 aa7.68□□□□□ -1.18
CPT1A-202ENST00000376618 C7orf65Q6ZTY9 151 aa7.67□□□□□ -1.18
CPT1A-202ENST00000376618 EPPK1P58107 5090 aaKnown RBP7.65□□□□□ -1.18
CPT1A-202ENST00000376618 LPAP08519 4548 aa7.64□□□□□ -1.19
CPT1A-202ENST00000376618 PMAIP1Q13794 54 aa7.61□□□□□ -1.19
CPT1A-202ENST00000376618 RYR1P21817 5038 aa7.6□□□□□ -1.19
CPT1A-202ENST00000376618 A0A1B0GU69 56 aa7.53□□□□□ -1.2
CPT1A-202ENST00000376618 Q5VSD8 79 aa7.52□□□□□ -1.21
CPT1A-202ENST00000376618 KRTAP3-1Q9BYR8 98 aa7.52□□□□□ -1.21
CPT1A-202ENST00000376618 CDC42SE1Q9NRR8 79 aa7.52□□□□□ -1.21
CPT1A-202ENST00000376618 ABCA13Q86UQ4 5058 aa7.51□□□□□ -1.21
CPT1A-202ENST00000376618 RPS29P62273 56 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms