RNA–Protein interactions for RNA: ENST00000376561.7

CTTN-203, Transcript of cortactin, humanhuman

TSL 1 (best) BASIC

Gene CTTN, Length 2,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-203ENST00000376561 CYSTM1Q9H1C7 97 aa10.14□□□□□ -0.79
CTTN-203ENST00000376561 LINC00304Q8N9R0 145 aa10.14□□□□□ -0.79
CTTN-203ENST00000376561 hDV103S1A0JD37 113 aa10.13□□□□□ -0.79
CTTN-203ENST00000376561 Q5VSD8 79 aa10.13□□□□□ -0.79
CTTN-203ENST00000376561 SPAG11AQ6PDA7 123 aa10.1□□□□□ -0.79
CTTN-203ENST00000376561 NOTCH2NLQ7Z3S9 236 aa10.1□□□□□ -0.79
CTTN-203ENST00000376561 KLKP1Q107X0 134 aa10.09□□□□□ -0.79
CTTN-203ENST00000376561 PKHD1L1Q86WI1 4243 aa10.09□□□□□ -0.79
CTTN-203ENST00000376561 TMEM254Q8TBM7 123 aa10.09□□□□□ -0.79
CTTN-203ENST00000376561 RPS29P62273 56 aaKnown RBP10.08□□□□□ -0.8
CTTN-203ENST00000376561 SNURFQ9Y675 71 aa10.08□□□□□ -0.8
CTTN-203ENST00000376561 RYR1P21817 5038 aa10.07□□□□□ -0.8
CTTN-203ENST00000376561 KRTAP17-1Q9BYP8 105 aa10.05□□□□□ -0.8
CTTN-203ENST00000376561 C5orf47Q569G3 176 aa10.03□□□□□ -0.8
CTTN-203ENST00000376561 MRPL34Q9BQ48 92 aaKnown RBP10.03□□□□□ -0.8
CTTN-203ENST00000376561 A0A0U1RQV1 116 aa10.03□□□□□ -0.8
CTTN-203ENST00000376561 C8orf87E5RJ46 101 aa10.02□□□□□ -0.81
CTTN-203ENST00000376561 EPPK1P58107 5090 aaKnown RBP10.02□□□□□ -0.81
CTTN-203ENST00000376561 KIAA1109Q2LD37 5005 aa10□□□□□ -0.81
CTTN-203ENST00000376561 H7BZZ5 65 aa9.99□□□□□ -0.81
CTTN-203ENST00000376561 LINC00313P59037 77 aa9.99□□□□□ -0.81
CTTN-203ENST00000376561 NDUFS5O43920 106 aa9.97□□□□□ -0.81
CTTN-203ENST00000376561 Q8N1X5 172 aa9.97□□□□□ -0.81
CTTN-203ENST00000376561 TP53AIP1Q9HCN2 124 aa9.97□□□□□ -0.81
CTTN-203ENST00000376561 TMEM258P61165 79 aa9.96□□□□□ -0.82
CTTN-203ENST00000376561 NDUFC1O43677 76 aa9.95□□□□□ -0.82
CTTN-203ENST00000376561 MP68P56378 58 aa9.95□□□□□ -0.82
CTTN-203ENST00000376561 H0Y9P7 68 aa9.94□□□□□ -0.82
CTTN-203ENST00000376561 KRTAP10-8P60410 259 aa9.94□□□□□ -0.82
CTTN-203ENST00000376561 LRP1Q07954 4544 aaKnown RBP9.94□□□□□ -0.82
CTTN-203ENST00000376561 ZCCHC13Q8WW36 166 aaKnown RBP9.94□□□□□ -0.82
CTTN-203ENST00000376561 TRAV22A0A0B4J277 110 aa9.93□□□□□ -0.82
CTTN-203ENST00000376561 LINC00208Q96KT6 92 aa9.91□□□□□ -0.82
CTTN-203ENST00000376561 TNXBP22105 4242 aa9.9□□□□□ -0.82
CTTN-203ENST00000376561 KRTAP16-1A8MUX0 517 aa9.89□□□□□ -0.83
CTTN-203ENST00000376561 H3BPC8 53 aa9.88□□□□□ -0.83
CTTN-203ENST00000376561 Q8N9P0 234 aaPredicted RBP9.87□□□□□ -0.83
CTTN-203ENST00000376561 FLG2Q5D862 2391 aaPredicted RBP9.87□□□□□ -0.83
CTTN-203ENST00000376561 C1orf64Q8NEQ6 169 aa9.85□□□□□ -0.83
CTTN-203ENST00000376561 FAT3Q8TDW7 4589 aa9.84□□□□□ -0.83
CTTN-203ENST00000376561 FAM236DA0A1B0GTK5 79 aa9.84□□□□□ -0.83
CTTN-203ENST00000376561 FAM236CP0DP71 79 aa9.84□□□□□ -0.83
CTTN-203ENST00000376561 RETNLBQ9BQ08 111 aa9.84□□□□□ -0.83
CTTN-203ENST00000376561 Q5W150 140 aa9.82□□□□□ -0.84
CTTN-203ENST00000376561 KRTAP13-3Q3SY46 172 aa9.79□□□□□ -0.84
CTTN-203ENST00000376561 MT1HL1P0DM35 61 aa9.77□□□□□ -0.85
CTTN-203ENST00000376561 MYCBP2O75592 4640 aa9.76□□□□□ -0.85
CTTN-203ENST00000376561 ATP5EP56381 51 aaPredicted RBP9.75□□□□□ -0.85
CTTN-203ENST00000376561 C9orf92A6NGG3 77 aa9.74□□□□□ -0.85
CTTN-203ENST00000376561 DMBT1Q9UGM3 2413 aaPredicted RBP9.73□□□□□ -0.85
CTTN-203ENST00000376561 KRTAP4-5Q9BYR2 181 aa9.72□□□□□ -0.85
CTTN-203ENST00000376561 LOC101927531A0A1B0GV80 90 aa9.7□□□□□ -0.86
CTTN-203ENST00000376561 RPS28P62857 69 aaKnown RBP9.69□□□□□ -0.86
CTTN-203ENST00000376561 PCOTHQ58A44 107 aa9.68□□□□□ -0.86
CTTN-203ENST00000376561 OXTP01178 125 aa9.67□□□□□ -0.86
CTTN-203ENST00000376561 FP248Q71RG6 208 aaPredicted RBP9.66□□□□□ -0.86
CTTN-203ENST00000376561 SPANXA2-OT1Q8N9U9 137 aa9.66□□□□□ -0.86
CTTN-203ENST00000376561 C20orf166-AS1Q96NR2 134 aa9.66□□□□□ -0.86
CTTN-203ENST00000376561 CYP4F30PQ9H0H9 118 aa9.65□□□□□ -0.86
CTTN-203ENST00000376561 SERP1Q9Y6X1 66 aa9.65□□□□□ -0.86
CTTN-203ENST00000376561 PRR4Q16378 134 aa9.64□□□□□ -0.87
CTTN-203ENST00000376561 A8MUU9 505 aa9.64□□□□□ -0.87
CTTN-203ENST00000376561 IGKV2-30P06310 120 aa9.61□□□□□ -0.87
CTTN-203ENST00000376561 IGLV7-46A0A075B6I9 117 aa9.59□□□□□ -0.87
CTTN-203ENST00000376561 BIRC6Q9NR09 4857 aa9.55□□□□□ -0.88
CTTN-203ENST00000376561 IGKV2D-30A0A075B6S6 120 aa9.55□□□□□ -0.88
CTTN-203ENST00000376561 Q75L30 129 aa9.54□□□□□ -0.88
CTTN-203ENST00000376561 HRES1P13985 223 aa9.5□□□□□ -0.89
CTTN-203ENST00000376561 C7orf65Q6ZTY9 151 aa9.48□□□□□ -0.89
CTTN-203ENST00000376561 ABCA13Q86UQ4 5058 aa9.47□□□□□ -0.89
CTTN-203ENST00000376561 HERC2O95714 4834 aa9.47□□□□□ -0.89
CTTN-203ENST00000376561 XP32Q5T750 250 aa9.46□□□□□ -0.9
CTTN-203ENST00000376561 RPL37P61927 97 aaKnown RBP9.42□□□□□ -0.9
CTTN-203ENST00000376561 SMIM26A0A096LP01 95 aa9.41□□□□□ -0.9
CTTN-203ENST00000376561 J3QL48 77 aa9.4□□□□□ -0.91
CTTN-203ENST00000376561 ATP11AUNQ6ZP68 121 aa9.4□□□□□ -0.91
CTTN-203ENST00000376561 COA5Q86WW8 74 aa9.39□□□□□ -0.91
CTTN-203ENST00000376561 TPRXLQ17RH7 258 aa9.38□□□□□ -0.91
CTTN-203ENST00000376561 DMAC1Q96GE9 116 aa9.38□□□□□ -0.91
CTTN-203ENST00000376561 SPINK7P58062 85 aa9.37□□□□□ -0.91
CTTN-203ENST00000376561 ACYP2P14621 99 aa9.33□□□□□ -0.92
CTTN-203ENST00000376561 C4orf26Q17RF5 130 aa9.3□□□□□ -0.92
CTTN-203ENST00000376561 MPLKIPQ8TAP9 179 aa9.27□□□□□ -0.93
CTTN-203ENST00000376561 LPAP08519 4548 aa9.25□□□□□ -0.93
CTTN-203ENST00000376561 LRP2P98164 4655 aa9.22□□□□□ -0.93
CTTN-203ENST00000376561 A8MUN3 132 aa9.21□□□□□ -0.93
CTTN-203ENST00000376561 Q1T7F1 81 aa9.2□□□□□ -0.94
CTTN-203ENST00000376561 CHKB-CPT1BH3BT56 60 aa9.19□□□□□ -0.94
CTTN-203ENST00000376561 KRTAP3-1Q9BYR8 98 aa9.17□□□□□ -0.94
CTTN-203ENST00000376561 COX6B2Q6YFQ2 88 aa9.15□□□□□ -0.95
CTTN-203ENST00000376561 V9GYY9 64 aa9.14□□□□□ -0.95
CTTN-203ENST00000376561 PCLOQ9Y6V0 5065 aa9.09□□□□□ -0.95
CTTN-203ENST00000376561 PSPHP1O15172 72 aa9.06□□□□□ -0.96
CTTN-203ENST00000376561 LINC01558Q9Y6Z2 57 aa9.05□□□□□ -0.96
CTTN-203ENST00000376561 SEC61BP60468 96 aaKnown RBP9.04□□□□□ -0.96
CTTN-203ENST00000376561 PRR15LQ9BU68 103 aa9.01□□□□□ -0.97
CTTN-203ENST00000376561 Q5VV11 94 aa8.97□□□□□ -0.97
CTTN-203ENST00000376561 SPTSSBQ8NFR3 76 aa8.95□□□□□ -0.98
CTTN-203ENST00000376561 HERC1Q15751 4861 aa8.94□□□□□ -0.98
CTTN-203ENST00000376561 RBM12B-AS1Q9P1G2 102 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms