RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 A0A087X002 238 aa6.35□□□□□ -1.39
MDC1-201ENST00000376406 H1FX-AS1Q4G0G2 97 aa6.35□□□□□ -1.39
MDC1-201ENST00000376406 PRAC1Q96KF2 57 aa6.35□□□□□ -1.39
MDC1-201ENST00000376406 CELSR2Q9HCU4 2923 aa6.34□□□□□ -1.39
MDC1-201ENST00000376406 PLAC4Q8WY50 150 aa6.31□□□□□ -1.4
MDC1-201ENST00000376406 KRTAP13-1Q8IUC0 172 aa6.3□□□□□ -1.4
MDC1-201ENST00000376406 NOTCH2NLQ7Z3S9 236 aa6.3□□□□□ -1.4
MDC1-201ENST00000376406 ROMO1P60602 79 aa6.3□□□□□ -1.4
MDC1-201ENST00000376406 RPL37P61927 97 aaKnown RBP6.3□□□□□ -1.4
MDC1-201ENST00000376406 TENM1Q9UKZ4 2725 aa6.29□□□□□ -1.4
MDC1-201ENST00000376406 ASH1LQ9NR48 2969 aaKnown RBP6.29□□□□□ -1.4
MDC1-201ENST00000376406 EYSQ5T1H1 3165 aa6.29□□□□□ -1.4
MDC1-201ENST00000376406 REV3LO60673 3130 aa6.28□□□□□ -1.4
MDC1-201ENST00000376406 ZANQ9Y493 2812 aa6.27□□□□□ -1.41
MDC1-201ENST00000376406 FREM2Q5SZK8 3169 aa6.26□□□□□ -1.41
MDC1-201ENST00000376406 NF1P21359 2839 aa6.26□□□□□ -1.41
MDC1-201ENST00000376406 SPEGQ15772 3267 aa6.25□□□□□ -1.41
MDC1-201ENST00000376406 DCHS2Q6V1P9 2916 aa6.24□□□□□ -1.41
MDC1-201ENST00000376406 SPATA8Q6RVD6 105 aa6.24□□□□□ -1.41
MDC1-201ENST00000376406 M0QZ58 72 aa6.22□□□□□ -1.41
MDC1-201ENST00000376406 HRNRQ86YZ3 2850 aaPredicted RBP6.21□□□□□ -1.42
MDC1-201ENST00000376406 ADM2Q7Z4H4 148 aa6.2□□□□□ -1.42
MDC1-201ENST00000376406 KRTAP13-2Q52LG2 175 aa6.19□□□□□ -1.42
MDC1-201ENST00000376406 CELSR1Q9NYQ6 3014 aa6.17□□□□□ -1.42
MDC1-201ENST00000376406 CFAP47Q6ZTR5 3102 aa6.16□□□□□ -1.42
MDC1-201ENST00000376406 A6NN06 94 aa6.15□□□□□ -1.43
MDC1-201ENST00000376406 FBN2P35556 2912 aa6.12□□□□□ -1.43
MDC1-201ENST00000376406 LOC400499M0QZD8 3231 aa6.11□□□□□ -1.43
MDC1-201ENST00000376406 MYO15AQ9UKN7 3530 aa6.11□□□□□ -1.43
MDC1-201ENST00000376406 MXRA5Q9NR99 2828 aa6.1□□□□□ -1.43
MDC1-201ENST00000376406 A8MUU9 505 aa6.08□□□□□ -1.44
MDC1-201ENST00000376406 TENM3Q9P273 2699 aa6.08□□□□□ -1.44
MDC1-201ENST00000376406 C20orf166-AS1Q96NR2 134 aa6.07□□□□□ -1.44
MDC1-201ENST00000376406 NBPF19A0A087WUL8 3843 aa6.06□□□□□ -1.44
MDC1-201ENST00000376406 KRTAP25-1Q3LHN0 102 aa6.04□□□□□ -1.44
MDC1-201ENST00000376406 TPRXLQ17RH7 258 aa6.03□□□□□ -1.44
MDC1-201ENST00000376406 A8MU10 97 aa6.02□□□□□ -1.45
MDC1-201ENST00000376406 WDFY3Q8IZQ1 3526 aa5.98□□□□□ -1.45
MDC1-201ENST00000376406 ASPMQ8IZT6 3477 aa5.94□□□□□ -1.46
MDC1-201ENST00000376406 KRTAP1-4P0C5Y4 121 aa5.93□□□□□ -1.46
MDC1-201ENST00000376406 KRTAP16-1A8MUX0 517 aa5.92□□□□□ -1.46
MDC1-201ENST00000376406 XP32Q5T750 250 aa5.89□□□□□ -1.47
MDC1-201ENST00000376406 PKD1L1Q8TDX9 2849 aa5.89□□□□□ -1.47
MDC1-201ENST00000376406 PDZD2O15018 2839 aa5.88□□□□□ -1.47
MDC1-201ENST00000376406 TNP1P09430 55 aa5.87□□□□□ -1.47
MDC1-201ENST00000376406 TENM2Q9NT68 2774 aa5.84□□□□□ -1.48
MDC1-201ENST00000376406 TGP01266 2768 aa5.83□□□□□ -1.48
MDC1-201ENST00000376406 PRO2289Q9P1D8 64 aa5.82□□□□□ -1.48
MDC1-201ENST00000376406 ZFHX4Q86UP3 3567 aa5.82□□□□□ -1.48
MDC1-201ENST00000376406 DMDP11532 3685 aa5.8□□□□□ -1.48
MDC1-201ENST00000376406 A0A1B0GVY2 172 aa5.8□□□□□ -1.48
MDC1-201ENST00000376406 ZFHX3Q15911 3703 aa5.79□□□□□ -1.48
MDC1-201ENST00000376406 DCHS1Q96JQ0 3298 aa5.79□□□□□ -1.48
MDC1-201ENST00000376406 KRTAP13-3Q3SY46 172 aa5.77□□□□□ -1.49
MDC1-201ENST00000376406 PP632Q6XCG6 107 aa5.76□□□□□ -1.49
MDC1-201ENST00000376406 VWFP04275 2813 aa5.76□□□□□ -1.49
MDC1-201ENST00000376406 H0YAA0 97 aa5.76□□□□□ -1.49
MDC1-201ENST00000376406 KRTAP10-8P60410 259 aa5.74□□□□□ -1.49
MDC1-201ENST00000376406 RELNP78509 3460 aa5.74□□□□□ -1.49
MDC1-201ENST00000376406 LAMA5O15230 3695 aa5.73□□□□□ -1.49
MDC1-201ENST00000376406 CSMD1Q96PZ7 3565 aa5.73□□□□□ -1.49
MDC1-201ENST00000376406 SMG1Q96Q15 3661 aaKnown RBP5.71□□□□□ -1.5
MDC1-201ENST00000376406 KRTAP10-10P60014 251 aa5.68□□□□□ -1.5
MDC1-201ENST00000376406 NDUFAF8A1L188 74 aa5.68□□□□□ -1.5
MDC1-201ENST00000376406 BSNQ9UPA5 3926 aa5.66□□□□□ -1.5
MDC1-201ENST00000376406 OTOGQ6ZRI0 2925 aa5.62□□□□□ -1.51
MDC1-201ENST00000376406 SPENQ96T58 3664 aaKnown RBP5.6□□□□□ -1.51
MDC1-201ENST00000376406 ANK3Q12955 4377 aaKnown RBP5.6□□□□□ -1.51
MDC1-201ENST00000376406 C10orf95Q9H7T3 257 aa5.6□□□□□ -1.51
MDC1-201ENST00000376406 COL7A1Q02388 2944 aa5.59□□□□□ -1.51
MDC1-201ENST00000376406 FBN1P35555 2871 aaKnown RBP5.57□□□□□ -1.52
MDC1-201ENST00000376406 P0C880 135 aa5.53□□□□□ -1.52
MDC1-201ENST00000376406 MUC3AQ02505 3323 aa5.51□□□□□ -1.53
MDC1-201ENST00000376406 SVEP1Q4LDE5 3571 aa5.49□□□□□ -1.53
MDC1-201ENST00000376406 TRRAPQ9Y4A5 3859 aa5.46□□□□□ -1.53
MDC1-201ENST00000376406 FBN3Q75N90 2809 aa5.41□□□□□ -1.54
MDC1-201ENST00000376406 AKAP9Q99996 3911 aa5.41□□□□□ -1.54
MDC1-201ENST00000376406 MEGF8Q7Z7M0 2845 aa5.41□□□□□ -1.54
MDC1-201ENST00000376406 KRTAP12-2P59991 146 aa5.4□□□□□ -1.54
MDC1-201ENST00000376406 SRRM2Q9UQ35 2752 aaKnown RBP5.39□□□□□ -1.55
MDC1-201ENST00000376406 VPS13CQ709C8 3753 aa5.36□□□□□ -1.55
MDC1-201ENST00000376406 KRTAP3-1Q9BYR8 98 aa5.35□□□□□ -1.55
MDC1-201ENST00000376406 HUWE1Q7Z6Z7 4374 aaKnown RBP5.33□□□□□ -1.56
MDC1-201ENST00000376406 KRTAP12-1P59990 96 aa5.31□□□□□ -1.56
MDC1-201ENST00000376406 KRTAP13-4Q3LI77 160 aa5.3□□□□□ -1.56
MDC1-201ENST00000376406 ALMS1Q8TCU4 4167 aa5.26□□□□□ -1.57
MDC1-201ENST00000376406 CSMD2Q7Z408 3487 aa5.25□□□□□ -1.57
MDC1-201ENST00000376406 KRTAP10-6P60371 365 aaPredicted RBP5.19□□□□□ -1.58
MDC1-201ENST00000376406 MT1HL1P0DM35 61 aa5.18□□□□□ -1.58
MDC1-201ENST00000376406 ZNF469Q96JG9 3925 aaPredicted RBP5.1□□□□□ -1.59
MDC1-201ENST00000376406 DNAH1Q9P2D7 4330 aa5.1□□□□□ -1.59
MDC1-201ENST00000376406 CUBNO60494 3623 aa5.07□□□□□ -1.6
MDC1-201ENST00000376406 KRTAP3-3Q9BYR6 98 aa5.05□□□□□ -1.6
MDC1-201ENST00000376406 KRTAP10-4P60372 401 aaPredicted RBP5.04□□□□□ -1.6
MDC1-201ENST00000376406 KRTAP3-2Q9BYR7 98 aa5.03□□□□□ -1.6
MDC1-201ENST00000376406 DNAH3Q8TD57 4116 aa5.01□□□□□ -1.61
MDC1-201ENST00000376406 DNAH9Q9NYC9 4486 aa5□□□□□ -1.61
MDC1-201ENST00000376406 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
MDC1-201ENST00000376406 KRTAP4-5Q9BYR2 181 aa4.91□□□□□ -1.62
MDC1-201ENST00000376406 CSMD3Q7Z407 3707 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 916.1 ms