RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 MPLKIPQ8TAP9 179 aa12.38□□□□□ -0.43
SYNC-201ENST00000373484 SPINK6Q6UWN8 80 aa12.37□□□□□ -0.43
SYNC-201ENST00000373484 C1orf64Q8NEQ6 169 aa12.37□□□□□ -0.43
SYNC-201ENST00000373484 H0Y9J4 135 aa12.36□□□□□ -0.43
SYNC-201ENST00000373484 MP68P56378 58 aa12.36□□□□□ -0.43
SYNC-201ENST00000373484 FAT3Q8TDW7 4589 aa12.36□□□□□ -0.43
SYNC-201ENST00000373484 SPRR1BP22528 89 aa12.35□□□□□ -0.43
SYNC-201ENST00000373484 BRK1Q8WUW1 75 aa12.35□□□□□ -0.43
SYNC-201ENST00000373484 LRP1Q07954 4544 aaKnown RBP12.35□□□□□ -0.43
SYNC-201ENST00000373484 KRTAP29-1A8MX34 341 aaPredicted RBP12.32□□□□□ -0.44
SYNC-201ENST00000373484 SPANXA2-OT1Q8N9U9 137 aa12.32□□□□□ -0.44
SYNC-201ENST00000373484 V9GYY9 64 aa12.31□□□□□ -0.44
SYNC-201ENST00000373484 A0A087WSZ3 146 aa12.29□□□□□ -0.44
SYNC-201ENST00000373484 TRAV22A0A0B4J277 110 aa12.28□□□□□ -0.44
SYNC-201ENST00000373484 ZNF861PO60384 105 aa12.28□□□□□ -0.44
SYNC-201ENST00000373484 UBE2AP49459 152 aa12.27□□□□□ -0.45
SYNC-201ENST00000373484 PRR15Q8IV56 129 aa12.25□□□□□ -0.45
SYNC-201ENST00000373484 KRTAP13-1Q8IUC0 172 aa12.25□□□□□ -0.45
SYNC-201ENST00000373484 PRLHP81277 87 aa12.24□□□□□ -0.45
SYNC-201ENST00000373484 A8MWP4 228 aa12.23□□□□□ -0.45
SYNC-201ENST00000373484 WFDC13Q8IUB5 93 aa12.22□□□□□ -0.45
SYNC-201ENST00000373484 CASC2Q6XLA1 102 aa12.21□□□□□ -0.45
SYNC-201ENST00000373484 LINC00472Q9H8W2 130 aa12.21□□□□□ -0.45
SYNC-201ENST00000373484 DMBT1Q9UGM3 2413 aaPredicted RBP12.2□□□□□ -0.46
SYNC-201ENST00000373484 J3QL48 77 aa12.2□□□□□ -0.46
SYNC-201ENST00000373484 C1orf195Q5TG92 126 aa12.18□□□□□ -0.46
SYNC-201ENST00000373484 LINC00208Q96KT6 92 aa12.18□□□□□ -0.46
SYNC-201ENST00000373484 H0Y9P7 68 aa12.17□□□□□ -0.46
SYNC-201ENST00000373484 A0A0G2JQZ4 141 aa12.16□□□□□ -0.46
SYNC-201ENST00000373484 MT1HL1P0DM35 61 aa12.16□□□□□ -0.46
SYNC-201ENST00000373484 TNXBP22105 4242 aa12.15□□□□□ -0.46
SYNC-201ENST00000373484 KRTAP1-4P0C5Y4 121 aa12.15□□□□□ -0.46
SYNC-201ENST00000373484 DEFB116Q30KQ4 102 aa12.15□□□□□ -0.46
SYNC-201ENST00000373484 LIMD2Q9BT23 127 aa12.09□□□□□ -0.47
SYNC-201ENST00000373484 KRTAP10-8P60410 259 aa12.09□□□□□ -0.47
SYNC-201ENST00000373484 HERC1Q15751 4861 aa12.08□□□□□ -0.48
SYNC-201ENST00000373484 TP53AIP1Q9HCN2 124 aa12.07□□□□□ -0.48
SYNC-201ENST00000373484 PRR4Q16378 134 aa12.06□□□□□ -0.48
SYNC-201ENST00000373484 ASB16-AS1Q495Z4 193 aa12.06□□□□□ -0.48
SYNC-201ENST00000373484 PRR26Q8N8Z3 221 aa12.06□□□□□ -0.48
SYNC-201ENST00000373484 MMP24-AS1A0A0U1RRL7 71 aa12.05□□□□□ -0.48
SYNC-201ENST00000373484 IGLV7-46A0A075B6I9 117 aa12.02□□□□□ -0.48
SYNC-201ENST00000373484 PSPHP1O15172 72 aa12.02□□□□□ -0.48
SYNC-201ENST00000373484 MOBPQ13875 183 aa12.02□□□□□ -0.48
SYNC-201ENST00000373484 Q8N9P0 234 aaPredicted RBP12□□□□□ -0.49
SYNC-201ENST00000373484 ANAPC11Q9NYG5 84 aa12□□□□□ -0.49
SYNC-201ENST00000373484 A0A087X002 238 aa12□□□□□ -0.49
SYNC-201ENST00000373484 ZNF706Q9Y5V0 76 aaPredicted RBP11.99□□□□□ -0.49
SYNC-201ENST00000373484 A8MUN3 132 aa11.98□□□□□ -0.49
SYNC-201ENST00000373484 Q5VV11 94 aa11.98□□□□□ -0.49
SYNC-201ENST00000373484 LINC00483Q53H64 154 aa11.97□□□□□ -0.49
SYNC-201ENST00000373484 Q96NJ1 140 aa11.94□□□□□ -0.5
SYNC-201ENST00000373484 LOC101927531A0A1B0GV80 90 aa11.93□□□□□ -0.5
SYNC-201ENST00000373484 KRTAP13-2Q52LG2 175 aa11.93□□□□□ -0.5
SYNC-201ENST00000373484 PMAIP1Q13794 54 aa11.91□□□□□ -0.5
SYNC-201ENST00000373484 COA5Q86WW8 74 aa11.9□□□□□ -0.5
SYNC-201ENST00000373484 TYMSOSQ8TAI1 123 aa11.9□□□□□ -0.5
SYNC-201ENST00000373484 C8orf17Q9NRJ1 99 aa11.9□□□□□ -0.5
SYNC-201ENST00000373484 Q75L30 129 aa11.89□□□□□ -0.51
SYNC-201ENST00000373484 A0A1B0GVX0 72 aa11.86□□□□□ -0.51
SYNC-201ENST00000373484 CHKB-CPT1BH3BT56 60 aa11.84□□□□□ -0.51
SYNC-201ENST00000373484 PRR15LQ9BU68 103 aa11.83□□□□□ -0.51
SYNC-201ENST00000373484 CD164Q04900 197 aa11.8□□□□□ -0.52
SYNC-201ENST00000373484 MRPL34Q9BQ48 92 aaKnown RBP11.79□□□□□ -0.52
SYNC-201ENST00000373484 LINC01558Q9Y6Z2 57 aa11.79□□□□□ -0.52
SYNC-201ENST00000373484 IGLV9-49A0A0B4J1Y8 123 aa11.79□□□□□ -0.52
SYNC-201ENST00000373484 ATP11AUNQ6ZP68 121 aa11.77□□□□□ -0.52
SYNC-201ENST00000373484 LINC00304Q8N9R0 145 aa11.77□□□□□ -0.52
SYNC-201ENST00000373484 HMCN2Q8NDA2 5059 aa11.76□□□□□ -0.53
SYNC-201ENST00000373484 SEC61GP60059 68 aa11.76□□□□□ -0.53
SYNC-201ENST00000373484 PCOTHQ58A44 107 aa11.73□□□□□ -0.53
SYNC-201ENST00000373484 IGHV6-1A0A0B4J1U7 121 aa11.72□□□□□ -0.53
SYNC-201ENST00000373484 SSBP3-AS1Q7Z2R9 100 aa11.72□□□□□ -0.53
SYNC-201ENST00000373484 CDC42SE1Q9NRR8 79 aa11.7□□□□□ -0.54
SYNC-201ENST00000373484 SPAG11AQ6PDA7 123 aa11.69□□□□□ -0.54
SYNC-201ENST00000373484 A6NED7 52 aa11.68□□□□□ -0.54
SYNC-201ENST00000373484 NDUFS5O43920 106 aa11.67□□□□□ -0.54
SYNC-201ENST00000373484 LCA10Q71F78 164 aa11.66□□□□□ -0.54
SYNC-201ENST00000373484 HRES1P13985 223 aa11.65□□□□□ -0.54
SYNC-201ENST00000373484 C4orf48Q5BLP8 95 aa11.65□□□□□ -0.54
SYNC-201ENST00000373484 KRTAP13-3Q3SY46 172 aa11.62□□□□□ -0.55
SYNC-201ENST00000373484 A8MU10 97 aa11.61□□□□□ -0.55
SYNC-201ENST00000373484 C8orf87E5RJ46 101 aa11.61□□□□□ -0.55
SYNC-201ENST00000373484 SPINK1P00995 79 aa11.61□□□□□ -0.55
SYNC-201ENST00000373484 KTN1-AS1Q86SY8 53 aa11.61□□□□□ -0.55
SYNC-201ENST00000373484 RPS29P62273 56 aaKnown RBP11.57□□□□□ -0.56
SYNC-201ENST00000373484 A6NN06 94 aa11.56□□□□□ -0.56
SYNC-201ENST00000373484 NOTCH2NLQ7Z3S9 236 aa11.55□□□□□ -0.56
SYNC-201ENST00000373484 RETNLBQ9BQ08 111 aa11.54□□□□□ -0.56
SYNC-201ENST00000373484 ACYP2P14621 99 aa11.53□□□□□ -0.56
SYNC-201ENST00000373484 SPTSSBQ8NFR3 76 aa11.53□□□□□ -0.56
SYNC-201ENST00000373484 LRP2P98164 4655 aa11.49□□□□□ -0.57
SYNC-201ENST00000373484 Q5W150 140 aa11.49□□□□□ -0.57
SYNC-201ENST00000373484 LPAP08519 4548 aa11.48□□□□□ -0.57
SYNC-201ENST00000373484 DMAC1Q96GE9 116 aa11.46□□□□□ -0.58
SYNC-201ENST00000373484 SPINK7P58062 85 aa11.42□□□□□ -0.58
SYNC-201ENST00000373484 C7orf65Q6ZTY9 151 aa11.39□□□□□ -0.59
SYNC-201ENST00000373484 LINC00313P59037 77 aa11.37□□□□□ -0.59
SYNC-201ENST00000373484 UBR4Q5T4S7 5183 aa11.35□□□□□ -0.59
SYNC-201ENST00000373484 TPRXLQ17RH7 258 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms