RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 COL7A1Q02388 2944 aa5.01□□□□□ -1.61
GARNL3-201ENST00000373386 A8MUU9 505 aa5.01□□□□□ -1.61
GARNL3-201ENST00000373386 PRKDCP78527 4128 aaKnown RBP5□□□□□ -1.61
GARNL3-201ENST00000373386 IGLV5-52A0A0A0MRZ9 124 aa5□□□□□ -1.61
GARNL3-201ENST00000373386 HRES1P13985 223 aa5□□□□□ -1.61
GARNL3-201ENST00000373386 DNAH9Q9NYC9 4486 aa5□□□□□ -1.61
GARNL3-201ENST00000373386 APLNQ9ULZ1 77 aa4.99□□□□□ -1.61
GARNL3-201ENST00000373386 NUPR2A6NF83 97 aa4.99□□□□□ -1.61
GARNL3-201ENST00000373386 WFDC13Q8IUB5 93 aa4.99□□□□□ -1.61
GARNL3-201ENST00000373386 A0A096LNI7 61 aa4.98□□□□□ -1.61
GARNL3-201ENST00000373386 A0A1B0GU69 56 aa4.98□□□□□ -1.61
GARNL3-201ENST00000373386 PRLHP81277 87 aa4.97□□□□□ -1.61
GARNL3-201ENST00000373386 MEGF8Q7Z7M0 2845 aa4.97□□□□□ -1.61
GARNL3-201ENST00000373386 A0A0G2JQZ4 141 aa4.97□□□□□ -1.61
GARNL3-201ENST00000373386 A0A1W2PNN7 141 aa4.97□□□□□ -1.61
GARNL3-201ENST00000373386 KRTAP1-5Q9BYS1 174 aa4.97□□□□□ -1.61
GARNL3-201ENST00000373386 KRTAP29-1A8MX34 341 aaPredicted RBP4.96□□□□□ -1.62
GARNL3-201ENST00000373386 DEFB116Q30KQ4 102 aa4.96□□□□□ -1.62
GARNL3-201ENST00000373386 RPL37AP61513 92 aaKnown RBP4.94□□□□□ -1.62
GARNL3-201ENST00000373386 IGKV2-24A0A0C4DH68 120 aa4.94□□□□□ -1.62
GARNL3-201ENST00000373386 SPINT4Q6UDR6 99 aa4.94□□□□□ -1.62
GARNL3-201ENST00000373386 PCOTHQ58A44 107 aa4.94□□□□□ -1.62
GARNL3-201ENST00000373386 UBE2DNLQ8IWF7 75 aa4.93□□□□□ -1.62
GARNL3-201ENST00000373386 KRTAP21-3Q3LHN1 58 aa4.93□□□□□ -1.62
GARNL3-201ENST00000373386 KRTAP13-1Q8IUC0 172 aa4.92□□□□□ -1.62
GARNL3-201ENST00000373386 CIRBP-AS1Q8TBR5 109 aa4.92□□□□□ -1.62
GARNL3-201ENST00000373386 LINC00472Q9H8W2 130 aa4.92□□□□□ -1.62
GARNL3-201ENST00000373386 Q6ZRN7 208 aaPredicted RBP4.92□□□□□ -1.62
GARNL3-201ENST00000373386 NBDYA0A0U1RRE5 68 aa4.91□□□□□ -1.62
GARNL3-201ENST00000373386 Q5W150 140 aa4.91□□□□□ -1.62
GARNL3-201ENST00000373386 CSMD3Q7Z407 3707 aa4.9□□□□□ -1.63
GARNL3-201ENST00000373386 LYSTQ99698 3801 aa4.89□□□□□ -1.63
GARNL3-201ENST00000373386 STAB2Q8WWQ8 2551 aa4.89□□□□□ -1.63
GARNL3-201ENST00000373386 SPACA4Q8TDM5 124 aa4.88□□□□□ -1.63
GARNL3-201ENST00000373386 DNAH10Q8IVF4 4471 aa4.88□□□□□ -1.63
GARNL3-201ENST00000373386 KRTAP11-1Q8IUC1 163 aa4.88□□□□□ -1.63
GARNL3-201ENST00000373386 FBN3Q75N90 2809 aa4.87□□□□□ -1.63
GARNL3-201ENST00000373386 MMP24-AS1A0A0U1RRL7 71 aa4.87□□□□□ -1.63
GARNL3-201ENST00000373386 DNAH7Q8WXX0 4024 aa4.87□□□□□ -1.63
GARNL3-201ENST00000373386 A0A087WTM6 91 aa4.86□□□□□ -1.63
GARNL3-201ENST00000373386 KRTAP15-1Q3LI76 137 aa4.86□□□□□ -1.63
GARNL3-201ENST00000373386 TP53AIP1Q9HCN2 124 aa4.85□□□□□ -1.63
GARNL3-201ENST00000373386 TGP01266 2768 aa4.85□□□□□ -1.63
GARNL3-201ENST00000373386 A0A1B0GVX0 72 aa4.85□□□□□ -1.63
GARNL3-201ENST00000373386 ACYP2P14621 99 aa4.84□□□□□ -1.63
GARNL3-201ENST00000373386 STARD9Q9P2P6 4700 aa4.84□□□□□ -1.63
GARNL3-201ENST00000373386 PLECQ15149 4684 aaKnown RBP4.83□□□□□ -1.64
GARNL3-201ENST00000373386 VPS13DQ5THJ4 4388 aa4.83□□□□□ -1.64
GARNL3-201ENST00000373386 TENM2Q9NT68 2774 aa4.82□□□□□ -1.64
GARNL3-201ENST00000373386 Q96NJ1 140 aa4.81□□□□□ -1.64
GARNL3-201ENST00000373386 LINC00304Q8N9R0 145 aa4.81□□□□□ -1.64
GARNL3-201ENST00000373386 IGLV7-43P04211 117 aa4.8□□□□□ -1.64
GARNL3-201ENST00000373386 CAMK2N1Q7Z7J9 78 aa4.8□□□□□ -1.64
GARNL3-201ENST00000373386 PANO1I0J062 215 aa4.8□□□□□ -1.64
GARNL3-201ENST00000373386 WWC2-AS2Q96NR7 200 aa4.78□□□□□ -1.64
GARNL3-201ENST00000373386 HECTD4Q9Y4D8 3996 aa4.78□□□□□ -1.64
GARNL3-201ENST00000373386 SSBP3-AS1Q7Z2R9 100 aa4.78□□□□□ -1.64
GARNL3-201ENST00000373386 DNAH6Q9C0G6 4158 aa4.77□□□□□ -1.65
GARNL3-201ENST00000373386 DNAH17Q9UFH2 4485 aa4.76□□□□□ -1.65
GARNL3-201ENST00000373386 MRPL34Q9BQ48 92 aaKnown RBP4.76□□□□□ -1.65
GARNL3-201ENST00000373386 PSORS1C2Q9UIG4 136 aa4.75□□□□□ -1.65
GARNL3-201ENST00000373386 KMT2AQ03164 3969 aa4.74□□□□□ -1.65
GARNL3-201ENST00000373386 ALMS1Q8TCU4 4167 aa4.72□□□□□ -1.65
GARNL3-201ENST00000373386 DNAH2Q9P225 4427 aa4.72□□□□□ -1.65
GARNL3-201ENST00000373386 DNAH8Q96JB1 4490 aa4.7□□□□□ -1.66
GARNL3-201ENST00000373386 CRIPTQ9P021 101 aa4.69□□□□□ -1.66
GARNL3-201ENST00000373386 HYDINQ4G0P3 5121 aa4.69□□□□□ -1.66
GARNL3-201ENST00000373386 KRTAP13-3Q3SY46 172 aa4.67□□□□□ -1.66
GARNL3-201ENST00000373386 ANAPC11Q9NYG5 84 aa4.66□□□□□ -1.66
GARNL3-201ENST00000373386 SRRM2Q9UQ35 2752 aaKnown RBP4.66□□□□□ -1.66
GARNL3-201ENST00000373386 SPINK6Q6UWN8 80 aa4.65□□□□□ -1.66
GARNL3-201ENST00000373386 Q6ZSA8 131 aa4.65□□□□□ -1.66
GARNL3-201ENST00000373386 SACSQ9NZJ4 4579 aa4.65□□□□□ -1.67
GARNL3-201ENST00000373386 FAM229AH3BQW9 127 aa4.65□□□□□ -1.67
GARNL3-201ENST00000373386 LY6G6CO95867 125 aa4.63□□□□□ -1.67
GARNL3-201ENST00000373386 FRAS1Q86XX4 4008 aa4.63□□□□□ -1.67
GARNL3-201ENST00000373386 KMT2CQ8NEZ4 4911 aaKnown RBP4.62□□□□□ -1.67
GARNL3-201ENST00000373386 DNAH5Q8TE73 4624 aa4.61□□□□□ -1.67
GARNL3-201ENST00000373386 DNAH11Q96DT5 4516 aa4.6□□□□□ -1.67
GARNL3-201ENST00000373386 H0YAA0 97 aa4.59□□□□□ -1.67
GARNL3-201ENST00000373386 FAT2Q9NYQ8 4349 aa4.57□□□□□ -1.68
GARNL3-201ENST00000373386 A0A1B0GU33 70 aa4.57□□□□□ -1.68
GARNL3-201ENST00000373386 IGKV2-30P06310 120 aa4.57□□□□□ -1.68
GARNL3-201ENST00000373386 KRTAP10-2P60368 255 aa4.56□□□□□ -1.68
GARNL3-201ENST00000373386 RPS29P62273 56 aaKnown RBP4.56□□□□□ -1.68
GARNL3-201ENST00000373386 PKD1P98161 4303 aa4.56□□□□□ -1.68
GARNL3-201ENST00000373386 KRTAP13-2Q52LG2 175 aa4.56□□□□□ -1.68
GARNL3-201ENST00000373386 RYR2Q92736 4967 aa4.55□□□□□ -1.68
GARNL3-201ENST00000373386 TPRXLQ17RH7 258 aa4.55□□□□□ -1.68
GARNL3-201ENST00000373386 KRTAP1-4P0C5Y4 121 aa4.55□□□□□ -1.68
GARNL3-201ENST00000373386 RYR3Q15413 4870 aa4.53□□□□□ -1.68
GARNL3-201ENST00000373386 KRTAP10-1P60331 282 aa4.52□□□□□ -1.69
GARNL3-201ENST00000373386 SPINK1P00995 79 aa4.52□□□□□ -1.69
GARNL3-201ENST00000373386 PKHD1P08F94 4074 aa4.5□□□□□ -1.69
GARNL3-201ENST00000373386 FLG2Q5D862 2391 aaPredicted RBP4.5□□□□□ -1.69
GARNL3-201ENST00000373386 IGKV2D-30A0A075B6S6 120 aa4.48□□□□□ -1.69
GARNL3-201ENST00000373386 LRP1BQ9NZR2 4599 aa4.47□□□□□ -1.69
GARNL3-201ENST00000373386 TYMSOSQ8TAI1 123 aa4.45□□□□□ -1.7
GARNL3-201ENST00000373386 VPS13BQ7Z7G8 4022 aa4.44□□□□□ -1.7
GARNL3-201ENST00000373386 KRTAP23-1A1A580 65 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms