RNA–Protein interactions for RNA: ENST00000373020.8

TSPAN6-201, Transcript of tetraspanin 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN6, Length 2,206 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN6-201ENST00000373020 LY6G6CO95867 125 aa7.38□□□□□ -1.23
TSPAN6-201ENST00000373020 NOTCH2NLQ7Z3S9 236 aa7.38□□□□□ -1.23
TSPAN6-201ENST00000373020 CIRBP-AS1Q8TBR5 109 aa7.37□□□□□ -1.23
TSPAN6-201ENST00000373020 KRTAP10-2P60368 255 aa7.36□□□□□ -1.23
TSPAN6-201ENST00000373020 BRK1Q8WUW1 75 aa7.36□□□□□ -1.23
TSPAN6-201ENST00000373020 SSBP3-AS1Q7Z2R9 100 aa7.36□□□□□ -1.23
TSPAN6-201ENST00000373020 V9GYY9 64 aa7.35□□□□□ -1.23
TSPAN6-201ENST00000373020 PKD1P98161 4303 aa7.35□□□□□ -1.23
TSPAN6-201ENST00000373020 Q6ZSA8 131 aa7.34□□□□□ -1.23
TSPAN6-201ENST00000373020 NDUFS5O43920 106 aa7.33□□□□□ -1.24
TSPAN6-201ENST00000373020 FAT2Q9NYQ8 4349 aa7.33□□□□□ -1.24
TSPAN6-201ENST00000373020 PCOTHQ58A44 107 aa7.33□□□□□ -1.24
TSPAN6-201ENST00000373020 KRTAP13-3Q3SY46 172 aa7.32□□□□□ -1.24
TSPAN6-201ENST00000373020 COA5Q86WW8 74 aa7.32□□□□□ -1.24
TSPAN6-201ENST00000373020 C1orf195Q5TG92 126 aa7.31□□□□□ -1.24
TSPAN6-201ENST00000373020 LRP1BQ9NZR2 4599 aa7.31□□□□□ -1.24
TSPAN6-201ENST00000373020 SPINK6Q6UWN8 80 aa7.31□□□□□ -1.24
TSPAN6-201ENST00000373020 Q8N9P0 234 aaPredicted RBP7.31□□□□□ -1.24
TSPAN6-201ENST00000373020 PSPHP1O15172 72 aa7.3□□□□□ -1.24
TSPAN6-201ENST00000373020 C8orf87E5RJ46 101 aa7.29□□□□□ -1.24
TSPAN6-201ENST00000373020 LOC101927531A0A1B0GV80 90 aa7.28□□□□□ -1.24
TSPAN6-201ENST00000373020 A8MUN3 132 aa7.28□□□□□ -1.24
TSPAN6-201ENST00000373020 KRTAP10-1P60331 282 aa7.28□□□□□ -1.24
TSPAN6-201ENST00000373020 KRTAP13-2Q52LG2 175 aa7.28□□□□□ -1.24
TSPAN6-201ENST00000373020 LIMD2Q9BT23 127 aa7.27□□□□□ -1.25
TSPAN6-201ENST00000373020 Q5VV11 94 aa7.27□□□□□ -1.25
TSPAN6-201ENST00000373020 Q5W150 140 aa7.27□□□□□ -1.25
TSPAN6-201ENST00000373020 HYDINQ4G0P3 5121 aa7.25□□□□□ -1.25
TSPAN6-201ENST00000373020 KRTAP1-4P0C5Y4 121 aa7.23□□□□□ -1.25
TSPAN6-201ENST00000373020 VPS13BQ7Z7G8 4022 aa7.22□□□□□ -1.25
TSPAN6-201ENST00000373020 HRES1P13985 223 aa7.21□□□□□ -1.25
TSPAN6-201ENST00000373020 LINC00313P59037 77 aa7.2□□□□□ -1.26
TSPAN6-201ENST00000373020 PRR15LQ9BU68 103 aa7.2□□□□□ -1.26
TSPAN6-201ENST00000373020 Q75L30 129 aa7.18□□□□□ -1.26
TSPAN6-201ENST00000373020 KRTAP16-1A8MUX0 517 aa7.17□□□□□ -1.26
TSPAN6-201ENST00000373020 FAM229AH3BQW9 127 aa7.17□□□□□ -1.26
TSPAN6-201ENST00000373020 LINC01558Q9Y6Z2 57 aa7.17□□□□□ -1.26
TSPAN6-201ENST00000373020 CHKB-CPT1BH3BT56 60 aa7.14□□□□□ -1.27
TSPAN6-201ENST00000373020 SACSQ9NZJ4 4579 aa7.14□□□□□ -1.27
TSPAN6-201ENST00000373020 IGKV2-30P06310 120 aa7.12□□□□□ -1.27
TSPAN6-201ENST00000373020 SPAG11AQ6PDA7 123 aa7.12□□□□□ -1.27
TSPAN6-201ENST00000373020 DMAC1Q96GE9 116 aa7.11□□□□□ -1.27
TSPAN6-201ENST00000373020 A8MU10 97 aa7.11□□□□□ -1.27
TSPAN6-201ENST00000373020 KRTAP21-3Q3LHN1 58 aa7.1□□□□□ -1.27
TSPAN6-201ENST00000373020 PKHD1P08F94 4074 aa7.1□□□□□ -1.27
TSPAN6-201ENST00000373020 ACYP2P14621 99 aa7.09□□□□□ -1.27
TSPAN6-201ENST00000373020 PLA2G1BP04054 148 aaKnown RBP7.08□□□□□ -1.28
TSPAN6-201ENST00000373020 SPINK1P00995 79 aa7.08□□□□□ -1.28
TSPAN6-201ENST00000373020 TYMSOSQ8TAI1 123 aa7.07□□□□□ -1.28
TSPAN6-201ENST00000373020 LCA10Q71F78 164 aa7.06□□□□□ -1.28
TSPAN6-201ENST00000373020 PRR26Q8N8Z3 221 aa7.06□□□□□ -1.28
TSPAN6-201ENST00000373020 RETNLBQ9BQ08 111 aa7.06□□□□□ -1.28
TSPAN6-201ENST00000373020 DYNC1H1Q14204 4646 aaKnown RBP7.06□□□□□ -1.28
TSPAN6-201ENST00000373020 A6NED7 52 aa7.05□□□□□ -1.28
TSPAN6-201ENST00000373020 C4orf48Q5BLP8 95 aa7.05□□□□□ -1.28
TSPAN6-201ENST00000373020 RPS29P62273 56 aaKnown RBP7.04□□□□□ -1.28
TSPAN6-201ENST00000373020 CDC42SE1Q9NRR8 79 aa7.03□□□□□ -1.28
TSPAN6-201ENST00000373020 PKHD1L1Q86WI1 4243 aa7.01□□□□□ -1.29
TSPAN6-201ENST00000373020 LINC00304Q8N9R0 145 aa7□□□□□ -1.29
TSPAN6-201ENST00000373020 APOBP04114 4563 aaKnown RBP6.99□□□□□ -1.29
TSPAN6-201ENST00000373020 ATP11AUNQ6ZP68 121 aa6.99□□□□□ -1.29
TSPAN6-201ENST00000373020 SPINK7P58062 85 aa6.98□□□□□ -1.29
TSPAN6-201ENST00000373020 IGKV2D-30A0A075B6S6 120 aa6.97□□□□□ -1.29
TSPAN6-201ENST00000373020 PMAIP1Q13794 54 aa6.96□□□□□ -1.29
TSPAN6-201ENST00000373020 A0A1B0GVY2 172 aa6.95□□□□□ -1.3
TSPAN6-201ENST00000373020 KRTAP10-4P60372 401 aaPredicted RBP6.94□□□□□ -1.3
TSPAN6-201ENST00000373020 FAT1Q14517 4588 aa6.93□□□□□ -1.3
TSPAN6-201ENST00000373020 SPTSSBQ8NFR3 76 aa6.92□□□□□ -1.3
TSPAN6-201ENST00000373020 A6NN06 94 aa6.91□□□□□ -1.3
TSPAN6-201ENST00000373020 C7orf65Q6ZTY9 151 aa6.91□□□□□ -1.3
TSPAN6-201ENST00000373020 SMR3BP02814 79 aaPredicted RBP6.9□□□□□ -1.3
TSPAN6-201ENST00000373020 RYR2Q92736 4967 aa6.88□□□□□ -1.31
TSPAN6-201ENST00000373020 A0A1B0GU69 56 aa6.86□□□□□ -1.31
TSPAN6-201ENST00000373020 C20orf166-AS1Q96NR2 134 aa6.86□□□□□ -1.31
TSPAN6-201ENST00000373020 A8MUU9 505 aa6.86□□□□□ -1.31
TSPAN6-201ENST00000373020 KTN1-AS1Q86SY8 53 aa6.85□□□□□ -1.31
TSPAN6-201ENST00000373020 Q8N1X5 172 aa6.8□□□□□ -1.32
TSPAN6-201ENST00000373020 C9orf92A6NGG3 77 aa6.8□□□□□ -1.32
TSPAN6-201ENST00000373020 SPATA8Q6RVD6 105 aa6.8□□□□□ -1.32
TSPAN6-201ENST00000373020 UQCR11O14957 56 aa6.75□□□□□ -1.33
TSPAN6-201ENST00000373020 KMT2CQ8NEZ4 4911 aaKnown RBP6.73□□□□□ -1.33
TSPAN6-201ENST00000373020 FLG2Q5D862 2391 aaPredicted RBP6.73□□□□□ -1.33
TSPAN6-201ENST00000373020 MIR22HGQ0VDD5 57 aa6.73□□□□□ -1.33
TSPAN6-201ENST00000373020 FAT3Q8TDW7 4589 aa6.73□□□□□ -1.33
TSPAN6-201ENST00000373020 TNXBP22105 4242 aa6.72□□□□□ -1.33
TSPAN6-201ENST00000373020 KRTAP3-1Q9BYR8 98 aa6.72□□□□□ -1.33
TSPAN6-201ENST00000373020 SEC61GP60059 68 aa6.71□□□□□ -1.34
TSPAN6-201ENST00000373020 HSPG2P98160 4391 aa6.67□□□□□ -1.34
TSPAN6-201ENST00000373020 LRP1Q07954 4544 aaKnown RBP6.65□□□□□ -1.34
TSPAN6-201ENST00000373020 KRTAP10-8P60410 259 aa6.64□□□□□ -1.35
TSPAN6-201ENST00000373020 RBM12B-AS1Q9P1G2 102 aa6.63□□□□□ -1.35
TSPAN6-201ENST00000373020 COX6B2Q6YFQ2 88 aa6.61□□□□□ -1.35
TSPAN6-201ENST00000373020 RYR1P21817 5038 aa6.59□□□□□ -1.35
TSPAN6-201ENST00000373020 Q5VSD8 79 aa6.58□□□□□ -1.36
TSPAN6-201ENST00000373020 H0YAA0 97 aa6.56□□□□□ -1.36
TSPAN6-201ENST00000373020 RPL37P61927 97 aaKnown RBP6.54□□□□□ -1.36
TSPAN6-201ENST00000373020 RYR3Q15413 4870 aa6.53□□□□□ -1.36
TSPAN6-201ENST00000373020 H1FX-AS1Q4G0G2 97 aa6.52□□□□□ -1.37
TSPAN6-201ENST00000373020 ADM2Q7Z4H4 148 aa6.52□□□□□ -1.37
TSPAN6-201ENST00000373020 PRAC1Q96KF2 57 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms