RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 LRBAP50851 2863 aa6.16□□□□□ -1.42
NUP188-201ENST00000372577 Q5VSD8 79 aa6.16□□□□□ -1.42
NUP188-201ENST00000372577 STAB1Q9NY15 2570 aa6.15□□□□□ -1.42
NUP188-201ENST00000372577 CELSR1Q9NYQ6 3014 aa6.15□□□□□ -1.42
NUP188-201ENST00000372577 KRTAP7-1Q8IUC3 87 aa6.14□□□□□ -1.43
NUP188-201ENST00000372577 SEC61BP60468 96 aaKnown RBP6.13□□□□□ -1.43
NUP188-201ENST00000372577 CSMD1Q96PZ7 3565 aa6.13□□□□□ -1.43
NUP188-201ENST00000372577 NOTCH1P46531 2555 aa6.12□□□□□ -1.43
NUP188-201ENST00000372577 KRTAP13-1Q8IUC0 172 aa6.12□□□□□ -1.43
NUP188-201ENST00000372577 UBR5O95071 2799 aaPredicted RBP6.1□□□□□ -1.43
NUP188-201ENST00000372577 NBEAL1Q6ZS30 2694 aa6.1□□□□□ -1.43
NUP188-201ENST00000372577 CSMD2Q7Z408 3487 aa6.1□□□□□ -1.43
NUP188-201ENST00000372577 A0A087X002 238 aa6.1□□□□□ -1.43
NUP188-201ENST00000372577 KRTAP21-3Q3LHN1 58 aa6.1□□□□□ -1.43
NUP188-201ENST00000372577 OXTP01178 125 aa6.1□□□□□ -1.43
NUP188-201ENST00000372577 NBEAL2Q6ZNJ1 2754 aa6.1□□□□□ -1.43
NUP188-201ENST00000372577 KRTAP11-1Q8IUC1 163 aa6.1□□□□□ -1.43
NUP188-201ENST00000372577 BSNQ9UPA5 3926 aa6.08□□□□□ -1.44
NUP188-201ENST00000372577 FLG2Q5D862 2391 aaPredicted RBP6.08□□□□□ -1.44
NUP188-201ENST00000372577 NSD1Q96L73 2696 aaPredicted RBP6.08□□□□□ -1.44
NUP188-201ENST00000372577 KRTAP16-1A8MUX0 517 aa6.06□□□□□ -1.44
NUP188-201ENST00000372577 PRAC1Q96KF2 57 aa6.03□□□□□ -1.44
NUP188-201ENST00000372577 H1FX-AS1Q4G0G2 97 aa6□□□□□ -1.45
NUP188-201ENST00000372577 NOTCH2NLQ7Z3S9 236 aa6□□□□□ -1.45
NUP188-201ENST00000372577 ZFHX3Q15911 3703 aa6□□□□□ -1.45
NUP188-201ENST00000372577 NIPBLQ6KC79 2804 aaeCLIP5.99□□□□□ -1.45
NUP188-201ENST00000372577 RPL37P61927 97 aaKnown RBP5.98□□□□□ -1.45
NUP188-201ENST00000372577 KRTAP13-2Q52LG2 175 aa5.98□□□□□ -1.45
NUP188-201ENST00000372577 R4GN34 69 aa5.98□□□□□ -1.45
NUP188-201ENST00000372577 OTOGQ6ZRI0 2925 aa5.97□□□□□ -1.45
NUP188-201ENST00000372577 ZANQ9Y493 2812 aa5.96□□□□□ -1.46
NUP188-201ENST00000372577 APCP25054 2843 aa5.96□□□□□ -1.46
NUP188-201ENST00000372577 HIVEP1P15822 2718 aa5.95□□□□□ -1.46
NUP188-201ENST00000372577 SPATA8Q6RVD6 105 aa5.92□□□□□ -1.46
NUP188-201ENST00000372577 PLAC4Q8WY50 150 aa5.92□□□□□ -1.46
NUP188-201ENST00000372577 ROMO1P60602 79 aa5.91□□□□□ -1.46
NUP188-201ENST00000372577 NBPF19A0A087WUL8 3843 aa5.89□□□□□ -1.47
NUP188-201ENST00000372577 STAB2Q8WWQ8 2551 aa5.87□□□□□ -1.47
NUP188-201ENST00000372577 SVEP1Q4LDE5 3571 aa5.87□□□□□ -1.47
NUP188-201ENST00000372577 M0QZ58 72 aa5.86□□□□□ -1.47
NUP188-201ENST00000372577 HRNRQ86YZ3 2850 aaPredicted RBP5.86□□□□□ -1.47
NUP188-201ENST00000372577 PDZD2O15018 2839 aa5.86□□□□□ -1.47
NUP188-201ENST00000372577 FBN2P35556 2912 aa5.86□□□□□ -1.47
NUP188-201ENST00000372577 NF1P21359 2839 aa5.85□□□□□ -1.47
NUP188-201ENST00000372577 ADM2Q7Z4H4 148 aa5.85□□□□□ -1.47
NUP188-201ENST00000372577 A8MUU9 505 aa5.83□□□□□ -1.48
NUP188-201ENST00000372577 VPS13CQ709C8 3753 aa5.82□□□□□ -1.48
NUP188-201ENST00000372577 C20orf166-AS1Q96NR2 134 aa5.82□□□□□ -1.48
NUP188-201ENST00000372577 DMBT1Q9UGM3 2413 aaPredicted RBP5.78□□□□□ -1.48
NUP188-201ENST00000372577 KRTAP1-4P0C5Y4 121 aa5.77□□□□□ -1.49
NUP188-201ENST00000372577 A6NN06 94 aa5.77□□□□□ -1.49
NUP188-201ENST00000372577 ZNF469Q96JG9 3925 aaPredicted RBP5.75□□□□□ -1.49
NUP188-201ENST00000372577 CUBNO60494 3623 aa5.74□□□□□ -1.49
NUP188-201ENST00000372577 MXRA5Q9NR99 2828 aa5.7□□□□□ -1.5
NUP188-201ENST00000372577 KRTAP25-1Q3LHN0 102 aa5.65□□□□□ -1.5
NUP188-201ENST00000372577 A8MU10 97 aa5.65□□□□□ -1.5
NUP188-201ENST00000372577 NDUFAF8A1L188 74 aa5.65□□□□□ -1.51
NUP188-201ENST00000372577 XP32Q5T750 250 aa5.61□□□□□ -1.51
NUP188-201ENST00000372577 TPRXLQ17RH7 258 aa5.58□□□□□ -1.52
NUP188-201ENST00000372577 FBN1P35555 2871 aaKnown RBP5.57□□□□□ -1.52
NUP188-201ENST00000372577 PKD1L1Q8TDX9 2849 aa5.56□□□□□ -1.52
NUP188-201ENST00000372577 TENM1Q9UKZ4 2725 aa5.55□□□□□ -1.52
NUP188-201ENST00000372577 A0A1B0GVY2 172 aa5.5□□□□□ -1.53
NUP188-201ENST00000372577 KRTAP13-3Q3SY46 172 aa5.49□□□□□ -1.53
NUP188-201ENST00000372577 VWFP04275 2813 aa5.48□□□□□ -1.53
NUP188-201ENST00000372577 TNP1P09430 55 aa5.48□□□□□ -1.53
NUP188-201ENST00000372577 AKAP9Q99996 3911 aa5.46□□□□□ -1.54
NUP188-201ENST00000372577 KRTAP10-8P60410 259 aa5.45□□□□□ -1.54
NUP188-201ENST00000372577 DNHD1Q96M86 4753 aa5.45□□□□□ -1.54
NUP188-201ENST00000372577 TGP01266 2768 aa5.45□□□□□ -1.54
NUP188-201ENST00000372577 PP632Q6XCG6 107 aa5.43□□□□□ -1.54
NUP188-201ENST00000372577 TENM3Q9P273 2699 aa5.43□□□□□ -1.54
NUP188-201ENST00000372577 H0YAA0 97 aa5.43□□□□□ -1.54
NUP188-201ENST00000372577 C10orf95Q9H7T3 257 aa5.38□□□□□ -1.55
NUP188-201ENST00000372577 TENM2Q9NT68 2774 aa5.33□□□□□ -1.56
NUP188-201ENST00000372577 TRRAPQ9Y4A5 3859 aa5.3□□□□□ -1.56
NUP188-201ENST00000372577 ANK3Q12955 4377 aaKnown RBP5.29□□□□□ -1.56
NUP188-201ENST00000372577 P0C880 135 aa5.28□□□□□ -1.56
NUP188-201ENST00000372577 FBN3Q75N90 2809 aa5.24□□□□□ -1.57
NUP188-201ENST00000372577 MEGF8Q7Z7M0 2845 aa5.2□□□□□ -1.58
NUP188-201ENST00000372577 KRTAP10-10P60014 251 aa5.19□□□□□ -1.58
NUP188-201ENST00000372577 PRO2289Q9P1D8 64 aa5.18□□□□□ -1.58
NUP188-201ENST00000372577 COL7A1Q02388 2944 aa5.16□□□□□ -1.58
NUP188-201ENST00000372577 KRTAP3-1Q9BYR8 98 aa5.14□□□□□ -1.59
NUP188-201ENST00000372577 KRTAP12-2P59991 146 aa5.08□□□□□ -1.6
NUP188-201ENST00000372577 KRTAP12-1P59990 96 aa5.05□□□□□ -1.6
NUP188-201ENST00000372577 KRTAP13-4Q3LI77 160 aa5.05□□□□□ -1.6
NUP188-201ENST00000372577 MT1HL1P0DM35 61 aa5□□□□□ -1.61
NUP188-201ENST00000372577 CSMD3Q7Z407 3707 aa5□□□□□ -1.61
NUP188-201ENST00000372577 KRTAP10-6P60371 365 aaPredicted RBP4.99□□□□□ -1.61
NUP188-201ENST00000372577 KRTAP10-4P60372 401 aaPredicted RBP4.98□□□□□ -1.61
NUP188-201ENST00000372577 HUWE1Q7Z6Z7 4374 aaKnown RBP4.96□□□□□ -1.61
NUP188-201ENST00000372577 ANK2Q01484 3957 aa4.95□□□□□ -1.62
NUP188-201ENST00000372577 PRKDCP78527 4128 aaKnown RBP4.93□□□□□ -1.62
NUP188-201ENST00000372577 ALMS1Q8TCU4 4167 aa4.9□□□□□ -1.62
NUP188-201ENST00000372577 KMT2CQ8NEZ4 4911 aaKnown RBP4.88□□□□□ -1.63
NUP188-201ENST00000372577 KRTAP3-3Q9BYR6 98 aa4.85□□□□□ -1.63
NUP188-201ENST00000372577 KRTAP3-2Q9BYR7 98 aa4.84□□□□□ -1.63
NUP188-201ENST00000372577 SRRM2Q9UQ35 2752 aaKnown RBP4.76□□□□□ -1.65
NUP188-201ENST00000372577 DNAH9Q9NYC9 4486 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms