RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 PLA2G1BP04054 148 aaKnown RBP14.59□□□□□ -0.07
CTSA-203ENST00000372459 APOBP04114 4563 aaKnown RBP14.58□□□□□ -0.08
CTSA-203ENST00000372459 CDK2AP2O75956 126 aa14.58□□□□□ -0.08
CTSA-203ENST00000372459 MP68P56378 58 aa14.56□□□□□ -0.08
CTSA-203ENST00000372459 MMP24-AS1A0A0U1RRL7 71 aa14.54□□□□□ -0.08
CTSA-203ENST00000372459 ASB16-AS1Q495Z4 193 aa14.54□□□□□ -0.08
CTSA-203ENST00000372459 A0A1B0GVX0 72 aa14.53□□□□□ -0.08
CTSA-203ENST00000372459 hDV103S1A0JD37 113 aa14.51□□□□□ -0.09
CTSA-203ENST00000372459 H3BPC8 53 aa14.51□□□□□ -0.09
CTSA-203ENST00000372459 CYP4F30PQ9H0H9 118 aa14.5□□□□□ -0.09
CTSA-203ENST00000372459 TYMSOSQ8TAI1 123 aa14.49□□□□□ -0.09
CTSA-203ENST00000372459 IGHV6-1A0A0B4J1U7 121 aa14.49□□□□□ -0.09
CTSA-203ENST00000372459 C8orf17Q9NRJ1 99 aa14.49□□□□□ -0.09
CTSA-203ENST00000372459 TRAV22A0A0B4J277 110 aa14.47□□□□□ -0.09
CTSA-203ENST00000372459 KRTAP10-4P60372 401 aaPredicted RBP14.45□□□□□ -0.1
CTSA-203ENST00000372459 H0Y9P7 68 aa14.43□□□□□ -0.1
CTSA-203ENST00000372459 C1orf64Q8NEQ6 169 aa14.43□□□□□ -0.1
CTSA-203ENST00000372459 LIMD2Q9BT23 127 aa14.43□□□□□ -0.1
CTSA-203ENST00000372459 C4orf48Q5BLP8 95 aa14.43□□□□□ -0.1
CTSA-203ENST00000372459 LINC00208Q96KT6 92 aa14.43□□□□□ -0.1
CTSA-203ENST00000372459 FAT1Q14517 4588 aa14.41□□□□□ -0.1
CTSA-203ENST00000372459 PRR26Q8N8Z3 221 aa14.38□□□□□ -0.11
CTSA-203ENST00000372459 MPLKIPQ8TAP9 179 aa14.37□□□□□ -0.11
CTSA-203ENST00000372459 RYR3Q15413 4870 aa14.37□□□□□ -0.11
CTSA-203ENST00000372459 SPINK1P00995 79 aa14.36□□□□□ -0.11
CTSA-203ENST00000372459 C1orf195Q5TG92 126 aa14.36□□□□□ -0.11
CTSA-203ENST00000372459 SPANXA2-OT1Q8N9U9 137 aa14.36□□□□□ -0.11
CTSA-203ENST00000372459 NOTCH2NLQ7Z3S9 236 aa14.34□□□□□ -0.11
CTSA-203ENST00000372459 MRPL34Q9BQ48 92 aaKnown RBP14.33□□□□□ -0.12
CTSA-203ENST00000372459 PRO0628Q9UI54 55 aa14.31□□□□□ -0.12
CTSA-203ENST00000372459 C8orf87E5RJ46 101 aa14.31□□□□□ -0.12
CTSA-203ENST00000372459 LINC00304Q8N9R0 145 aa14.31□□□□□ -0.12
CTSA-203ENST00000372459 TP53AIP1Q9HCN2 124 aa14.31□□□□□ -0.12
CTSA-203ENST00000372459 PRR4Q16378 134 aa14.29□□□□□ -0.12
CTSA-203ENST00000372459 SPAG11AQ6PDA7 123 aa14.29□□□□□ -0.12
CTSA-203ENST00000372459 FAM229AH3BQW9 127 aa14.28□□□□□ -0.12
CTSA-203ENST00000372459 Q1T7F1 81 aa14.28□□□□□ -0.12
CTSA-203ENST00000372459 RPS29P62273 56 aaKnown RBP14.26□□□□□ -0.13
CTSA-203ENST00000372459 NDUFS5O43920 106 aa14.25□□□□□ -0.13
CTSA-203ENST00000372459 LINC00313P59037 77 aa14.22□□□□□ -0.13
CTSA-203ENST00000372459 Q5VSD8 79 aa14.14□□□□□ -0.15
CTSA-203ENST00000372459 PKHD1L1Q86WI1 4243 aa14.14□□□□□ -0.15
CTSA-203ENST00000372459 BRK1Q8WUW1 75 aa14.13□□□□□ -0.15
CTSA-203ENST00000372459 V9GYY9 64 aa14.13□□□□□ -0.15
CTSA-203ENST00000372459 HSPG2P98160 4391 aa14.12□□□□□ -0.15
CTSA-203ENST00000372459 IGLV7-46A0A075B6I9 117 aa14.11□□□□□ -0.15
CTSA-203ENST00000372459 RYR1P21817 5038 aa14.07□□□□□ -0.16
CTSA-203ENST00000372459 Q8N9P0 234 aaPredicted RBP14.05□□□□□ -0.16
CTSA-203ENST00000372459 KRTAP16-1A8MUX0 517 aa14.03□□□□□ -0.16
CTSA-203ENST00000372459 PCOTHQ58A44 107 aa14□□□□□ -0.17
CTSA-203ENST00000372459 PSPHP1O15172 72 aa13.98□□□□□ -0.17
CTSA-203ENST00000372459 Q5W150 140 aa13.98□□□□□ -0.17
CTSA-203ENST00000372459 COA5Q86WW8 74 aa13.98□□□□□ -0.17
CTSA-203ENST00000372459 KRTAP13-3Q3SY46 172 aa13.96□□□□□ -0.18
CTSA-203ENST00000372459 LOC101927531A0A1B0GV80 90 aa13.92□□□□□ -0.18
CTSA-203ENST00000372459 A8MUN3 132 aa13.91□□□□□ -0.18
CTSA-203ENST00000372459 KRTAP10-8P60410 259 aa13.91□□□□□ -0.18
CTSA-203ENST00000372459 KRTAP17-1Q9BYP8 105 aa13.89□□□□□ -0.19
CTSA-203ENST00000372459 Q8N1X5 172 aa13.88□□□□□ -0.19
CTSA-203ENST00000372459 Q5VV11 94 aa13.87□□□□□ -0.19
CTSA-203ENST00000372459 KIAA1109Q2LD37 5005 aa13.86□□□□□ -0.19
CTSA-203ENST00000372459 LRP1Q07954 4544 aaKnown RBP13.85□□□□□ -0.19
CTSA-203ENST00000372459 TNXBP22105 4242 aa13.84□□□□□ -0.19
CTSA-203ENST00000372459 EPPK1P58107 5090 aaKnown RBP13.84□□□□□ -0.19
CTSA-203ENST00000372459 RETNLBQ9BQ08 111 aa13.83□□□□□ -0.2
CTSA-203ENST00000372459 FLG2Q5D862 2391 aaPredicted RBP13.78□□□□□ -0.2
CTSA-203ENST00000372459 PRR15LQ9BU68 103 aa13.78□□□□□ -0.2
CTSA-203ENST00000372459 FAT3Q8TDW7 4589 aa13.77□□□□□ -0.21
CTSA-203ENST00000372459 C9orf92A6NGG3 77 aa13.75□□□□□ -0.21
CTSA-203ENST00000372459 HRES1P13985 223 aa13.75□□□□□ -0.21
CTSA-203ENST00000372459 Q75L30 129 aa13.73□□□□□ -0.21
CTSA-203ENST00000372459 IGKV2-30P06310 120 aa13.72□□□□□ -0.21
CTSA-203ENST00000372459 CHKB-CPT1BH3BT56 60 aa13.7□□□□□ -0.22
CTSA-203ENST00000372459 LINC01558Q9Y6Z2 57 aa13.7□□□□□ -0.22
CTSA-203ENST00000372459 C20orf166-AS1Q96NR2 134 aa13.67□□□□□ -0.22
CTSA-203ENST00000372459 A8MUU9 505 aa13.65□□□□□ -0.22
CTSA-203ENST00000372459 MT1HL1P0DM35 61 aa13.62□□□□□ -0.23
CTSA-203ENST00000372459 IGKV2D-30A0A075B6S6 120 aa13.61□□□□□ -0.23
CTSA-203ENST00000372459 ACYP2P14621 99 aa13.58□□□□□ -0.24
CTSA-203ENST00000372459 DMAC1Q96GE9 116 aa13.56□□□□□ -0.24
CTSA-203ENST00000372459 MYCBP2O75592 4640 aa13.55□□□□□ -0.24
CTSA-203ENST00000372459 A6NED7 52 aa13.53□□□□□ -0.24
CTSA-203ENST00000372459 A8MU10 97 aa13.52□□□□□ -0.25
CTSA-203ENST00000372459 C7orf65Q6ZTY9 151 aa13.52□□□□□ -0.25
CTSA-203ENST00000372459 DMBT1Q9UGM3 2413 aaPredicted RBP13.51□□□□□ -0.25
CTSA-203ENST00000372459 LCA10Q71F78 164 aa13.47□□□□□ -0.25
CTSA-203ENST00000372459 CDC42SE1Q9NRR8 79 aa13.45□□□□□ -0.26
CTSA-203ENST00000372459 KRTAP4-5Q9BYR2 181 aa13.43□□□□□ -0.26
CTSA-203ENST00000372459 ATP11AUNQ6ZP68 121 aa13.4□□□□□ -0.26
CTSA-203ENST00000372459 PMAIP1Q13794 54 aa13.38□□□□□ -0.27
CTSA-203ENST00000372459 SPINK7P58062 85 aa13.32□□□□□ -0.28
CTSA-203ENST00000372459 XP32Q5T750 250 aa13.31□□□□□ -0.28
CTSA-203ENST00000372459 RPL37P61927 97 aaKnown RBP13.3□□□□□ -0.28
CTSA-203ENST00000372459 SPTSSBQ8NFR3 76 aa13.3□□□□□ -0.28
CTSA-203ENST00000372459 BIRC6Q9NR09 4857 aa13.19□□□□□ -0.3
CTSA-203ENST00000372459 A6NN06 94 aa13.18□□□□□ -0.3
CTSA-203ENST00000372459 A0A1B0GU69 56 aa13.17□□□□□ -0.3
CTSA-203ENST00000372459 TPRXLQ17RH7 258 aa13.17□□□□□ -0.3
CTSA-203ENST00000372459 ABCA13Q86UQ4 5058 aa13.14□□□□□ -0.31
CTSA-203ENST00000372459 KTN1-AS1Q86SY8 53 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms