RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 IGLV7-46A0A075B6I9 117 aa10.64□□□□□ -0.71
CD40-201ENST00000372276 NDUFS5O43920 106 aa10.63□□□□□ -0.71
CD40-201ENST00000372276 MPLKIPQ8TAP9 179 aa10.63□□□□□ -0.71
CD40-201ENST00000372276 DNAH8Q96JB1 4490 aa10.63□□□□□ -0.71
CD40-201ENST00000372276 RYR3Q15413 4870 aa10.62□□□□□ -0.71
CD40-201ENST00000372276 RYR2Q92736 4967 aa10.62□□□□□ -0.71
CD40-201ENST00000372276 PRR4Q16378 134 aa10.59□□□□□ -0.71
CD40-201ENST00000372276 PRO0628Q9UI54 55 aa10.59□□□□□ -0.71
CD40-201ENST00000372276 C1orf195Q5TG92 126 aa10.58□□□□□ -0.72
CD40-201ENST00000372276 HYDINQ4G0P3 5121 aa10.58□□□□□ -0.72
CD40-201ENST00000372276 LOC101927531A0A1B0GV80 90 aa10.58□□□□□ -0.72
CD40-201ENST00000372276 KRTAP10-1P60331 282 aa10.57□□□□□ -0.72
CD40-201ENST00000372276 SPINK6Q6UWN8 80 aa10.56□□□□□ -0.72
CD40-201ENST00000372276 LINC00336Q6ZUF6 198 aa10.55□□□□□ -0.72
CD40-201ENST00000372276 LIMD2Q9BT23 127 aa10.55□□□□□ -0.72
CD40-201ENST00000372276 A0A087X002 238 aa10.5□□□□□ -0.73
CD40-201ENST00000372276 LINC00313P59037 77 aa10.5□□□□□ -0.73
CD40-201ENST00000372276 NOTCH2NLQ7Z3S9 236 aa10.5□□□□□ -0.73
CD40-201ENST00000372276 KRTAP13-2Q52LG2 175 aa10.48□□□□□ -0.73
CD40-201ENST00000372276 DNAH5Q8TE73 4624 aa10.48□□□□□ -0.73
CD40-201ENST00000372276 DNAH11Q96DT5 4516 aa10.48□□□□□ -0.73
CD40-201ENST00000372276 PCOTHQ58A44 107 aa10.47□□□□□ -0.73
CD40-201ENST00000372276 FRAS1Q86XX4 4008 aa10.46□□□□□ -0.73
CD40-201ENST00000372276 COA5Q86WW8 74 aa10.46□□□□□ -0.74
CD40-201ENST00000372276 FAM229AH3BQW9 127 aa10.45□□□□□ -0.74
CD40-201ENST00000372276 C4orf48Q5BLP8 95 aa10.45□□□□□ -0.74
CD40-201ENST00000372276 KRTAP13-3Q3SY46 172 aa10.44□□□□□ -0.74
CD40-201ENST00000372276 Q8N9P0 234 aaPredicted RBP10.44□□□□□ -0.74
CD40-201ENST00000372276 KRTAP1-4P0C5Y4 121 aa10.43□□□□□ -0.74
CD40-201ENST00000372276 BRK1Q8WUW1 75 aa10.43□□□□□ -0.74
CD40-201ENST00000372276 SPINK1P00995 79 aa10.4□□□□□ -0.74
CD40-201ENST00000372276 PLA2G1BP04054 148 aaKnown RBP10.38□□□□□ -0.75
CD40-201ENST00000372276 RPS29P62273 56 aaKnown RBP10.37□□□□□ -0.75
CD40-201ENST00000372276 Q5W150 140 aa10.36□□□□□ -0.75
CD40-201ENST00000372276 TYMSOSQ8TAI1 123 aa10.36□□□□□ -0.75
CD40-201ENST00000372276 SPAG11AQ6PDA7 123 aa10.35□□□□□ -0.75
CD40-201ENST00000372276 PKD1P98161 4303 aa10.35□□□□□ -0.75
CD40-201ENST00000372276 PSPHP1O15172 72 aa10.34□□□□□ -0.75
CD40-201ENST00000372276 A8MUN3 132 aa10.31□□□□□ -0.76
CD40-201ENST00000372276 ACYP2P14621 99 aa10.31□□□□□ -0.76
CD40-201ENST00000372276 FAT2Q9NYQ8 4349 aa10.31□□□□□ -0.76
CD40-201ENST00000372276 HRES1P13985 223 aa10.29□□□□□ -0.76
CD40-201ENST00000372276 KRTAP16-1A8MUX0 517 aa10.29□□□□□ -0.76
CD40-201ENST00000372276 Q5VV11 94 aa10.28□□□□□ -0.76
CD40-201ENST00000372276 LINC01558Q9Y6Z2 57 aa10.28□□□□□ -0.76
CD40-201ENST00000372276 IGKV2-30P06310 120 aa10.27□□□□□ -0.77
CD40-201ENST00000372276 PRR15LQ9BU68 103 aa10.26□□□□□ -0.77
CD40-201ENST00000372276 LRP1BQ9NZR2 4599 aa10.26□□□□□ -0.77
CD40-201ENST00000372276 A0A1B0GVY2 172 aa10.25□□□□□ -0.77
CD40-201ENST00000372276 Q75L30 129 aa10.25□□□□□ -0.77
CD40-201ENST00000372276 EPPK1P58107 5090 aaKnown RBP10.24□□□□□ -0.77
CD40-201ENST00000372276 LINC00304Q8N9R0 145 aa10.24□□□□□ -0.77
CD40-201ENST00000372276 DMAC1Q96GE9 116 aa10.23□□□□□ -0.77
CD40-201ENST00000372276 CHKB-CPT1BH3BT56 60 aa10.22□□□□□ -0.77
CD40-201ENST00000372276 VPS13BQ7Z7G8 4022 aa10.17□□□□□ -0.78
CD40-201ENST00000372276 PRR26Q8N8Z3 221 aa10.15□□□□□ -0.78
CD40-201ENST00000372276 PKHD1P08F94 4074 aa10.14□□□□□ -0.79
CD40-201ENST00000372276 A6NED7 52 aa10.1□□□□□ -0.79
CD40-201ENST00000372276 RETNLBQ9BQ08 111 aa10.1□□□□□ -0.79
CD40-201ENST00000372276 BIRC6Q9NR09 4857 aa10.09□□□□□ -0.79
CD40-201ENST00000372276 IGKV2D-30A0A075B6S6 120 aa10.06□□□□□ -0.8
CD40-201ENST00000372276 C7orf65Q6ZTY9 151 aa10.05□□□□□ -0.8
CD40-201ENST00000372276 DYNC1H1Q14204 4646 aaKnown RBP10.05□□□□□ -0.8
CD40-201ENST00000372276 CDC42SE1Q9NRR8 79 aa10.04□□□□□ -0.8
CD40-201ENST00000372276 SMR3BP02814 79 aaPredicted RBP10.03□□□□□ -0.8
CD40-201ENST00000372276 ATP11AUNQ6ZP68 121 aa10.03□□□□□ -0.8
CD40-201ENST00000372276 KRTAP10-4P60372 401 aaPredicted RBP10.01□□□□□ -0.81
CD40-201ENST00000372276 A8MUU9 505 aa9.97□□□□□ -0.81
CD40-201ENST00000372276 C20orf166-AS1Q96NR2 134 aa9.97□□□□□ -0.81
CD40-201ENST00000372276 LCA10Q71F78 164 aa9.96□□□□□ -0.82
CD40-201ENST00000372276 KIAA1109Q2LD37 5005 aa9.92□□□□□ -0.82
CD40-201ENST00000372276 A0A1B0GU69 56 aa9.92□□□□□ -0.82
CD40-201ENST00000372276 PMAIP1Q13794 54 aa9.91□□□□□ -0.82
CD40-201ENST00000372276 SPTSSBQ8NFR3 76 aa9.89□□□□□ -0.83
CD40-201ENST00000372276 APOBP04114 4563 aaKnown RBP9.89□□□□□ -0.83
CD40-201ENST00000372276 SPINK7P58062 85 aa9.87□□□□□ -0.83
CD40-201ENST00000372276 PKHD1L1Q86WI1 4243 aa9.87□□□□□ -0.83
CD40-201ENST00000372276 RYR1P21817 5038 aa9.86□□□□□ -0.83
CD40-201ENST00000372276 HSPG2P98160 4391 aa9.84□□□□□ -0.83
CD40-201ENST00000372276 HERC2O95714 4834 aa9.83□□□□□ -0.84
CD40-201ENST00000372276 A8MU10 97 aa9.82□□□□□ -0.84
CD40-201ENST00000372276 C9orf92A6NGG3 77 aa9.82□□□□□ -0.84
CD40-201ENST00000372276 UQCR11O14957 56 aa9.77□□□□□ -0.85
CD40-201ENST00000372276 SEC61GP60059 68 aa9.76□□□□□ -0.85
CD40-201ENST00000372276 Q8N1X5 172 aa9.76□□□□□ -0.85
CD40-201ENST00000372276 KRTAP17-1Q9BYP8 105 aa9.76□□□□□ -0.85
CD40-201ENST00000372276 SPATA8Q6RVD6 105 aa9.74□□□□□ -0.85
CD40-201ENST00000372276 A6NN06 94 aa9.74□□□□□ -0.85
CD40-201ENST00000372276 KRTAP10-8P60410 259 aa9.73□□□□□ -0.85
CD40-201ENST00000372276 FAT1Q14517 4588 aa9.71□□□□□ -0.85
CD40-201ENST00000372276 KTN1-AS1Q86SY8 53 aa9.71□□□□□ -0.86
CD40-201ENST00000372276 MIR22HGQ0VDD5 57 aa9.67□□□□□ -0.86
CD40-201ENST00000372276 KRTAP4-5Q9BYR2 181 aa9.67□□□□□ -0.86
CD40-201ENST00000372276 Q5VSD8 79 aa9.67□□□□□ -0.86
CD40-201ENST00000372276 FLG2Q5D862 2391 aaPredicted RBP9.65□□□□□ -0.87
CD40-201ENST00000372276 COX6B2Q6YFQ2 88 aa9.61□□□□□ -0.87
CD40-201ENST00000372276 KRTAP3-1Q9BYR8 98 aa9.57□□□□□ -0.88
CD40-201ENST00000372276 ABCA13Q86UQ4 5058 aa9.57□□□□□ -0.88
CD40-201ENST00000372276 RPL37P61927 97 aaKnown RBP9.55□□□□□ -0.88
CD40-201ENST00000372276 PCLOQ9Y6V0 5065 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms