RNA–Protein interactions for RNA: ENST00000371941.3

PREX1-201, Transcript of phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PREX1, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREX1-201ENST00000371941 NOTCH2NLQ7Z3S9 236 aa8.07□□□□□ -1.12
PREX1-201ENST00000371941 KRTAP4-16G5E9R7 235 aaPredicted RBP8.07□□□□□ -1.12
PREX1-201ENST00000371941 KRTAP7-1Q8IUC3 87 aa8.05□□□□□ -1.12
PREX1-201ENST00000371941 STAB2Q8WWQ8 2551 aa8.02□□□□□ -1.13
PREX1-201ENST00000371941 Q75L30 129 aa8.02□□□□□ -1.13
PREX1-201ENST00000371941 LCA10Q71F78 164 aa8.01□□□□□ -1.13
PREX1-201ENST00000371941 SPRR1BP22528 89 aa7.98□□□□□ -1.13
PREX1-201ENST00000371941 ZCCHC13Q8WW36 166 aaKnown RBP7.97□□□□□ -1.13
PREX1-201ENST00000371941 VPS13CQ709C8 3753 aa7.97□□□□□ -1.13
PREX1-201ENST00000371941 RBM12B-AS1Q9P1G2 102 aa7.97□□□□□ -1.13
PREX1-201ENST00000371941 MXRA5Q9NR99 2828 aa7.97□□□□□ -1.13
PREX1-201ENST00000371941 A0A1B0GU33 70 aa7.96□□□□□ -1.13
PREX1-201ENST00000371941 LINC01558Q9Y6Z2 57 aa7.95□□□□□ -1.14
PREX1-201ENST00000371941 NIPBLQ6KC79 2804 aaeCLIP7.94□□□□□ -1.14
PREX1-201ENST00000371941 Q6ZSA8 131 aa7.91□□□□□ -1.14
PREX1-201ENST00000371941 KRTAP29-1A8MX34 341 aaPredicted RBP7.89□□□□□ -1.15
PREX1-201ENST00000371941 CSAG1Q6PB30 78 aa7.89□□□□□ -1.15
PREX1-201ENST00000371941 A8MU10 97 aa7.88□□□□□ -1.15
PREX1-201ENST00000371941 LINC00483Q53H64 154 aa7.87□□□□□ -1.15
PREX1-201ENST00000371941 KMT2BQ9UMN6 2715 aaPredicted RBP7.85□□□□□ -1.15
PREX1-201ENST00000371941 SPATA8Q6RVD6 105 aa7.83□□□□□ -1.16
PREX1-201ENST00000371941 S4R3F8 94 aa7.83□□□□□ -1.16
PREX1-201ENST00000371941 Q5VSD8 79 aa7.82□□□□□ -1.16
PREX1-201ENST00000371941 DMBT1Q9UGM3 2413 aaPredicted RBP7.82□□□□□ -1.16
PREX1-201ENST00000371941 Q6ZR54 194 aa7.8□□□□□ -1.16
PREX1-201ENST00000371941 Q6ZRN7 208 aaPredicted RBP7.8□□□□□ -1.16
PREX1-201ENST00000371941 FLG2Q5D862 2391 aaPredicted RBP7.79□□□□□ -1.16
PREX1-201ENST00000371941 M0R2T5 61 aa7.78□□□□□ -1.16
PREX1-201ENST00000371941 DMAC1Q96GE9 116 aa7.75□□□□□ -1.17
PREX1-201ENST00000371941 CAMK2N1Q7Z7J9 78 aa7.71□□□□□ -1.18
PREX1-201ENST00000371941 KRTAP13-2Q52LG2 175 aa7.7□□□□□ -1.18
PREX1-201ENST00000371941 A0A0A0MQY5 61 aa7.68□□□□□ -1.18
PREX1-201ENST00000371941 TENM4Q6N022 2769 aa7.68□□□□□ -1.18
PREX1-201ENST00000371941 ADM2Q7Z4H4 148 aa7.67□□□□□ -1.18
PREX1-201ENST00000371941 LCE6AA0A183 80 aa7.67□□□□□ -1.18
PREX1-201ENST00000371941 H1FX-AS1Q4G0G2 97 aa7.65□□□□□ -1.19
PREX1-201ENST00000371941 KRTAP13-1Q8IUC0 172 aa7.65□□□□□ -1.19
PREX1-201ENST00000371941 LUZP6Q538Z0 58 aa7.64□□□□□ -1.19
PREX1-201ENST00000371941 TRRAPQ9Y4A5 3859 aa7.64□□□□□ -1.19
PREX1-201ENST00000371941 R4GN34 69 aa7.6□□□□□ -1.19
PREX1-201ENST00000371941 TENM3Q9P273 2699 aa7.6□□□□□ -1.19
PREX1-201ENST00000371941 FBN1P35555 2871 aaKnown RBP7.58□□□□□ -1.2
PREX1-201ENST00000371941 M0QZ58 72 aa7.56□□□□□ -1.2
PREX1-201ENST00000371941 RPL37P61927 97 aaKnown RBP7.54□□□□□ -1.2
PREX1-201ENST00000371941 TENM1Q9UKZ4 2725 aa7.54□□□□□ -1.2
PREX1-201ENST00000371941 ROMO1P60602 79 aa7.52□□□□□ -1.21
PREX1-201ENST00000371941 ANK3Q12955 4377 aaKnown RBP7.52□□□□□ -1.21
PREX1-201ENST00000371941 PKD1L1Q8TDX9 2849 aa7.51□□□□□ -1.21
PREX1-201ENST00000371941 PDZD2O15018 2839 aa7.51□□□□□ -1.21
PREX1-201ENST00000371941 VWFP04275 2813 aa7.5□□□□□ -1.21
PREX1-201ENST00000371941 ZNF469Q96JG9 3925 aaPredicted RBP7.5□□□□□ -1.21
PREX1-201ENST00000371941 A6NN06 94 aa7.5□□□□□ -1.21
PREX1-201ENST00000371941 CSMD3Q7Z407 3707 aa7.46□□□□□ -1.21
PREX1-201ENST00000371941 SEC61BP60468 96 aaKnown RBP7.45□□□□□ -1.22
PREX1-201ENST00000371941 TENM2Q9NT68 2774 aa7.43□□□□□ -1.22
PREX1-201ENST00000371941 ASB16-AS1Q495Z4 193 aa7.43□□□□□ -1.22
PREX1-201ENST00000371941 OTOGQ6ZRI0 2925 aa7.39□□□□□ -1.23
PREX1-201ENST00000371941 AKAP9Q99996 3911 aa7.35□□□□□ -1.23
PREX1-201ENST00000371941 TGP01266 2768 aa7.35□□□□□ -1.23
PREX1-201ENST00000371941 KRTAP16-1A8MUX0 517 aa7.33□□□□□ -1.24
PREX1-201ENST00000371941 KRTAP1-4P0C5Y4 121 aa7.32□□□□□ -1.24
PREX1-201ENST00000371941 A8MUU9 505 aa7.31□□□□□ -1.24
PREX1-201ENST00000371941 KRTAP25-1Q3LHN0 102 aa7.3□□□□□ -1.24
PREX1-201ENST00000371941 RPS29P62273 56 aaKnown RBP7.23□□□□□ -1.25
PREX1-201ENST00000371941 C10orf95Q9H7T3 257 aa7.23□□□□□ -1.25
PREX1-201ENST00000371941 NDUFAF8A1L188 74 aa7.21□□□□□ -1.26
PREX1-201ENST00000371941 C20orf166-AS1Q96NR2 134 aa7.18□□□□□ -1.26
PREX1-201ENST00000371941 A0A1B0GVY2 172 aa7.17□□□□□ -1.26
PREX1-201ENST00000371941 PLAC4Q8WY50 150 aa7.17□□□□□ -1.26
PREX1-201ENST00000371941 H0YAA0 97 aa7.16□□□□□ -1.26
PREX1-201ENST00000371941 XP32Q5T750 250 aa7.12□□□□□ -1.27
PREX1-201ENST00000371941 FBN3Q75N90 2809 aa7.11□□□□□ -1.27
PREX1-201ENST00000371941 SRRM2Q9UQ35 2752 aaKnown RBP7.1□□□□□ -1.27
PREX1-201ENST00000371941 HUWE1Q7Z6Z7 4374 aaKnown RBP7.06□□□□□ -1.28
PREX1-201ENST00000371941 P0C880 135 aa7.01□□□□□ -1.29
PREX1-201ENST00000371941 MEGF8Q7Z7M0 2845 aa6.97□□□□□ -1.29
PREX1-201ENST00000371941 KRTAP13-3Q3SY46 172 aa6.95□□□□□ -1.3
PREX1-201ENST00000371941 COL7A1Q02388 2944 aa6.94□□□□□ -1.3
PREX1-201ENST00000371941 KRTAP10-8P60410 259 aa6.87□□□□□ -1.31
PREX1-201ENST00000371941 TNP1P09430 55 aa6.83□□□□□ -1.32
PREX1-201ENST00000371941 KRTAP21-3Q3LHN1 58 aa6.8□□□□□ -1.32
PREX1-201ENST00000371941 DNAH10Q8IVF4 4471 aa6.8□□□□□ -1.32
PREX1-201ENST00000371941 KRTAP12-2P59991 146 aa6.78□□□□□ -1.32
PREX1-201ENST00000371941 KRTAP3-1Q9BYR8 98 aa6.76□□□□□ -1.33
PREX1-201ENST00000371941 TPRXLQ17RH7 258 aa6.74□□□□□ -1.33
PREX1-201ENST00000371941 KRTAP10-10P60014 251 aa6.68□□□□□ -1.34
PREX1-201ENST00000371941 DNAH9Q9NYC9 4486 aa6.63□□□□□ -1.35
PREX1-201ENST00000371941 KRTAP13-4Q3LI77 160 aa6.62□□□□□ -1.35
PREX1-201ENST00000371941 LYSTQ99698 3801 aa6.59□□□□□ -1.35
PREX1-201ENST00000371941 FRAS1Q86XX4 4008 aa6.58□□□□□ -1.36
PREX1-201ENST00000371941 DNAH1Q9P2D7 4330 aa6.57□□□□□ -1.36
PREX1-201ENST00000371941 KRTAP12-1P59990 96 aa6.55□□□□□ -1.36
PREX1-201ENST00000371941 ANK2Q01484 3957 aa6.53□□□□□ -1.36
PREX1-201ENST00000371941 PLECQ15149 4684 aaKnown RBP6.51□□□□□ -1.37
PREX1-201ENST00000371941 KMT2AQ03164 3969 aa6.5□□□□□ -1.37
PREX1-201ENST00000371941 PP632Q6XCG6 107 aa6.46□□□□□ -1.37
PREX1-201ENST00000371941 KRTAP10-6P60371 365 aaPredicted RBP6.46□□□□□ -1.37
PREX1-201ENST00000371941 CMYA5Q8N3K9 4069 aa6.43□□□□□ -1.38
PREX1-201ENST00000371941 KRTAP4-5Q9BYR2 181 aa6.4□□□□□ -1.39
PREX1-201ENST00000371941 DNAH11Q96DT5 4516 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms