RNA–Protein interactions for RNA: ENST00000371509.8

SCP2-201, Transcript of sterol carrier protein 2, humanhuman

TSL 1 (best) BASIC

Gene SCP2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCP2-201ENST00000371509 FAM229BQ4G0N7 80 aa9.68□□□□□ -0.86
SCP2-201ENST00000371509 NDUFC1O43677 76 aa9.67□□□□□ -0.86
SCP2-201ENST00000371509 CYSTM1Q9H1C7 97 aa9.66□□□□□ -0.86
SCP2-201ENST00000371509 FAT3Q8TDW7 4589 aa9.66□□□□□ -0.86
SCP2-201ENST00000371509 TMEM254Q8TBM7 123 aa9.65□□□□□ -0.86
SCP2-201ENST00000371509 CASC2Q6XLA1 102 aa9.63□□□□□ -0.87
SCP2-201ENST00000371509 WFDC13Q8IUB5 93 aa9.62□□□□□ -0.87
SCP2-201ENST00000371509 TYMSOSQ8TAI1 123 aa9.62□□□□□ -0.87
SCP2-201ENST00000371509 KRTAP29-1A8MX34 341 aaPredicted RBP9.61□□□□□ -0.87
SCP2-201ENST00000371509 PCLOQ9Y6V0 5065 aa9.61□□□□□ -0.87
SCP2-201ENST00000371509 C5orf47Q569G3 176 aa9.6□□□□□ -0.87
SCP2-201ENST00000371509 SNURFQ9Y675 71 aa9.6□□□□□ -0.87
SCP2-201ENST00000371509 KRTAP10-8P60410 259 aa9.58□□□□□ -0.88
SCP2-201ENST00000371509 TNXBP22105 4242 aa9.57□□□□□ -0.88
SCP2-201ENST00000371509 A0A0U1RQV1 116 aa9.57□□□□□ -0.88
SCP2-201ENST00000371509 H7BZZ5 65 aa9.57□□□□□ -0.88
SCP2-201ENST00000371509 OXTP01178 125 aa9.57□□□□□ -0.88
SCP2-201ENST00000371509 MT1HL1P0DM35 61 aa9.57□□□□□ -0.88
SCP2-201ENST00000371509 MMP24-AS1A0A0U1RRL7 71 aa9.56□□□□□ -0.88
SCP2-201ENST00000371509 ASB16-AS1Q495Z4 193 aa9.56□□□□□ -0.88
SCP2-201ENST00000371509 A0A1B0GVX0 72 aa9.55□□□□□ -0.88
SCP2-201ENST00000371509 hDV103S1A0JD37 113 aa9.55□□□□□ -0.88
SCP2-201ENST00000371509 FAM236DA0A1B0GTK5 79 aa9.53□□□□□ -0.88
SCP2-201ENST00000371509 FAM236CP0DP71 79 aa9.53□□□□□ -0.88
SCP2-201ENST00000371509 MP68P56378 58 aa9.53□□□□□ -0.88
SCP2-201ENST00000371509 ATP5EP56381 51 aaPredicted RBP9.52□□□□□ -0.89
SCP2-201ENST00000371509 Q5XG85 94 aa9.52□□□□□ -0.89
SCP2-201ENST00000371509 C8orf17Q9NRJ1 99 aa9.52□□□□□ -0.89
SCP2-201ENST00000371509 IGHV6-1A0A0B4J1U7 121 aa9.51□□□□□ -0.89
SCP2-201ENST00000371509 RPS28P62857 69 aaKnown RBP9.51□□□□□ -0.89
SCP2-201ENST00000371509 LINC00304Q8N9R0 145 aa9.51□□□□□ -0.89
SCP2-201ENST00000371509 LIMD2Q9BT23 127 aa9.5□□□□□ -0.89
SCP2-201ENST00000371509 H3BPC8 53 aa9.49□□□□□ -0.89
SCP2-201ENST00000371509 J3QL48 77 aa9.49□□□□□ -0.89
SCP2-201ENST00000371509 TP53AIP1Q9HCN2 124 aa9.49□□□□□ -0.89
SCP2-201ENST00000371509 C4orf48Q5BLP8 95 aa9.48□□□□□ -0.89
SCP2-201ENST00000371509 C8orf87E5RJ46 101 aa9.45□□□□□ -0.9
SCP2-201ENST00000371509 ZCCHC13Q8WW36 166 aaKnown RBP9.44□□□□□ -0.9
SCP2-201ENST00000371509 H0Y9P7 68 aa9.43□□□□□ -0.9
SCP2-201ENST00000371509 MRPL34Q9BQ48 92 aaKnown RBP9.43□□□□□ -0.9
SCP2-201ENST00000371509 C1orf195Q5TG92 126 aa9.42□□□□□ -0.9
SCP2-201ENST00000371509 SPINK1P00995 79 aa9.42□□□□□ -0.9
SCP2-201ENST00000371509 SPAG11AQ6PDA7 123 aa9.42□□□□□ -0.9
SCP2-201ENST00000371509 NOTCH2NLQ7Z3S9 236 aa9.41□□□□□ -0.9
SCP2-201ENST00000371509 TRAV22A0A0B4J277 110 aa9.4□□□□□ -0.9
SCP2-201ENST00000371509 SERP1Q9Y6X1 66 aa9.4□□□□□ -0.91
SCP2-201ENST00000371509 LINC00208Q96KT6 92 aa9.39□□□□□ -0.91
SCP2-201ENST00000371509 DMBT1Q9UGM3 2413 aaPredicted RBP9.39□□□□□ -0.91
SCP2-201ENST00000371509 NDUFS5O43920 106 aa9.38□□□□□ -0.91
SCP2-201ENST00000371509 RPS29P62273 56 aaKnown RBP9.37□□□□□ -0.91
SCP2-201ENST00000371509 C1orf64Q8NEQ6 169 aa9.34□□□□□ -0.91
SCP2-201ENST00000371509 LINC00313P59037 77 aa9.34□□□□□ -0.91
SCP2-201ENST00000371509 RETNLBQ9BQ08 111 aa9.34□□□□□ -0.91
SCP2-201ENST00000371509 SPANXA2-OT1Q8N9U9 137 aa9.27□□□□□ -0.93
SCP2-201ENST00000371509 CYP4F30PQ9H0H9 118 aa9.25□□□□□ -0.93
SCP2-201ENST00000371509 KRTAP16-1A8MUX0 517 aa9.24□□□□□ -0.93
SCP2-201ENST00000371509 HERC1Q15751 4861 aa9.24□□□□□ -0.93
SCP2-201ENST00000371509 Q8N9P0 234 aaPredicted RBP9.23□□□□□ -0.93
SCP2-201ENST00000371509 LOC101927531A0A1B0GV80 90 aa9.22□□□□□ -0.93
SCP2-201ENST00000371509 KRTAP13-3Q3SY46 172 aa9.22□□□□□ -0.93
SCP2-201ENST00000371509 SMIM26A0A096LP01 95 aa9.2□□□□□ -0.94
SCP2-201ENST00000371509 PRR4Q16378 134 aa9.19□□□□□ -0.94
SCP2-201ENST00000371509 Q5W150 140 aa9.17□□□□□ -0.94
SCP2-201ENST00000371509 IGLV7-46A0A075B6I9 117 aa9.15□□□□□ -0.95
SCP2-201ENST00000371509 PCOTHQ58A44 107 aa9.13□□□□□ -0.95
SCP2-201ENST00000371509 FP248Q71RG6 208 aaPredicted RBP9.13□□□□□ -0.95
SCP2-201ENST00000371509 LPAP08519 4548 aa9.08□□□□□ -0.96
SCP2-201ENST00000371509 C9orf92A6NGG3 77 aa9.06□□□□□ -0.96
SCP2-201ENST00000371509 HMCN2Q8NDA2 5059 aa9.04□□□□□ -0.96
SCP2-201ENST00000371509 IGKV2-30P06310 120 aa9.03□□□□□ -0.96
SCP2-201ENST00000371509 TPRXLQ17RH7 258 aa9□□□□□ -0.97
SCP2-201ENST00000371509 C20orf166-AS1Q96NR2 134 aa8.98□□□□□ -0.97
SCP2-201ENST00000371509 A8MUU9 505 aa8.97□□□□□ -0.97
SCP2-201ENST00000371509 COA5Q86WW8 74 aa8.97□□□□□ -0.97
SCP2-201ENST00000371509 C4orf26Q17RF5 130 aa8.96□□□□□ -0.97
SCP2-201ENST00000371509 V9GYY9 64 aa8.96□□□□□ -0.98
SCP2-201ENST00000371509 MPLKIPQ8TAP9 179 aa8.95□□□□□ -0.98
SCP2-201ENST00000371509 HRES1P13985 223 aa8.94□□□□□ -0.98
SCP2-201ENST00000371509 Q1T7F1 81 aa8.94□□□□□ -0.98
SCP2-201ENST00000371509 IGKV2D-30A0A075B6S6 120 aa8.93□□□□□ -0.98
SCP2-201ENST00000371509 LRP2P98164 4655 aa8.93□□□□□ -0.98
SCP2-201ENST00000371509 ACYP2P14621 99 aa8.92□□□□□ -0.98
SCP2-201ENST00000371509 XP32Q5T750 250 aa8.92□□□□□ -0.98
SCP2-201ENST00000371509 C7orf65Q6ZTY9 151 aa8.91□□□□□ -0.98
SCP2-201ENST00000371509 DMAC1Q96GE9 116 aa8.88□□□□□ -0.99
SCP2-201ENST00000371509 Q75L30 129 aa8.85□□□□□ -0.99
SCP2-201ENST00000371509 CHKB-CPT1BH3BT56 60 aa8.8□□□□□ -1
SCP2-201ENST00000371509 RPL37P61927 97 aaKnown RBP8.8□□□□□ -1
SCP2-201ENST00000371509 A8MUN3 132 aa8.77□□□□□ -1.01
SCP2-201ENST00000371509 ATP11AUNQ6ZP68 121 aa8.74□□□□□ -1.01
SCP2-201ENST00000371509 PSPHP1O15172 72 aa8.72□□□□□ -1.01
SCP2-201ENST00000371509 UBR4Q5T4S7 5183 aa8.72□□□□□ -1.01
SCP2-201ENST00000371509 LINC01558Q9Y6Z2 57 aa8.71□□□□□ -1.01
SCP2-201ENST00000371509 SPINK7P58062 85 aa8.7□□□□□ -1.02
SCP2-201ENST00000371509 SEC61BP60468 96 aaKnown RBP8.7□□□□□ -1.02
SCP2-201ENST00000371509 PRR15LQ9BU68 103 aa8.69□□□□□ -1.02
SCP2-201ENST00000371509 MUC17Q685J3 4493 aa8.66□□□□□ -1.02
SCP2-201ENST00000371509 Q5VV11 94 aa8.64□□□□□ -1.03
SCP2-201ENST00000371509 BRK1Q8WUW1 75 aa8.62□□□□□ -1.03
SCP2-201ENST00000371509 KRTAP4-1Q9BYQ7 146 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 138 ms