RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 A0A1B0GW54 56 aa5.26□□□□□ -1.57
TPM3-213ENST00000368545 SMR3BP02814 79 aaPredicted RBP5.26□□□□□ -1.57
TPM3-213ENST00000368545 SPRR4Q96PI1 79 aa5.26□□□□□ -1.57
TPM3-213ENST00000368545 LINC00846Q9NV44 126 aa5.26□□□□□ -1.57
TPM3-213ENST00000368545 HMCN2Q8NDA2 5059 aa5.25□□□□□ -1.57
TPM3-213ENST00000368545 LINC00483Q53H64 154 aa5.25□□□□□ -1.57
TPM3-213ENST00000368545 LINC00643Q86TS7 51 aa5.25□□□□□ -1.57
TPM3-213ENST00000368545 UBL5Q9BZL1 73 aa5.25□□□□□ -1.57
TPM3-213ENST00000368545 APOBP04114 4563 aaKnown RBP5.25□□□□□ -1.57
TPM3-213ENST00000368545 MYCBP2O75592 4640 aa5.25□□□□□ -1.57
TPM3-213ENST00000368545 Q6JHZ5 121 aa5.24□□□□□ -1.57
TPM3-213ENST00000368545 HAMPP81172 84 aa5.23□□□□□ -1.57
TPM3-213ENST00000368545 RPL37AP61513 92 aaKnown RBP5.22□□□□□ -1.57
TPM3-213ENST00000368545 ATP5EP2Q5VTU8 51 aa5.22□□□□□ -1.57
TPM3-213ENST00000368545 FAM236AA0A1B0GUQ0 79 aa5.21□□□□□ -1.57
TPM3-213ENST00000368545 FAM236BA0A1B0GV22 79 aa5.21□□□□□ -1.57
TPM3-213ENST00000368545 IGFL1Q6UW32 110 aa5.21□□□□□ -1.57
TPM3-213ENST00000368545 A0A1W2PNM2 257 aa5.21□□□□□ -1.58
TPM3-213ENST00000368545 SRRM2Q9UQ35 2752 aaKnown RBP5.2□□□□□ -1.58
TPM3-213ENST00000368545 TRBV7-7A0A0K0K1E9 115 aa5.2□□□□□ -1.58
TPM3-213ENST00000368545 CRYGAP11844 174 aa5.2□□□□□ -1.58
TPM3-213ENST00000368545 Q6Q795 121 aa5.2□□□□□ -1.58
TPM3-213ENST00000368545 IMUPQ9GZP8 106 aa5.2□□□□□ -1.58
TPM3-213ENST00000368545 CD164Q04900 197 aa5.19□□□□□ -1.58
TPM3-213ENST00000368545 C9orf153Q5TBE3 101 aa5.19□□□□□ -1.58
TPM3-213ENST00000368545 KRTAP16-1A8MUX0 517 aa5.18□□□□□ -1.58
TPM3-213ENST00000368545 FLG2Q5D862 2391 aaPredicted RBP5.17□□□□□ -1.58
TPM3-213ENST00000368545 NREPQ16612 68 aa5.17□□□□□ -1.58
TPM3-213ENST00000368545 MOBPQ13875 183 aa5.16□□□□□ -1.58
TPM3-213ENST00000368545 FAM229BQ4G0N7 80 aa5.16□□□□□ -1.58
TPM3-213ENST00000368545 TYMSOSQ8TAI1 123 aa5.16□□□□□ -1.58
TPM3-213ENST00000368545 IGKV3D-7A0A0C4DH55 119 aa5.15□□□□□ -1.59
TPM3-213ENST00000368545 SPINK6Q6UWN8 80 aa5.15□□□□□ -1.59
TPM3-213ENST00000368545 ANAPC11Q9NYG5 84 aa5.14□□□□□ -1.59
TPM3-213ENST00000368545 A0A087WSZ3 146 aa5.14□□□□□ -1.59
TPM3-213ENST00000368545 A0A0G2JQZ4 141 aa5.14□□□□□ -1.59
TPM3-213ENST00000368545 SSBP3-AS1Q7Z2R9 100 aa5.13□□□□□ -1.59
TPM3-213ENST00000368545 BPY2O14599 106 aa5.12□□□□□ -1.59
TPM3-213ENST00000368545 KRTAP10-4P60372 401 aaPredicted RBP5.12□□□□□ -1.59
TPM3-213ENST00000368545 PMAIP1Q13794 54 aa5.12□□□□□ -1.59
TPM3-213ENST00000368545 MT1HL1P0DM35 61 aa5.11□□□□□ -1.59
TPM3-213ENST00000368545 HIST1H4AP62805 103 aaKnown RBP5.11□□□□□ -1.59
TPM3-213ENST00000368545 SMIM26A0A096LP01 95 aa5.11□□□□□ -1.59
TPM3-213ENST00000368545 KRTAP1-4P0C5Y4 121 aa5.11□□□□□ -1.59
TPM3-213ENST00000368545 CRCT1Q9UGL9 99 aa5.11□□□□□ -1.59
TPM3-213ENST00000368545 PKHD1L1Q86WI1 4243 aa5.09□□□□□ -1.6
TPM3-213ENST00000368545 KRTAP13-2Q52LG2 175 aa5.08□□□□□ -1.6
TPM3-213ENST00000368545 RNF213Q63HN8 5207 aa5.07□□□□□ -1.6
TPM3-213ENST00000368545 A0A087WVE0 104 aa5.07□□□□□ -1.6
TPM3-213ENST00000368545 UQCRQO14949 82 aa5.06□□□□□ -1.6
TPM3-213ENST00000368545 IGKV4-1P06312 121 aa5.06□□□□□ -1.6
TPM3-213ENST00000368545 LINC00472Q9H8W2 130 aa5.06□□□□□ -1.6
TPM3-213ENST00000368545 ATOX1O00244 68 aa5.05□□□□□ -1.6
TPM3-213ENST00000368545 DSCR10P59022 87 aa5.05□□□□□ -1.6
TPM3-213ENST00000368545 TMEM258P61165 79 aa5.03□□□□□ -1.6
TPM3-213ENST00000368545 ASB16-AS1Q495Z4 193 aa5.03□□□□□ -1.6
TPM3-213ENST00000368545 Q8N9L7 120 aa5.03□□□□□ -1.6
TPM3-213ENST00000368545 FAT1Q14517 4588 aa5.03□□□□□ -1.6
TPM3-213ENST00000368545 A8MWP4 228 aa5.03□□□□□ -1.6
TPM3-213ENST00000368545 K7EQZ3 153 aa5.03□□□□□ -1.6
TPM3-213ENST00000368545 Q96NJ1 140 aa5.03□□□□□ -1.6
TPM3-213ENST00000368545 LIMD2Q9BT23 127 aa5.03□□□□□ -1.6
TPM3-213ENST00000368545 CYSTM1Q9H1C7 97 aa5.03□□□□□ -1.6
TPM3-213ENST00000368545 DEFB116Q30KQ4 102 aa5.02□□□□□ -1.61
TPM3-213ENST00000368545 NDUFB1O75438 58 aa5.01□□□□□ -1.61
TPM3-213ENST00000368545 SPINK1P00995 79 aa5.01□□□□□ -1.61
TPM3-213ENST00000368545 RPS29P62273 56 aaKnown RBP5□□□□□ -1.61
TPM3-213ENST00000368545 SPAG11AQ6PDA7 123 aa5□□□□□ -1.61
TPM3-213ENST00000368545 CAMK2N1Q7Z7J9 78 aa5□□□□□ -1.61
TPM3-213ENST00000368545 PRR15Q8IV56 129 aa5□□□□□ -1.61
TPM3-213ENST00000368545 BRK1Q8WUW1 75 aa5□□□□□ -1.61
TPM3-213ENST00000368545 LCE1AQ5T7P2 110 aa4.99□□□□□ -1.61
TPM3-213ENST00000368545 LINC00304Q8N9R0 145 aa4.99□□□□□ -1.61
TPM3-213ENST00000368545 RBM12B-AS1Q9P1G2 102 aa4.99□□□□□ -1.61
TPM3-213ENST00000368545 HCG22E2RYF7 251 aa4.99□□□□□ -1.61
TPM3-213ENST00000368545 COX7CP15954 63 aa4.99□□□□□ -1.61
TPM3-213ENST00000368545 PSPHP1O15172 72 aa4.98□□□□□ -1.61
TPM3-213ENST00000368545 NDUFS5O43920 106 aa4.97□□□□□ -1.61
TPM3-213ENST00000368545 SERP2Q8N6R1 65 aa4.97□□□□□ -1.61
TPM3-213ENST00000368545 FAT4Q6V0I7 4981 aa4.97□□□□□ -1.61
TPM3-213ENST00000368545 LCE1DQ5T752 114 aa4.96□□□□□ -1.62
TPM3-213ENST00000368545 FP248Q71RG6 208 aaPredicted RBP4.96□□□□□ -1.62
TPM3-213ENST00000368545 A0A1B0GVX0 72 aa4.96□□□□□ -1.62
TPM3-213ENST00000368545 C8orf87E5RJ46 101 aa4.96□□□□□ -1.62
TPM3-213ENST00000368545 TRAV7A0A075B6U4 112 aa4.95□□□□□ -1.62
TPM3-213ENST00000368545 CASC2Q6XLA1 102 aa4.94□□□□□ -1.62
TPM3-213ENST00000368545 MMP24-AS1A0A0U1RRL7 71 aa4.94□□□□□ -1.62
TPM3-213ENST00000368545 IGHV6-1A0A0B4J1U7 121 aa4.93□□□□□ -1.62
TPM3-213ENST00000368545 KRTAP10-8P60410 259 aa4.93□□□□□ -1.62
TPM3-213ENST00000368545 WFDC13Q8IUB5 93 aa4.93□□□□□ -1.62
TPM3-213ENST00000368545 C8orf17Q9NRJ1 99 aa4.93□□□□□ -1.62
TPM3-213ENST00000368545 hDV103S1A0JD37 113 aa4.92□□□□□ -1.62
TPM3-213ENST00000368545 FAT3Q8TDW7 4589 aa4.91□□□□□ -1.62
TPM3-213ENST00000368545 TMEM254Q8TBM7 123 aa4.9□□□□□ -1.63
TPM3-213ENST00000368545 SERP1Q9Y6X1 66 aa4.89□□□□□ -1.63
TPM3-213ENST00000368545 MRPL34Q9BQ48 92 aaKnown RBP4.88□□□□□ -1.63
TPM3-213ENST00000368545 TNXBP22105 4242 aa4.88□□□□□ -1.63
TPM3-213ENST00000368545 LINC00313P59037 77 aa4.87□□□□□ -1.63
TPM3-213ENST00000368545 TP53AIP1Q9HCN2 124 aa4.87□□□□□ -1.63
TPM3-213ENST00000368545 KRTAP4-8A0A0G2JLE6 195 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms