RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 HRCT1Q6UXD1 115 aa5.85□□□□□ -1.47
TPM3-210ENST00000368530 FAM236AA0A1B0GUQ0 79 aa5.84□□□□□ -1.47
TPM3-210ENST00000368530 FAM236BA0A1B0GV22 79 aa5.84□□□□□ -1.47
TPM3-210ENST00000368530 A0A1B0GW54 56 aa5.84□□□□□ -1.47
TPM3-210ENST00000368530 KRTAP1-4P0C5Y4 121 aa5.84□□□□□ -1.47
TPM3-210ENST00000368530 LCE3BQ5TA77 95 aa5.84□□□□□ -1.47
TPM3-210ENST00000368530 BPY2O14599 106 aa5.84□□□□□ -1.48
TPM3-210ENST00000368530 CXCL6P80162 114 aa5.84□□□□□ -1.48
TPM3-210ENST00000368530 Q8N9L7 120 aa5.83□□□□□ -1.48
TPM3-210ENST00000368530 DEFB116Q30KQ4 102 aa5.81□□□□□ -1.48
TPM3-210ENST00000368530 ANAPC13Q9BS18 74 aa5.8□□□□□ -1.48
TPM3-210ENST00000368530 A0A087X002 238 aa5.79□□□□□ -1.48
TPM3-210ENST00000368530 IGKV4-1P06312 121 aa5.78□□□□□ -1.48
TPM3-210ENST00000368530 KRTAP13-2Q52LG2 175 aa5.77□□□□□ -1.49
TPM3-210ENST00000368530 DSCR10P59022 87 aa5.76□□□□□ -1.49
TPM3-210ENST00000368530 FAM229BQ4G0N7 80 aa5.76□□□□□ -1.49
TPM3-210ENST00000368530 PRR4Q16378 134 aa5.75□□□□□ -1.49
TPM3-210ENST00000368530 K7EQZ3 153 aa5.74□□□□□ -1.49
TPM3-210ENST00000368530 ATOX1O00244 68 aa5.74□□□□□ -1.49
TPM3-210ENST00000368530 SSBP3-AS1Q7Z2R9 100 aa5.74□□□□□ -1.49
TPM3-210ENST00000368530 LINC00472Q9H8W2 130 aa5.74□□□□□ -1.49
TPM3-210ENST00000368530 SS18L2Q9UHA2 77 aa5.73□□□□□ -1.49
TPM3-210ENST00000368530 FAT4Q6V0I7 4981 aa5.72□□□□□ -1.49
TPM3-210ENST00000368530 TYMSOSQ8TAI1 123 aa5.71□□□□□ -1.5
TPM3-210ENST00000368530 Q96NJ1 140 aa5.71□□□□□ -1.5
TPM3-210ENST00000368530 CD164Q04900 197 aa5.7□□□□□ -1.5
TPM3-210ENST00000368530 KRTAP9-9Q9BYP9 154 aa5.7□□□□□ -1.5
TPM3-210ENST00000368530 KRTAP9-4Q9BYQ2 154 aa5.7□□□□□ -1.5
TPM3-210ENST00000368530 CCDC179H3BU77 68 aa5.69□□□□□ -1.5
TPM3-210ENST00000368530 LCE4AQ5TA78 99 aa5.69□□□□□ -1.5
TPM3-210ENST00000368530 A0A0U1RQV1 116 aa5.69□□□□□ -1.5
TPM3-210ENST00000368530 A8MWP4 228 aa5.69□□□□□ -1.5
TPM3-210ENST00000368530 J3KT08 172 aa5.69□□□□□ -1.5
TPM3-210ENST00000368530 WFDC13Q8IUB5 93 aa5.68□□□□□ -1.5
TPM3-210ENST00000368530 HCG22E2RYF7 251 aa5.67□□□□□ -1.5
TPM3-210ENST00000368530 PRR15Q8IV56 129 aa5.67□□□□□ -1.5
TPM3-210ENST00000368530 SERP2Q8N6R1 65 aa5.67□□□□□ -1.5
TPM3-210ENST00000368530 NDUFB1O75438 58 aa5.66□□□□□ -1.5
TPM3-210ENST00000368530 MUC17Q685J3 4493 aa5.66□□□□□ -1.5
TPM3-210ENST00000368530 COX7CP15954 63 aa5.65□□□□□ -1.5
TPM3-210ENST00000368530 KRTAP9-7A8MTY7 169 aa5.64□□□□□ -1.51
TPM3-210ENST00000368530 TRAV7A0A075B6U4 112 aa5.64□□□□□ -1.51
TPM3-210ENST00000368530 IGHV6-1A0A0B4J1U7 121 aa5.64□□□□□ -1.51
TPM3-210ENST00000368530 UQCRQO14949 82 aa5.64□□□□□ -1.51
TPM3-210ENST00000368530 LINC00304Q8N9R0 145 aa5.64□□□□□ -1.51
TPM3-210ENST00000368530 A0A1B0GVX0 72 aa5.63□□□□□ -1.51
TPM3-210ENST00000368530 CASC2Q6XLA1 102 aa5.63□□□□□ -1.51
TPM3-210ENST00000368530 SMIM20Q8N5G0 67 aa5.63□□□□□ -1.51
TPM3-210ENST00000368530 MMP24-AS1A0A0U1RRL7 71 aa5.62□□□□□ -1.51
TPM3-210ENST00000368530 ASB16-AS1Q495Z4 193 aa5.62□□□□□ -1.51
TPM3-210ENST00000368530 RETNLBQ9BQ08 111 aa5.62□□□□□ -1.51
TPM3-210ENST00000368530 LIMD2Q9BT23 127 aa5.62□□□□□ -1.51
TPM3-210ENST00000368530 C1orf195Q5TG92 126 aa5.61□□□□□ -1.51
TPM3-210ENST00000368530 Q5XG85 94 aa5.6□□□□□ -1.51
TPM3-210ENST00000368530 OCR1Q9BZK8 76 aa5.6□□□□□ -1.51
TPM3-210ENST00000368530 C8orf17Q9NRJ1 99 aa5.6□□□□□ -1.51
TPM3-210ENST00000368530 SPINK1P00995 79 aa5.59□□□□□ -1.51
TPM3-210ENST00000368530 TPRXLQ17RH7 258 aa5.59□□□□□ -1.51
TPM3-210ENST00000368530 NOTCH2NLQ7Z3S9 236 aa5.59□□□□□ -1.51
TPM3-210ENST00000368530 KRTAP3-1Q9BYR8 98 aa5.59□□□□□ -1.51
TPM3-210ENST00000368530 hDV103S1A0JD37 113 aa5.58□□□□□ -1.52
TPM3-210ENST00000368530 C20orf197Q8N268 126 aa5.58□□□□□ -1.52
TPM3-210ENST00000368530 SPAG11AQ6PDA7 123 aa5.58□□□□□ -1.52
TPM3-210ENST00000368530 IGLV7-46A0A075B6I9 117 aa5.56□□□□□ -1.52
TPM3-210ENST00000368530 CYSTM1Q9H1C7 97 aa5.56□□□□□ -1.52
TPM3-210ENST00000368530 SNURFQ9Y675 71 aa5.56□□□□□ -1.52
TPM3-210ENST00000368530 NDUFS5O43920 106 aa5.54□□□□□ -1.52
TPM3-210ENST00000368530 KRTAP4-8A0A0G2JLE6 195 aa5.53□□□□□ -1.52
TPM3-210ENST00000368530 C8orf87E5RJ46 101 aa5.53□□□□□ -1.52
TPM3-210ENST00000368530 RPS29P62273 56 aaKnown RBP5.53□□□□□ -1.52
TPM3-210ENST00000368530 TMEM254Q8TBM7 123 aa5.53□□□□□ -1.52
TPM3-210ENST00000368530 MRPL34Q9BQ48 92 aaKnown RBP5.53□□□□□ -1.52
TPM3-210ENST00000368530 LINC00313P59037 77 aa5.52□□□□□ -1.53
TPM3-210ENST00000368530 KRTAP4-1Q9BYQ7 146 aa5.51□□□□□ -1.53
TPM3-210ENST00000368530 KRTAP23-1A1A580 65 aa5.49□□□□□ -1.53
TPM3-210ENST00000368530 H0Y9P7 68 aa5.48□□□□□ -1.53
TPM3-210ENST00000368530 KLKP1Q107X0 134 aa5.48□□□□□ -1.53
TPM3-210ENST00000368530 KRTAP13-3Q3SY46 172 aa5.48□□□□□ -1.53
TPM3-210ENST00000368530 C5orf47Q569G3 176 aa5.48□□□□□ -1.53
TPM3-210ENST00000368530 MP68P56378 58 aa5.48□□□□□ -1.53
TPM3-210ENST00000368530 LCE1DQ5T752 114 aa5.46□□□□□ -1.54
TPM3-210ENST00000368530 FP248Q71RG6 208 aaPredicted RBP5.46□□□□□ -1.54
TPM3-210ENST00000368530 LINC00208Q96KT6 92 aa5.46□□□□□ -1.54
TPM3-210ENST00000368530 TP53AIP1Q9HCN2 124 aa5.46□□□□□ -1.54
TPM3-210ENST00000368530 TRAV22A0A0B4J277 110 aa5.45□□□□□ -1.54
TPM3-210ENST00000368530 KRTAP16-1A8MUX0 517 aa5.45□□□□□ -1.54
TPM3-210ENST00000368530 H7BZZ5 65 aa5.45□□□□□ -1.54
TPM3-210ENST00000368530 C9orf92A6NGG3 77 aa5.44□□□□□ -1.54
TPM3-210ENST00000368530 FSIP2Q5CZC0 6907 aa5.44□□□□□ -1.54
TPM3-210ENST00000368530 ZCCHC13Q8WW36 166 aaKnown RBP5.43□□□□□ -1.54
TPM3-210ENST00000368530 CRCT1Q9UGL9 99 aa5.43□□□□□ -1.54
TPM3-210ENST00000368530 TMEM258P61165 79 aa5.43□□□□□ -1.54
TPM3-210ENST00000368530 C1orf64Q8NEQ6 169 aa5.43□□□□□ -1.54
TPM3-210ENST00000368530 NDUFC1O43677 76 aa5.42□□□□□ -1.54
TPM3-210ENST00000368530 Q5W150 140 aa5.42□□□□□ -1.54
TPM3-210ENST00000368530 Q8N9P0 234 aaPredicted RBP5.41□□□□□ -1.54
TPM3-210ENST00000368530 FAM236DA0A1B0GTK5 79 aa5.39□□□□□ -1.55
TPM3-210ENST00000368530 H3BPC8 53 aa5.39□□□□□ -1.55
TPM3-210ENST00000368530 FAM236CP0DP71 79 aa5.39□□□□□ -1.55
TPM3-210ENST00000368530 KRTAP19-2Q3LHN2 52 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms