RNA–Protein interactions for RNA: ENST00000367975.6

SDHC-202, Transcript of succinate dehydrogenase complex subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHC, Length 13,566 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-202ENST00000367975 Q5VV11 94 aa3.21□□□□□ -1.89
SDHC-202ENST00000367975 SPINK7P58062 85 aa3.21□□□□□ -1.9
SDHC-202ENST00000367975 AKAP9Q99996 3911 aa3.21□□□□□ -1.9
SDHC-202ENST00000367975 ROMO1P60602 79 aa3.21□□□□□ -1.9
SDHC-202ENST00000367975 Q5XG85 94 aa3.21□□□□□ -1.9
SDHC-202ENST00000367975 ASB16-AS1Q495Z4 193 aa3.2□□□□□ -1.9
SDHC-202ENST00000367975 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.2□□□□□ -1.9
SDHC-202ENST00000367975 NBEAL2Q6ZNJ1 2754 aa3.2□□□□□ -1.9
SDHC-202ENST00000367975 Q5W150 140 aa3.2□□□□□ -1.9
SDHC-202ENST00000367975 PLAC8Q9NZF1 115 aa3.19□□□□□ -1.9
SDHC-202ENST00000367975 CASC10Q5T4H9 136 aa3.19□□□□□ -1.9
SDHC-202ENST00000367975 HRNRQ86YZ3 2850 aaPredicted RBP3.19□□□□□ -1.9
SDHC-202ENST00000367975 PRAC1Q96KF2 57 aa3.19□□□□□ -1.9
SDHC-202ENST00000367975 KRTAP10-3P60369 221 aa3.17□□□□□ -1.9
SDHC-202ENST00000367975 LINC00472Q9H8W2 130 aa3.16□□□□□ -1.9
SDHC-202ENST00000367975 M0QZ58 72 aa3.16□□□□□ -1.9
SDHC-202ENST00000367975 SPRR1BP22528 89 aa3.16□□□□□ -1.9
SDHC-202ENST00000367975 RPL37P61927 97 aaKnown RBP3.15□□□□□ -1.9
SDHC-202ENST00000367975 FP248Q71RG6 208 aaPredicted RBP3.15□□□□□ -1.9
SDHC-202ENST00000367975 FBN2P35556 2912 aa3.14□□□□□ -1.91
SDHC-202ENST00000367975 SEC61BP60468 96 aaKnown RBP3.14□□□□□ -1.91
SDHC-202ENST00000367975 H1FX-AS1Q4G0G2 97 aa3.13□□□□□ -1.91
SDHC-202ENST00000367975 SPRR1AP35321 89 aa3.13□□□□□ -1.91
SDHC-202ENST00000367975 KRTAP21-3Q3LHN1 58 aa3.13□□□□□ -1.91
SDHC-202ENST00000367975 ANK2Q01484 3957 aa3.12□□□□□ -1.91
SDHC-202ENST00000367975 SRRM2Q9UQ35 2752 aaKnown RBP3.12□□□□□ -1.91
SDHC-202ENST00000367975 CSMD3Q7Z407 3707 aa3.12□□□□□ -1.91
SDHC-202ENST00000367975 PANO1I0J062 215 aa3.11□□□□□ -1.91
SDHC-202ENST00000367975 KRTAP16-1A8MUX0 517 aa3.11□□□□□ -1.91
SDHC-202ENST00000367975 TENM2Q9NT68 2774 aa3.1□□□□□ -1.91
SDHC-202ENST00000367975 PLAC4Q8WY50 150 aa3.1□□□□□ -1.91
SDHC-202ENST00000367975 Q6ZR54 194 aa3.1□□□□□ -1.91
SDHC-202ENST00000367975 CYSTM1Q9H1C7 97 aa3.1□□□□□ -1.91
SDHC-202ENST00000367975 TGP01266 2768 aa3.1□□□□□ -1.91
SDHC-202ENST00000367975 KRTAP26-1Q6PEX3 210 aa3.09□□□□□ -1.92
SDHC-202ENST00000367975 KRTAP1-1Q07627 177 aa3.08□□□□□ -1.92
SDHC-202ENST00000367975 ADM2Q7Z4H4 148 aa3.08□□□□□ -1.92
SDHC-202ENST00000367975 SPATA8Q6RVD6 105 aa3.08□□□□□ -1.92
SDHC-202ENST00000367975 Q8NDZ9 215 aa3.08□□□□□ -1.92
SDHC-202ENST00000367975 PDZD2O15018 2839 aa3.07□□□□□ -1.92
SDHC-202ENST00000367975 Q5VSD8 79 aa3.07□□□□□ -1.92
SDHC-202ENST00000367975 KRTAP1-3Q8IUG1 177 aa3.06□□□□□ -1.92
SDHC-202ENST00000367975 VWFP04275 2813 aa3.05□□□□□ -1.92
SDHC-202ENST00000367975 OXTP01178 125 aa3.05□□□□□ -1.92
SDHC-202ENST00000367975 KRTAP25-1Q3LHN0 102 aa3.05□□□□□ -1.92
SDHC-202ENST00000367975 RPS29P62273 56 aaKnown RBP3.05□□□□□ -1.92
SDHC-202ENST00000367975 A6NN06 94 aa3.04□□□□□ -1.92
SDHC-202ENST00000367975 KRTAP1-5Q9BYS1 174 aa3.04□□□□□ -1.92
SDHC-202ENST00000367975 PKD1L1Q8TDX9 2849 aa3.03□□□□□ -1.93
SDHC-202ENST00000367975 KRTAP29-1A8MX34 341 aaPredicted RBP3.02□□□□□ -1.93
SDHC-202ENST00000367975 KRTAP4-16G5E9R7 235 aaPredicted RBP3.02□□□□□ -1.93
SDHC-202ENST00000367975 A0A087X002 238 aa3.02□□□□□ -1.93
SDHC-202ENST00000367975 LCE6AA0A183 80 aa2.99□□□□□ -1.93
SDHC-202ENST00000367975 C20orf166-AS1Q96NR2 134 aa2.99□□□□□ -1.93
SDHC-202ENST00000367975 A8MUU9 505 aa2.96□□□□□ -1.94
SDHC-202ENST00000367975 NDUFAF8A1L188 74 aa2.95□□□□□ -1.94
SDHC-202ENST00000367975 KRTAP10-2P60368 255 aa2.95□□□□□ -1.94
SDHC-202ENST00000367975 KRTAP10-1P60331 282 aa2.95□□□□□ -1.94
SDHC-202ENST00000367975 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
SDHC-202ENST00000367975 C10orf95Q9H7T3 257 aa2.93□□□□□ -1.94
SDHC-202ENST00000367975 TNP1P09430 55 aa2.93□□□□□ -1.94
SDHC-202ENST00000367975 LYSTQ99698 3801 aa2.92□□□□□ -1.94
SDHC-202ENST00000367975 NOTCH2NLQ7Z3S9 236 aa2.92□□□□□ -1.94
SDHC-202ENST00000367975 FBN1P35555 2871 aaKnown RBP2.92□□□□□ -1.94
SDHC-202ENST00000367975 TRRAPQ9Y4A5 3859 aa2.92□□□□□ -1.94
SDHC-202ENST00000367975 A8MU10 97 aa2.89□□□□□ -1.95
SDHC-202ENST00000367975 FBN3Q75N90 2809 aa2.88□□□□□ -1.95
SDHC-202ENST00000367975 Q6ZRN7 208 aaPredicted RBP2.88□□□□□ -1.95
SDHC-202ENST00000367975 OTOGQ6ZRI0 2925 aa2.88□□□□□ -1.95
SDHC-202ENST00000367975 KRTAP13-2Q52LG2 175 aa2.87□□□□□ -1.95
SDHC-202ENST00000367975 KRTAP11-1Q8IUC1 163 aa2.87□□□□□ -1.95
SDHC-202ENST00000367975 KRTAP13-1Q8IUC0 172 aa2.86□□□□□ -1.95
SDHC-202ENST00000367975 PRO2289Q9P1D8 64 aa2.81□□□□□ -1.96
SDHC-202ENST00000367975 COL7A1Q02388 2944 aa2.8□□□□□ -1.96
SDHC-202ENST00000367975 P0C880 135 aa2.79□□□□□ -1.96
SDHC-202ENST00000367975 CMYA5Q8N3K9 4069 aa2.78□□□□□ -1.96
SDHC-202ENST00000367975 KRTAP7-1Q8IUC3 87 aa2.77□□□□□ -1.97
SDHC-202ENST00000367975 XP32Q5T750 250 aa2.76□□□□□ -1.97
SDHC-202ENST00000367975 KRTAP10-8P60410 259 aa2.75□□□□□ -1.97
SDHC-202ENST00000367975 H0YAA0 97 aa2.75□□□□□ -1.97
SDHC-202ENST00000367975 ANK3Q12955 4377 aaKnown RBP2.73□□□□□ -1.97
SDHC-202ENST00000367975 DNAH7Q8WXX0 4024 aa2.73□□□□□ -1.97
SDHC-202ENST00000367975 FRAS1Q86XX4 4008 aa2.73□□□□□ -1.97
SDHC-202ENST00000367975 TPRXLQ17RH7 258 aa2.72□□□□□ -1.97
SDHC-202ENST00000367975 KRTAP1-4P0C5Y4 121 aa2.67□□□□□ -1.98
SDHC-202ENST00000367975 MEGF8Q7Z7M0 2845 aa2.65□□□□□ -1.99
SDHC-202ENST00000367975 KMT2AQ03164 3969 aa2.65□□□□□ -1.99
SDHC-202ENST00000367975 KRTAP10-10P60014 251 aa2.64□□□□□ -1.99
SDHC-202ENST00000367975 A0A1B0GVY2 172 aa2.64□□□□□ -1.99
SDHC-202ENST00000367975 KRTAP13-3Q3SY46 172 aa2.64□□□□□ -1.99
SDHC-202ENST00000367975 HECTD4Q9Y4D8 3996 aa2.63□□□□□ -1.99
SDHC-202ENST00000367975 KRTAP13-4Q3LI77 160 aa2.62□□□□□ -1.99
SDHC-202ENST00000367975 KRTAP12-2P59991 146 aa2.57□□□□□ -2
SDHC-202ENST00000367975 DNAH3Q8TD57 4116 aa2.57□□□□□ -2
SDHC-202ENST00000367975 INE1O15225 51 aa2.53□□□□□ -2
SDHC-202ENST00000367975 KRTAP23-1A1A580 65 aa2.53□□□□□ -2
SDHC-202ENST00000367975 PRKDCP78527 4128 aaKnown RBP2.52□□□□□ -2.01
SDHC-202ENST00000367975 KRTAP12-1P59990 96 aa2.49□□□□□ -2.01
SDHC-202ENST00000367975 KRTAP15-1Q3LI76 137 aa2.47□□□□□ -2.01
SDHC-202ENST00000367975 PKHD1P08F94 4074 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms