RNA–Protein interactions for RNA: ENST00000367696.6

RC3H1-203, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RC3H1, Length 11,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-203ENST00000367696 RPS29P62273 56 aaKnown RBP4.69□□□□□ -1.66
RC3H1-203ENST00000367696 REV3LO60673 3130 aa4.69□□□□□ -1.66
RC3H1-203ENST00000367696 Q6ZSA8 131 aa4.68□□□□□ -1.66
RC3H1-203ENST00000367696 TNRC18O15417 2968 aaPredicted RBP4.66□□□□□ -1.66
RC3H1-203ENST00000367696 ROMO1P60602 79 aa4.65□□□□□ -1.66
RC3H1-203ENST00000367696 S4R3F8 94 aa4.65□□□□□ -1.67
RC3H1-203ENST00000367696 H3BS24 57 aa4.65□□□□□ -1.67
RC3H1-203ENST00000367696 J3QL48 77 aa4.64□□□□□ -1.67
RC3H1-203ENST00000367696 ADM2Q7Z4H4 148 aa4.64□□□□□ -1.67
RC3H1-203ENST00000367696 TENM3Q9P273 2699 aa4.63□□□□□ -1.67
RC3H1-203ENST00000367696 FLG2Q5D862 2391 aaPredicted RBP4.61□□□□□ -1.67
RC3H1-203ENST00000367696 DMXL1Q9Y485 3027 aa4.61□□□□□ -1.67
RC3H1-203ENST00000367696 CRYBG3Q68DQ2 2970 aa4.6□□□□□ -1.67
RC3H1-203ENST00000367696 COL6A3P12111 3177 aa4.59□□□□□ -1.67
RC3H1-203ENST00000367696 KRTAP25-1Q3LHN0 102 aa4.58□□□□□ -1.68
RC3H1-203ENST00000367696 A8MUU9 505 aa4.56□□□□□ -1.68
RC3H1-203ENST00000367696 CAMK2N1Q7Z7J9 78 aa4.56□□□□□ -1.68
RC3H1-203ENST00000367696 LUZP6Q538Z0 58 aa4.56□□□□□ -1.68
RC3H1-203ENST00000367696 DNAH14Q0VDD8 3507 aa4.55□□□□□ -1.68
RC3H1-203ENST00000367696 C20orf166-AS1Q96NR2 134 aa4.55□□□□□ -1.68
RC3H1-203ENST00000367696 KRTAP1-4P0C5Y4 121 aa4.55□□□□□ -1.68
RC3H1-203ENST00000367696 PDZD2O15018 2839 aa4.55□□□□□ -1.68
RC3H1-203ENST00000367696 R4GN34 69 aa4.54□□□□□ -1.68
RC3H1-203ENST00000367696 Q5VSD8 79 aa4.53□□□□□ -1.68
RC3H1-203ENST00000367696 LOC400499M0QZD8 3231 aa4.53□□□□□ -1.68
RC3H1-203ENST00000367696 KRTAP16-1A8MUX0 517 aa4.53□□□□□ -1.68
RC3H1-203ENST00000367696 TENM1Q9UKZ4 2725 aa4.53□□□□□ -1.68
RC3H1-203ENST00000367696 KRTAP13-3Q3SY46 172 aa4.52□□□□□ -1.69
RC3H1-203ENST00000367696 SEC61BP60468 96 aaKnown RBP4.52□□□□□ -1.69
RC3H1-203ENST00000367696 SPEGQ15772 3267 aa4.49□□□□□ -1.69
RC3H1-203ENST00000367696 M0QZ58 72 aa4.48□□□□□ -1.69
RC3H1-203ENST00000367696 VWFP04275 2813 aa4.47□□□□□ -1.69
RC3H1-203ENST00000367696 H0YAA0 97 aa4.41□□□□□ -1.7
RC3H1-203ENST00000367696 A0A0A0MQY5 61 aa4.41□□□□□ -1.7
RC3H1-203ENST00000367696 SPTBN5Q9NRC6 3674 aaKnown RBP4.4□□□□□ -1.71
RC3H1-203ENST00000367696 TGP01266 2768 aa4.39□□□□□ -1.71
RC3H1-203ENST00000367696 TENM2Q9NT68 2774 aa4.38□□□□□ -1.71
RC3H1-203ENST00000367696 CELSR1Q9NYQ6 3014 aa4.37□□□□□ -1.71
RC3H1-203ENST00000367696 KRTAP21-3Q3LHN1 58 aa4.36□□□□□ -1.71
RC3H1-203ENST00000367696 OTOGQ6ZRI0 2925 aa4.34□□□□□ -1.71
RC3H1-203ENST00000367696 MYO15AQ9UKN7 3530 aa4.34□□□□□ -1.72
RC3H1-203ENST00000367696 FBN1P35555 2871 aaKnown RBP4.33□□□□□ -1.72
RC3H1-203ENST00000367696 DCHS1Q96JQ0 3298 aa4.33□□□□□ -1.72
RC3H1-203ENST00000367696 NDUFAF8A1L188 74 aa4.33□□□□□ -1.72
RC3H1-203ENST00000367696 USP34Q70CQ2 3546 aa4.32□□□□□ -1.72
RC3H1-203ENST00000367696 XP32Q5T750 250 aa4.32□□□□□ -1.72
RC3H1-203ENST00000367696 PKD1L1Q8TDX9 2849 aa4.31□□□□□ -1.72
RC3H1-203ENST00000367696 M0R2T5 61 aa4.29□□□□□ -1.72
RC3H1-203ENST00000367696 ANK3Q12955 4377 aaKnown RBP4.29□□□□□ -1.72
RC3H1-203ENST00000367696 C10orf95Q9H7T3 257 aa4.27□□□□□ -1.73
RC3H1-203ENST00000367696 P0C880 135 aa4.25□□□□□ -1.73
RC3H1-203ENST00000367696 KRTAP10-8P60410 259 aa4.23□□□□□ -1.73
RC3H1-203ENST00000367696 RELNP78509 3460 aa4.23□□□□□ -1.73
RC3H1-203ENST00000367696 KRTAP3-1Q9BYR8 98 aa4.22□□□□□ -1.73
RC3H1-203ENST00000367696 PLAC4Q8WY50 150 aa4.22□□□□□ -1.73
RC3H1-203ENST00000367696 PP632Q6XCG6 107 aa4.21□□□□□ -1.74
RC3H1-203ENST00000367696 FBN3Q75N90 2809 aa4.19□□□□□ -1.74
RC3H1-203ENST00000367696 SRRM2Q9UQ35 2752 aaKnown RBP4.19□□□□□ -1.74
RC3H1-203ENST00000367696 TPRXLQ17RH7 258 aa4.19□□□□□ -1.74
RC3H1-203ENST00000367696 TNP1P09430 55 aa4.18□□□□□ -1.74
RC3H1-203ENST00000367696 A0A1B0GVY2 172 aa4.16□□□□□ -1.74
RC3H1-203ENST00000367696 MEGF8Q7Z7M0 2845 aa4.12□□□□□ -1.75
RC3H1-203ENST00000367696 KRTAP10-6P60371 365 aaPredicted RBP4.1□□□□□ -1.75
RC3H1-203ENST00000367696 WDFY3Q8IZQ1 3526 aa4.08□□□□□ -1.76
RC3H1-203ENST00000367696 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
RC3H1-203ENST00000367696 KRTAP12-1P59990 96 aa4.07□□□□□ -1.76
RC3H1-203ENST00000367696 KRTAP13-4Q3LI77 160 aa4.05□□□□□ -1.76
RC3H1-203ENST00000367696 PLECQ15149 4684 aaKnown RBP4.02□□□□□ -1.77
RC3H1-203ENST00000367696 LAMA5O15230 3695 aa4.02□□□□□ -1.77
RC3H1-203ENST00000367696 DNAH11Q96DT5 4516 aa4.01□□□□□ -1.77
RC3H1-203ENST00000367696 DNAH10Q8IVF4 4471 aa4□□□□□ -1.77
RC3H1-203ENST00000367696 KRTAP3-2Q9BYR7 98 aa4□□□□□ -1.77
RC3H1-203ENST00000367696 SMG1Q96Q15 3661 aaKnown RBP3.98□□□□□ -1.77
RC3H1-203ENST00000367696 ZFHX4Q86UP3 3567 aa3.97□□□□□ -1.77
RC3H1-203ENST00000367696 KRTAP3-3Q9BYR6 98 aa3.96□□□□□ -1.78
RC3H1-203ENST00000367696 DNAH5Q8TE73 4624 aa3.96□□□□□ -1.78
RC3H1-203ENST00000367696 MUC3AQ02505 3323 aa3.96□□□□□ -1.78
RC3H1-203ENST00000367696 KRTAP10-4P60372 401 aaPredicted RBP3.95□□□□□ -1.78
RC3H1-203ENST00000367696 DNAH2Q9P225 4427 aa3.94□□□□□ -1.78
RC3H1-203ENST00000367696 HUWE1Q7Z6Z7 4374 aaKnown RBP3.94□□□□□ -1.78
RC3H1-203ENST00000367696 CSMD1Q96PZ7 3565 aa3.93□□□□□ -1.78
RC3H1-203ENST00000367696 DNAH17Q9UFH2 4485 aa3.92□□□□□ -1.78
RC3H1-203ENST00000367696 ASPMQ8IZT6 3477 aa3.92□□□□□ -1.78
RC3H1-203ENST00000367696 DYNC1H1Q14204 4646 aaKnown RBP3.91□□□□□ -1.78
RC3H1-203ENST00000367696 COL7A1Q02388 2944 aa3.91□□□□□ -1.78
RC3H1-203ENST00000367696 MT1HL1P0DM35 61 aa3.9□□□□□ -1.79
RC3H1-203ENST00000367696 TRRAPQ9Y4A5 3859 aa3.88□□□□□ -1.79
RC3H1-203ENST00000367696 DNAH9Q9NYC9 4486 aa3.88□□□□□ -1.79
RC3H1-203ENST00000367696 DNHD1Q96M86 4753 aa3.87□□□□□ -1.79
RC3H1-203ENST00000367696 KRTAP10-10P60014 251 aa3.86□□□□□ -1.79
RC3H1-203ENST00000367696 KRTAP15-1Q3LI76 137 aa3.85□□□□□ -1.79
RC3H1-203ENST00000367696 DMDP11532 3685 aa3.85□□□□□ -1.79
RC3H1-203ENST00000367696 VPS13DQ5THJ4 4388 aa3.85□□□□□ -1.79
RC3H1-203ENST00000367696 SVEP1Q4LDE5 3571 aa3.83□□□□□ -1.8
RC3H1-203ENST00000367696 ZFHX3Q15911 3703 aa3.82□□□□□ -1.8
RC3H1-203ENST00000367696 LRP1BQ9NZR2 4599 aa3.8□□□□□ -1.8
RC3H1-203ENST00000367696 DNAH1Q9P2D7 4330 aa3.79□□□□□ -1.8
RC3H1-203ENST00000367696 CSMD2Q7Z408 3487 aa3.79□□□□□ -1.8
RC3H1-203ENST00000367696 SACSQ9NZJ4 4579 aa3.78□□□□□ -1.8
RC3H1-203ENST00000367696 FAT1Q14517 4588 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms