RNA–Protein interactions for RNA: ENST00000367630.8

VTA1-202, Transcript of vesicle trafficking 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTA1, Length 7,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-202ENST00000367630 A6NN06 94 aa4.24□□□□□ -1.73
VTA1-202ENST00000367630 Q6ZSA8 131 aa4.23□□□□□ -1.73
VTA1-202ENST00000367630 ANAPC11Q9NYG5 84 aa4.23□□□□□ -1.73
VTA1-202ENST00000367630 PDZD2O15018 2839 aa4.22□□□□□ -1.73
VTA1-202ENST00000367630 BSNQ9UPA5 3926 aa4.21□□□□□ -1.73
VTA1-202ENST00000367630 CRIPTQ9P021 101 aa4.2□□□□□ -1.74
VTA1-202ENST00000367630 SPENQ96T58 3664 aaKnown RBP4.2□□□□□ -1.74
VTA1-202ENST00000367630 LINC01554Q52M75 96 aa4.2□□□□□ -1.74
VTA1-202ENST00000367630 TENM1Q9UKZ4 2725 aa4.19□□□□□ -1.74
VTA1-202ENST00000367630 H1FX-AS1Q4G0G2 97 aa4.18□□□□□ -1.74
VTA1-202ENST00000367630 C20orf166-AS1Q96NR2 134 aa4.18□□□□□ -1.74
VTA1-202ENST00000367630 A8MUU9 505 aa4.18□□□□□ -1.74
VTA1-202ENST00000367630 SPINK7P58062 85 aa4.18□□□□□ -1.74
VTA1-202ENST00000367630 KRTAP11-1Q8IUC1 163 aa4.17□□□□□ -1.74
VTA1-202ENST00000367630 VWFP04275 2813 aa4.17□□□□□ -1.74
VTA1-202ENST00000367630 NBEAL2Q6ZNJ1 2754 aa4.17□□□□□ -1.74
VTA1-202ENST00000367630 PANO1I0J062 215 aa4.16□□□□□ -1.74
VTA1-202ENST00000367630 KRTAP10-1P60331 282 aa4.16□□□□□ -1.74
VTA1-202ENST00000367630 S4R3F8 94 aa4.16□□□□□ -1.74
VTA1-202ENST00000367630 NOTCH2NLQ7Z3S9 236 aa4.16□□□□□ -1.74
VTA1-202ENST00000367630 STAB2Q8WWQ8 2551 aa4.16□□□□□ -1.74
VTA1-202ENST00000367630 KRTAP13-2Q52LG2 175 aa4.12□□□□□ -1.75
VTA1-202ENST00000367630 CSAG1Q6PB30 78 aa4.12□□□□□ -1.75
VTA1-202ENST00000367630 Q8N1X5 172 aa4.12□□□□□ -1.75
VTA1-202ENST00000367630 KRTAP13-3Q3SY46 172 aa4.12□□□□□ -1.75
VTA1-202ENST00000367630 RPL37P61927 97 aaKnown RBP4.11□□□□□ -1.75
VTA1-202ENST00000367630 ROMO1P60602 79 aa4.11□□□□□ -1.75
VTA1-202ENST00000367630 C9orf92A6NGG3 77 aa4.11□□□□□ -1.75
VTA1-202ENST00000367630 KRTAP10-2P60368 255 aa4.11□□□□□ -1.75
VTA1-202ENST00000367630 SEC61BP60468 96 aaKnown RBP4.09□□□□□ -1.75
VTA1-202ENST00000367630 KRTAP16-1A8MUX0 517 aa4.09□□□□□ -1.75
VTA1-202ENST00000367630 M0QZ58 72 aa4.08□□□□□ -1.76
VTA1-202ENST00000367630 CSMD2Q7Z408 3487 aa4.08□□□□□ -1.76
VTA1-202ENST00000367630 SVEP1Q4LDE5 3571 aa4.08□□□□□ -1.76
VTA1-202ENST00000367630 PKD1L1Q8TDX9 2849 aa4.07□□□□□ -1.76
VTA1-202ENST00000367630 CSMD1Q96PZ7 3565 aa4.07□□□□□ -1.76
VTA1-202ENST00000367630 KRTAP1-4P0C5Y4 121 aa4.06□□□□□ -1.76
VTA1-202ENST00000367630 FBN1P35555 2871 aaKnown RBP4.06□□□□□ -1.76
VTA1-202ENST00000367630 SPINT4Q6UDR6 99 aa4.06□□□□□ -1.76
VTA1-202ENST00000367630 KRTAP25-1Q3LHN0 102 aa4.02□□□□□ -1.77
VTA1-202ENST00000367630 ZFHX3Q15911 3703 aa4.01□□□□□ -1.77
VTA1-202ENST00000367630 TENM3Q9P273 2699 aa4□□□□□ -1.77
VTA1-202ENST00000367630 Q5VSD8 79 aa3.99□□□□□ -1.77
VTA1-202ENST00000367630 J3QL48 77 aa3.99□□□□□ -1.77
VTA1-202ENST00000367630 SMR3BP02814 79 aaPredicted RBP3.99□□□□□ -1.77
VTA1-202ENST00000367630 NBPF19A0A087WUL8 3843 aa3.96□□□□□ -1.78
VTA1-202ENST00000367630 CUBNO60494 3623 aa3.93□□□□□ -1.78
VTA1-202ENST00000367630 TENM2Q9NT68 2774 aa3.92□□□□□ -1.78
VTA1-202ENST00000367630 PP632Q6XCG6 107 aa3.92□□□□□ -1.78
VTA1-202ENST00000367630 PRAC1Q96KF2 57 aa3.92□□□□□ -1.78
VTA1-202ENST00000367630 TPRXLQ17RH7 258 aa3.92□□□□□ -1.78
VTA1-202ENST00000367630 ZNF469Q96JG9 3925 aaPredicted RBP3.92□□□□□ -1.78
VTA1-202ENST00000367630 VPS13CQ709C8 3753 aa3.91□□□□□ -1.78
VTA1-202ENST00000367630 H0YAA0 97 aa3.91□□□□□ -1.78
VTA1-202ENST00000367630 LUZP6Q538Z0 58 aa3.91□□□□□ -1.78
VTA1-202ENST00000367630 R4GN34 69 aa3.89□□□□□ -1.79
VTA1-202ENST00000367630 A0A1B0GVY2 172 aa3.89□□□□□ -1.79
VTA1-202ENST00000367630 A0A0D9SG42 100 aa3.88□□□□□ -1.79
VTA1-202ENST00000367630 ADM2Q7Z4H4 148 aa3.87□□□□□ -1.79
VTA1-202ENST00000367630 TGP01266 2768 aa3.87□□□□□ -1.79
VTA1-202ENST00000367630 XP32Q5T750 250 aa3.86□□□□□ -1.79
VTA1-202ENST00000367630 ANK3Q12955 4377 aaKnown RBP3.84□□□□□ -1.79
VTA1-202ENST00000367630 KRTAP10-8P60410 259 aa3.84□□□□□ -1.8
VTA1-202ENST00000367630 CAMK2N1Q7Z7J9 78 aa3.83□□□□□ -1.8
VTA1-202ENST00000367630 TRRAPQ9Y4A5 3859 aa3.82□□□□□ -1.8
VTA1-202ENST00000367630 ALMS1Q8TCU4 4167 aa3.81□□□□□ -1.8
VTA1-202ENST00000367630 A0A0A0MQY5 61 aa3.81□□□□□ -1.8
VTA1-202ENST00000367630 FBN3Q75N90 2809 aa3.77□□□□□ -1.81
VTA1-202ENST00000367630 A8MU10 97 aa3.77□□□□□ -1.81
VTA1-202ENST00000367630 H3BS24 57 aa3.76□□□□□ -1.81
VTA1-202ENST00000367630 AKAP9Q99996 3911 aa3.75□□□□□ -1.81
VTA1-202ENST00000367630 HUWE1Q7Z6Z7 4374 aaKnown RBP3.73□□□□□ -1.81
VTA1-202ENST00000367630 PLAC4Q8WY50 150 aa3.73□□□□□ -1.81
VTA1-202ENST00000367630 TNP1P09430 55 aa3.71□□□□□ -1.82
VTA1-202ENST00000367630 MEGF8Q7Z7M0 2845 aa3.71□□□□□ -1.82
VTA1-202ENST00000367630 COL7A1Q02388 2944 aa3.7□□□□□ -1.82
VTA1-202ENST00000367630 DNAH6Q9C0G6 4158 aa3.69□□□□□ -1.82
VTA1-202ENST00000367630 KRTAP23-1A1A580 65 aa3.66□□□□□ -1.82
VTA1-202ENST00000367630 KRTAP3-1Q9BYR8 98 aa3.66□□□□□ -1.82
VTA1-202ENST00000367630 P0C880 135 aa3.65□□□□□ -1.83
VTA1-202ENST00000367630 KRTAP10-4P60372 401 aaPredicted RBP3.63□□□□□ -1.83
VTA1-202ENST00000367630 DNAH2Q9P225 4427 aa3.62□□□□□ -1.83
VTA1-202ENST00000367630 DYNC2H1Q8NCM8 4307 aaKnown RBP3.6□□□□□ -1.83
VTA1-202ENST00000367630 KRTAP13-4Q3LI77 160 aa3.59□□□□□ -1.83
VTA1-202ENST00000367630 KRTAP10-6P60371 365 aaPredicted RBP3.59□□□□□ -1.84
VTA1-202ENST00000367630 DNHD1Q96M86 4753 aa3.59□□□□□ -1.84
VTA1-202ENST00000367630 DNAH3Q8TD57 4116 aa3.57□□□□□ -1.84
VTA1-202ENST00000367630 KRTAP12-1P59990 96 aa3.56□□□□□ -1.84
VTA1-202ENST00000367630 M0R2T5 61 aa3.56□□□□□ -1.84
VTA1-202ENST00000367630 DNAH10Q8IVF4 4471 aa3.56□□□□□ -1.84
VTA1-202ENST00000367630 DNAH17Q9UFH2 4485 aa3.53□□□□□ -1.85
VTA1-202ENST00000367630 KRTAP3-2Q9BYR7 98 aa3.52□□□□□ -1.85
VTA1-202ENST00000367630 SRRM2Q9UQ35 2752 aaKnown RBP3.51□□□□□ -1.85
VTA1-202ENST00000367630 KRTAP3-3Q9BYR6 98 aa3.51□□□□□ -1.85
VTA1-202ENST00000367630 VPS13DQ5THJ4 4388 aa3.5□□□□□ -1.85
VTA1-202ENST00000367630 KRTAP12-2P59991 146 aa3.5□□□□□ -1.85
VTA1-202ENST00000367630 DNAH8Q96JB1 4490 aa3.49□□□□□ -1.85
VTA1-202ENST00000367630 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
VTA1-202ENST00000367630 DMBT1Q9UGM3 2413 aaPredicted RBP3.49□□□□□ -1.85
VTA1-202ENST00000367630 DNAH9Q9NYC9 4486 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 354.7 ms