RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 RPS29P62273 56 aaKnown RBP6.91□□□□□ -1.3
SHPRH-202ENST00000367503 BOD1L1Q8NFC6 3051 aa6.9□□□□□ -1.3
SHPRH-202ENST00000367503 C20orf166-AS1Q96NR2 134 aa6.9□□□□□ -1.3
SHPRH-202ENST00000367503 KMT2BQ9UMN6 2715 aaPredicted RBP6.9□□□□□ -1.31
SHPRH-202ENST00000367503 M0QZ58 72 aa6.89□□□□□ -1.31
SHPRH-202ENST00000367503 HIVEP1P15822 2718 aa6.88□□□□□ -1.31
SHPRH-202ENST00000367503 SEC61BP60468 96 aaKnown RBP6.88□□□□□ -1.31
SHPRH-202ENST00000367503 ZZEF1O43149 2961 aa6.86□□□□□ -1.31
SHPRH-202ENST00000367503 CELSR2Q9HCU4 2923 aa6.86□□□□□ -1.31
SHPRH-202ENST00000367503 Q5VSD8 79 aa6.84□□□□□ -1.31
SHPRH-202ENST00000367503 ZANQ9Y493 2812 aa6.83□□□□□ -1.32
SHPRH-202ENST00000367503 KRTAP13-2Q52LG2 175 aa6.83□□□□□ -1.32
SHPRH-202ENST00000367503 SZT2Q5T011 3432 aa6.83□□□□□ -1.32
SHPRH-202ENST00000367503 H0YAA0 97 aa6.81□□□□□ -1.32
SHPRH-202ENST00000367503 M0R2T5 61 aa6.77□□□□□ -1.33
SHPRH-202ENST00000367503 PLAC4Q8WY50 150 aa6.76□□□□□ -1.33
SHPRH-202ENST00000367503 DCHS2Q6V1P9 2916 aa6.76□□□□□ -1.33
SHPRH-202ENST00000367503 C10orf95Q9H7T3 257 aa6.75□□□□□ -1.33
SHPRH-202ENST00000367503 CFAP47Q6ZTR5 3102 aa6.73□□□□□ -1.33
SHPRH-202ENST00000367503 COL6A3P12111 3177 aa6.73□□□□□ -1.33
SHPRH-202ENST00000367503 TENM4Q6N022 2769 aa6.7□□□□□ -1.34
SHPRH-202ENST00000367503 REV3LO60673 3130 aa6.68□□□□□ -1.34
SHPRH-202ENST00000367503 HRNRQ86YZ3 2850 aaPredicted RBP6.68□□□□□ -1.34
SHPRH-202ENST00000367503 NF1P21359 2839 aa6.67□□□□□ -1.34
SHPRH-202ENST00000367503 FBN2P35556 2912 aa6.64□□□□□ -1.35
SHPRH-202ENST00000367503 TNRC18O15417 2968 aaPredicted RBP6.63□□□□□ -1.35
SHPRH-202ENST00000367503 P0C880 135 aa6.63□□□□□ -1.35
SHPRH-202ENST00000367503 EYSQ5T1H1 3165 aa6.62□□□□□ -1.35
SHPRH-202ENST00000367503 KRTAP13-3Q3SY46 172 aa6.57□□□□□ -1.36
SHPRH-202ENST00000367503 KRTAP1-4P0C5Y4 121 aa6.53□□□□□ -1.36
SHPRH-202ENST00000367503 TENM3Q9P273 2699 aa6.53□□□□□ -1.36
SHPRH-202ENST00000367503 CRYBG3Q68DQ2 2970 aa6.52□□□□□ -1.37
SHPRH-202ENST00000367503 SPEGQ15772 3267 aa6.51□□□□□ -1.37
SHPRH-202ENST00000367503 PP632Q6XCG6 107 aa6.5□□□□□ -1.37
SHPRH-202ENST00000367503 DMXL1Q9Y485 3027 aa6.5□□□□□ -1.37
SHPRH-202ENST00000367503 MXRA5Q9NR99 2828 aa6.49□□□□□ -1.37
SHPRH-202ENST00000367503 LOC400499M0QZD8 3231 aa6.48□□□□□ -1.37
SHPRH-202ENST00000367503 USP34Q70CQ2 3546 aa6.45□□□□□ -1.38
SHPRH-202ENST00000367503 TNP1P09430 55 aa6.44□□□□□ -1.38
SHPRH-202ENST00000367503 TENM1Q9UKZ4 2725 aa6.41□□□□□ -1.38
SHPRH-202ENST00000367503 KRTAP10-8P60410 259 aa6.4□□□□□ -1.39
SHPRH-202ENST00000367503 SPTBN5Q9NRC6 3674 aaKnown RBP6.39□□□□□ -1.39
SHPRH-202ENST00000367503 TGP01266 2768 aa6.38□□□□□ -1.39
SHPRH-202ENST00000367503 CELSR1Q9NYQ6 3014 aa6.36□□□□□ -1.39
SHPRH-202ENST00000367503 TPRXLQ17RH7 258 aa6.36□□□□□ -1.39
SHPRH-202ENST00000367503 XP32Q5T750 250 aa6.36□□□□□ -1.39
SHPRH-202ENST00000367503 KRTAP21-3Q3LHN1 58 aa6.34□□□□□ -1.39
SHPRH-202ENST00000367503 MYO15AQ9UKN7 3530 aa6.29□□□□□ -1.4
SHPRH-202ENST00000367503 PDZD2O15018 2839 aa6.28□□□□□ -1.4
SHPRH-202ENST00000367503 KRTAP12-2P59991 146 aa6.26□□□□□ -1.41
SHPRH-202ENST00000367503 TENM2Q9NT68 2774 aa6.22□□□□□ -1.41
SHPRH-202ENST00000367503 PKD1L1Q8TDX9 2849 aa6.17□□□□□ -1.42
SHPRH-202ENST00000367503 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
SHPRH-202ENST00000367503 DCHS1Q96JQ0 3298 aa6.15□□□□□ -1.42
SHPRH-202ENST00000367503 KRTAP12-1P59990 96 aa6.15□□□□□ -1.43
SHPRH-202ENST00000367503 KRTAP3-1Q9BYR8 98 aa6.13□□□□□ -1.43
SHPRH-202ENST00000367503 RELNP78509 3460 aa6.12□□□□□ -1.43
SHPRH-202ENST00000367503 WDFY3Q8IZQ1 3526 aa6.09□□□□□ -1.43
SHPRH-202ENST00000367503 VWFP04275 2813 aa6.08□□□□□ -1.44
SHPRH-202ENST00000367503 CSMD1Q96PZ7 3565 aa6.07□□□□□ -1.44
SHPRH-202ENST00000367503 KRTAP13-4Q3LI77 160 aa6.06□□□□□ -1.44
SHPRH-202ENST00000367503 FBN1P35555 2871 aaKnown RBP6.03□□□□□ -1.44
SHPRH-202ENST00000367503 ZFHX4Q86UP3 3567 aa6.03□□□□□ -1.44
SHPRH-202ENST00000367503 KRTAP10-6P60371 365 aaPredicted RBP6.02□□□□□ -1.45
SHPRH-202ENST00000367503 A0A1B0GVY2 172 aa6□□□□□ -1.45
SHPRH-202ENST00000367503 FBN3Q75N90 2809 aa5.94□□□□□ -1.46
SHPRH-202ENST00000367503 OTOGQ6ZRI0 2925 aa5.9□□□□□ -1.46
SHPRH-202ENST00000367503 SMG1Q96Q15 3661 aaKnown RBP5.9□□□□□ -1.46
SHPRH-202ENST00000367503 KRTAP10-10P60014 251 aa5.89□□□□□ -1.47
SHPRH-202ENST00000367503 SRRM2Q9UQ35 2752 aaKnown RBP5.87□□□□□ -1.47
SHPRH-202ENST00000367503 LAMA5O15230 3695 aa5.87□□□□□ -1.47
SHPRH-202ENST00000367503 ZFHX3Q15911 3703 aa5.86□□□□□ -1.47
SHPRH-202ENST00000367503 MEGF8Q7Z7M0 2845 aa5.84□□□□□ -1.48
SHPRH-202ENST00000367503 PRO2289Q9P1D8 64 aa5.84□□□□□ -1.48
SHPRH-202ENST00000367503 ASPMQ8IZT6 3477 aa5.82□□□□□ -1.48
SHPRH-202ENST00000367503 KRTAP3-2Q9BYR7 98 aa5.81□□□□□ -1.48
SHPRH-202ENST00000367503 INE1O15225 51 aa5.8□□□□□ -1.48
SHPRH-202ENST00000367503 KRTAP3-3Q9BYR6 98 aa5.74□□□□□ -1.49
SHPRH-202ENST00000367503 SVEP1Q4LDE5 3571 aa5.74□□□□□ -1.49
SHPRH-202ENST00000367503 COL7A1Q02388 2944 aa5.73□□□□□ -1.49
SHPRH-202ENST00000367503 DMDP11532 3685 aa5.69□□□□□ -1.5
SHPRH-202ENST00000367503 NBPF19A0A087WUL8 3843 aa5.68□□□□□ -1.5
SHPRH-202ENST00000367503 ANK3Q12955 4377 aaKnown RBP5.66□□□□□ -1.5
SHPRH-202ENST00000367503 MUC3AQ02505 3323 aa5.63□□□□□ -1.51
SHPRH-202ENST00000367503 CUBNO60494 3623 aa5.62□□□□□ -1.51
SHPRH-202ENST00000367503 SPENQ96T58 3664 aaKnown RBP5.61□□□□□ -1.51
SHPRH-202ENST00000367503 TRRAPQ9Y4A5 3859 aa5.57□□□□□ -1.52
SHPRH-202ENST00000367503 MT1HL1P0DM35 61 aa5.53□□□□□ -1.52
SHPRH-202ENST00000367503 CSMD2Q7Z408 3487 aa5.51□□□□□ -1.53
SHPRH-202ENST00000367503 KRTAP10-4P60372 401 aaPredicted RBP5.5□□□□□ -1.53
SHPRH-202ENST00000367503 KRTAP23-1A1A580 65 aa5.44□□□□□ -1.54
SHPRH-202ENST00000367503 HUWE1Q7Z6Z7 4374 aaKnown RBP5.34□□□□□ -1.55
SHPRH-202ENST00000367503 BSNQ9UPA5 3926 aa5.31□□□□□ -1.56
SHPRH-202ENST00000367503 ALMS1Q8TCU4 4167 aa5.31□□□□□ -1.56
SHPRH-202ENST00000367503 VPS13CQ709C8 3753 aa5.27□□□□□ -1.57
SHPRH-202ENST00000367503 LORP23490 312 aaPredicted RBP5.26□□□□□ -1.57
SHPRH-202ENST00000367503 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
SHPRH-202ENST00000367503 LCE3AQ5TA76 89 aa5.24□□□□□ -1.57
SHPRH-202ENST00000367503 KRTAP12-3P60328 96 aa5.23□□□□□ -1.57
SHPRH-202ENST00000367503 KRTAP4-5Q9BYR2 181 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 159.3 ms