RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 ASH1LQ9NR48 2969 aaKnown RBP8.05□□□□□ -1.12
FBXO28-201ENST00000366862 CELSR3Q9NYQ7 3312 aa8.05□□□□□ -1.12
FBXO28-201ENST00000366862 LRBAP50851 2863 aa8.05□□□□□ -1.12
FBXO28-201ENST00000366862 UTP20O75691 2785 aaKnown RBP8.04□□□□□ -1.12
FBXO28-201ENST00000366862 XIRP2A4UGR9 3374 aa8.02□□□□□ -1.13
FBXO28-201ENST00000366862 BRCA2P51587 3418 aa8.02□□□□□ -1.13
FBXO28-201ENST00000366862 ADGRG4Q8IZF6 3080 aa8□□□□□ -1.13
FBXO28-201ENST00000366862 HIVEP1P15822 2718 aa7.98□□□□□ -1.13
FBXO28-201ENST00000366862 ZZEF1O43149 2961 aa7.97□□□□□ -1.13
FBXO28-201ENST00000366862 NIPBLQ6KC79 2804 aaeCLIP7.95□□□□□ -1.14
FBXO28-201ENST00000366862 ATMQ13315 3056 aa7.95□□□□□ -1.14
FBXO28-201ENST00000366862 KRTAP12-2P59991 146 aa7.93□□□□□ -1.14
FBXO28-201ENST00000366862 TPRXLQ17RH7 258 aa7.93□□□□□ -1.14
FBXO28-201ENST00000366862 DMXL2Q8TDJ6 3036 aa7.93□□□□□ -1.14
FBXO28-201ENST00000366862 LAMA1P25391 3075 aa7.92□□□□□ -1.14
FBXO28-201ENST00000366862 TACC2O95359 2948 aa7.9□□□□□ -1.14
FBXO28-201ENST00000366862 DNAH14Q0VDD8 3507 aa7.9□□□□□ -1.15
FBXO28-201ENST00000366862 FLNCQ14315 2725 aa7.88□□□□□ -1.15
FBXO28-201ENST00000366862 VCANP13611 3396 aa7.87□□□□□ -1.15
FBXO28-201ENST00000366862 CDH23Q9H251 3354 aa7.86□□□□□ -1.15
FBXO28-201ENST00000366862 KRTAP12-1P59990 96 aa7.82□□□□□ -1.16
FBXO28-201ENST00000366862 COL12A1Q99715 3063 aa7.82□□□□□ -1.16
FBXO28-201ENST00000366862 KRTAP13-4Q3LI77 160 aa7.81□□□□□ -1.16
FBXO28-201ENST00000366862 FRYLO94915 3013 aa7.8□□□□□ -1.16
FBXO28-201ENST00000366862 BOD1L1Q8NFC6 3051 aa7.79□□□□□ -1.16
FBXO28-201ENST00000366862 CELSR2Q9HCU4 2923 aa7.79□□□□□ -1.16
FBXO28-201ENST00000366862 COL6A3P12111 3177 aa7.78□□□□□ -1.16
FBXO28-201ENST00000366862 A0A1B0GVY2 172 aa7.78□□□□□ -1.16
FBXO28-201ENST00000366862 TGP01266 2768 aa7.75□□□□□ -1.17
FBXO28-201ENST00000366862 HRNRQ86YZ3 2850 aaPredicted RBP7.73□□□□□ -1.17
FBXO28-201ENST00000366862 KRTAP3-1Q9BYR8 98 aa7.73□□□□□ -1.17
FBXO28-201ENST00000366862 REV3LO60673 3130 aa7.72□□□□□ -1.17
FBXO28-201ENST00000366862 DCHS2Q6V1P9 2916 aa7.69□□□□□ -1.18
FBXO28-201ENST00000366862 PRO2289Q9P1D8 64 aa7.66□□□□□ -1.18
FBXO28-201ENST00000366862 TNRC18O15417 2968 aaPredicted RBP7.66□□□□□ -1.18
FBXO28-201ENST00000366862 ZANQ9Y493 2812 aa7.65□□□□□ -1.18
FBXO28-201ENST00000366862 SZT2Q5T011 3432 aa7.65□□□□□ -1.19
FBXO28-201ENST00000366862 KRTAP21-3Q3LHN1 58 aa7.64□□□□□ -1.19
FBXO28-201ENST00000366862 KRTAP15-1Q3LI76 137 aa7.62□□□□□ -1.19
FBXO28-201ENST00000366862 CFAP47Q6ZTR5 3102 aa7.61□□□□□ -1.19
FBXO28-201ENST00000366862 KRTAP10-10P60014 251 aa7.61□□□□□ -1.19
FBXO28-201ENST00000366862 KRTAP10-6P60371 365 aaPredicted RBP7.6□□□□□ -1.19
FBXO28-201ENST00000366862 FBN2P35556 2912 aa7.54□□□□□ -1.2
FBXO28-201ENST00000366862 EYSQ5T1H1 3165 aa7.54□□□□□ -1.2
FBXO28-201ENST00000366862 NF1P21359 2839 aa7.51□□□□□ -1.21
FBXO28-201ENST00000366862 TENM4Q6N022 2769 aa7.5□□□□□ -1.21
FBXO28-201ENST00000366862 INE1O15225 51 aa7.45□□□□□ -1.22
FBXO28-201ENST00000366862 DMXL1Q9Y485 3027 aa7.45□□□□□ -1.22
FBXO28-201ENST00000366862 CRYBG3Q68DQ2 2970 aa7.43□□□□□ -1.22
FBXO28-201ENST00000366862 TENM3Q9P273 2699 aa7.38□□□□□ -1.23
FBXO28-201ENST00000366862 USP34Q70CQ2 3546 aa7.38□□□□□ -1.23
FBXO28-201ENST00000366862 CELSR1Q9NYQ6 3014 aa7.37□□□□□ -1.23
FBXO28-201ENST00000366862 TENM2Q9NT68 2774 aa7.34□□□□□ -1.24
FBXO28-201ENST00000366862 TENM1Q9UKZ4 2725 aa7.32□□□□□ -1.24
FBXO28-201ENST00000366862 MXRA5Q9NR99 2828 aa7.32□□□□□ -1.24
FBXO28-201ENST00000366862 KRTAP3-2Q9BYR7 98 aa7.31□□□□□ -1.24
FBXO28-201ENST00000366862 SPTBN5Q9NRC6 3674 aaKnown RBP7.3□□□□□ -1.24
FBXO28-201ENST00000366862 SPEGQ15772 3267 aa7.3□□□□□ -1.24
FBXO28-201ENST00000366862 LOC400499M0QZD8 3231 aa7.26□□□□□ -1.25
FBXO28-201ENST00000366862 KRTAP3-3Q9BYR6 98 aa7.24□□□□□ -1.25
FBXO28-201ENST00000366862 PDZD2O15018 2839 aa7.2□□□□□ -1.26
FBXO28-201ENST00000366862 KRTAP23-1A1A580 65 aa7.08□□□□□ -1.28
FBXO28-201ENST00000366862 WDFY3Q8IZQ1 3526 aa7.03□□□□□ -1.28
FBXO28-201ENST00000366862 PKD1L1Q8TDX9 2849 aa7.02□□□□□ -1.29
FBXO28-201ENST00000366862 DCHS1Q96JQ0 3298 aa7□□□□□ -1.29
FBXO28-201ENST00000366862 MYO15AQ9UKN7 3530 aa6.97□□□□□ -1.29
FBXO28-201ENST00000366862 CSMD1Q96PZ7 3565 aa6.93□□□□□ -1.3
FBXO28-201ENST00000366862 RELNP78509 3460 aa6.89□□□□□ -1.31
FBXO28-201ENST00000366862 KRTAP10-12P60413 245 aa6.89□□□□□ -1.31
FBXO28-201ENST00000366862 FBN3Q75N90 2809 aa6.88□□□□□ -1.31
FBXO28-201ENST00000366862 MEGF8Q7Z7M0 2845 aa6.87□□□□□ -1.31
FBXO28-201ENST00000366862 VWFP04275 2813 aa6.84□□□□□ -1.31
FBXO28-201ENST00000366862 ZFHX4Q86UP3 3567 aa6.84□□□□□ -1.31
FBXO28-201ENST00000366862 MT1HL1P0DM35 61 aa6.83□□□□□ -1.32
FBXO28-201ENST00000366862 KRTAP12-3P60328 96 aa6.8□□□□□ -1.32
FBXO28-201ENST00000366862 ANK3Q12955 4377 aaKnown RBP6.78□□□□□ -1.32
FBXO28-201ENST00000366862 SRRM2Q9UQ35 2752 aaKnown RBP6.78□□□□□ -1.32
FBXO28-201ENST00000366862 KRTAP10-4P60372 401 aaPredicted RBP6.76□□□□□ -1.33
FBXO28-201ENST00000366862 ASPMQ8IZT6 3477 aa6.74□□□□□ -1.33
FBXO28-201ENST00000366862 LCE3AQ5TA76 89 aa6.73□□□□□ -1.33
FBXO28-201ENST00000366862 SMG1Q96Q15 3661 aaKnown RBP6.71□□□□□ -1.34
FBXO28-201ENST00000366862 FBN1P35555 2871 aaKnown RBP6.66□□□□□ -1.34
FBXO28-201ENST00000366862 ZFHX3Q15911 3703 aa6.65□□□□□ -1.34
FBXO28-201ENST00000366862 LORP23490 312 aaPredicted RBP6.64□□□□□ -1.35
FBXO28-201ENST00000366862 OTOGQ6ZRI0 2925 aa6.59□□□□□ -1.35
FBXO28-201ENST00000366862 LAMA5O15230 3695 aa6.56□□□□□ -1.36
FBXO28-201ENST00000366862 NBPF19A0A087WUL8 3843 aa6.54□□□□□ -1.36
FBXO28-201ENST00000366862 HUWE1Q7Z6Z7 4374 aaKnown RBP6.53□□□□□ -1.36
FBXO28-201ENST00000366862 COL7A1Q02388 2944 aa6.51□□□□□ -1.37
FBXO28-201ENST00000366862 SVEP1Q4LDE5 3571 aa6.5□□□□□ -1.37
FBXO28-201ENST00000366862 CRCT1Q9UGL9 99 aa6.48□□□□□ -1.37
FBXO28-201ENST00000366862 TRRAPQ9Y4A5 3859 aa6.41□□□□□ -1.38
FBXO28-201ENST00000366862 ALMS1Q8TCU4 4167 aa6.35□□□□□ -1.39
FBXO28-201ENST00000366862 DMDP11532 3685 aa6.35□□□□□ -1.39
FBXO28-201ENST00000366862 MUC3AQ02505 3323 aa6.3□□□□□ -1.4
FBXO28-201ENST00000366862 KRTAP10-5P60370 271 aa6.29□□□□□ -1.4
FBXO28-201ENST00000366862 CUBNO60494 3623 aa6.29□□□□□ -1.4
FBXO28-201ENST00000366862 SPENQ96T58 3664 aaKnown RBP6.29□□□□□ -1.4
FBXO28-201ENST00000366862 KRTAP4-5Q9BYR2 181 aa6.25□□□□□ -1.41
FBXO28-201ENST00000366862 DNAH2Q9P225 4427 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms