RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 J3QL48 77 aa13.98□□□□□ -0.17
SHARPIN-201ENST00000359551 NDUFB1O75438 58 aa13.97□□□□□ -0.17
SHARPIN-201ENST00000359551 HIST1H4AP62805 103 aaKnown RBP13.96□□□□□ -0.17
SHARPIN-201ENST00000359551 RETNLBQ9BQ08 111 aa13.95□□□□□ -0.18
SHARPIN-201ENST00000359551 A0A1B0GVX0 72 aa13.95□□□□□ -0.18
SHARPIN-201ENST00000359551 A0A087WVE0 104 aa13.9□□□□□ -0.18
SHARPIN-201ENST00000359551 IGHV6-1A0A0B4J1U7 121 aa13.88□□□□□ -0.19
SHARPIN-201ENST00000359551 FP248Q71RG6 208 aaPredicted RBP13.88□□□□□ -0.19
SHARPIN-201ENST00000359551 C8orf17Q9NRJ1 99 aa13.83□□□□□ -0.2
SHARPIN-201ENST00000359551 MMP24-AS1A0A0U1RRL7 71 aa13.82□□□□□ -0.2
SHARPIN-201ENST00000359551 C8orf87E5RJ46 101 aa13.82□□□□□ -0.2
SHARPIN-201ENST00000359551 NOTCH2NLQ7Z3S9 236 aa13.82□□□□□ -0.2
SHARPIN-201ENST00000359551 HCG22E2RYF7 251 aa13.81□□□□□ -0.2
SHARPIN-201ENST00000359551 LINC00313P59037 77 aa13.77□□□□□ -0.21
SHARPIN-201ENST00000359551 IGLV7-46A0A075B6I9 117 aa13.75□□□□□ -0.21
SHARPIN-201ENST00000359551 CASC2Q6XLA1 102 aa13.74□□□□□ -0.21
SHARPIN-201ENST00000359551 WFDC13Q8IUB5 93 aa13.74□□□□□ -0.21
SHARPIN-201ENST00000359551 FAM236AA0A1B0GUQ0 79 aa13.73□□□□□ -0.21
SHARPIN-201ENST00000359551 FAM236BA0A1B0GV22 79 aa13.73□□□□□ -0.21
SHARPIN-201ENST00000359551 hDV103S1A0JD37 113 aa13.72□□□□□ -0.21
SHARPIN-201ENST00000359551 KRTAP16-1A8MUX0 517 aa13.69□□□□□ -0.22
SHARPIN-201ENST00000359551 PRR4Q16378 134 aa13.69□□□□□ -0.22
SHARPIN-201ENST00000359551 TMEM254Q8TBM7 123 aa13.69□□□□□ -0.22
SHARPIN-201ENST00000359551 SCGB1A1P11684 91 aa13.67□□□□□ -0.22
SHARPIN-201ENST00000359551 MRPL34Q9BQ48 92 aaKnown RBP13.66□□□□□ -0.22
SHARPIN-201ENST00000359551 C9orf92A6NGG3 77 aa13.65□□□□□ -0.22
SHARPIN-201ENST00000359551 KRTAP13-3Q3SY46 172 aa13.65□□□□□ -0.22
SHARPIN-201ENST00000359551 HERC1Q15751 4861 aa13.64□□□□□ -0.23
SHARPIN-201ENST00000359551 TPRXLQ17RH7 258 aa13.59□□□□□ -0.23
SHARPIN-201ENST00000359551 Q8N9P0 234 aaPredicted RBP13.59□□□□□ -0.23
SHARPIN-201ENST00000359551 ATOX1O00244 68 aa13.57□□□□□ -0.24
SHARPIN-201ENST00000359551 OCR1Q9BZK8 76 aa13.53□□□□□ -0.24
SHARPIN-201ENST00000359551 C20orf166-AS1Q96NR2 134 aa13.52□□□□□ -0.25
SHARPIN-201ENST00000359551 A8MUU9 505 aa13.5□□□□□ -0.25
SHARPIN-201ENST00000359551 SMIM20Q8N5G0 67 aa13.49□□□□□ -0.25
SHARPIN-201ENST00000359551 NDUFS5O43920 106 aa13.48□□□□□ -0.25
SHARPIN-201ENST00000359551 XP32Q5T750 250 aa13.47□□□□□ -0.25
SHARPIN-201ENST00000359551 TP53AIP1Q9HCN2 124 aa13.47□□□□□ -0.25
SHARPIN-201ENST00000359551 Q75L30 129 aa13.44□□□□□ -0.26
SHARPIN-201ENST00000359551 TRAV7A0A075B6U4 112 aa13.44□□□□□ -0.26
SHARPIN-201ENST00000359551 UQCRQO14949 82 aa13.41□□□□□ -0.26
SHARPIN-201ENST00000359551 SERP2Q8N6R1 65 aa13.39□□□□□ -0.27
SHARPIN-201ENST00000359551 RPL37P61927 97 aaKnown RBP13.37□□□□□ -0.27
SHARPIN-201ENST00000359551 ANAPC13Q9BS18 74 aa13.37□□□□□ -0.27
SHARPIN-201ENST00000359551 LPAP08519 4548 aa13.37□□□□□ -0.27
SHARPIN-201ENST00000359551 Q5W150 140 aa13.33□□□□□ -0.28
SHARPIN-201ENST00000359551 TRAV22A0A0B4J277 110 aa13.31□□□□□ -0.28
SHARPIN-201ENST00000359551 ZCCHC13Q8WW36 166 aaKnown RBP13.31□□□□□ -0.28
SHARPIN-201ENST00000359551 C5orf47Q569G3 176 aa13.3□□□□□ -0.28
SHARPIN-201ENST00000359551 HMCN2Q8NDA2 5059 aa13.29□□□□□ -0.28
SHARPIN-201ENST00000359551 COX7CP15954 63 aa13.28□□□□□ -0.28
SHARPIN-201ENST00000359551 LRP2P98164 4655 aa13.25□□□□□ -0.29
SHARPIN-201ENST00000359551 H0Y9P7 68 aa13.25□□□□□ -0.29
SHARPIN-201ENST00000359551 ATP11AUNQ6ZP68 121 aa13.23□□□□□ -0.29
SHARPIN-201ENST00000359551 MP68P56378 58 aa13.22□□□□□ -0.29
SHARPIN-201ENST00000359551 H3BPC8 53 aa13.18□□□□□ -0.3
SHARPIN-201ENST00000359551 A0A0U1RQV1 116 aa13.14□□□□□ -0.31
SHARPIN-201ENST00000359551 C20orf197Q8N268 126 aa13.14□□□□□ -0.31
SHARPIN-201ENST00000359551 LINC00208Q96KT6 92 aa13.14□□□□□ -0.31
SHARPIN-201ENST00000359551 PCOTHQ58A44 107 aa13.12□□□□□ -0.31
SHARPIN-201ENST00000359551 PCP4P48539 62 aa13.12□□□□□ -0.31
SHARPIN-201ENST00000359551 C1orf64Q8NEQ6 169 aa13.12□□□□□ -0.31
SHARPIN-201ENST00000359551 LOC101927531A0A1B0GV80 90 aa13.1□□□□□ -0.31
SHARPIN-201ENST00000359551 CCDC179H3BU77 68 aa13.1□□□□□ -0.31
SHARPIN-201ENST00000359551 SEC61BP60468 96 aaKnown RBP13.1□□□□□ -0.31
SHARPIN-201ENST00000359551 IGKV2-30P06310 120 aa13.09□□□□□ -0.31
SHARPIN-201ENST00000359551 KLKP1Q107X0 134 aa13.08□□□□□ -0.31
SHARPIN-201ENST00000359551 SNURFQ9Y675 71 aa13.06□□□□□ -0.32
SHARPIN-201ENST00000359551 CYP4F30PQ9H0H9 118 aa13.03□□□□□ -0.32
SHARPIN-201ENST00000359551 MUC17Q685J3 4493 aa13.03□□□□□ -0.32
SHARPIN-201ENST00000359551 IGKV2D-30A0A075B6S6 120 aa13.02□□□□□ -0.33
SHARPIN-201ENST00000359551 C7orf65Q6ZTY9 151 aa13.02□□□□□ -0.33
SHARPIN-201ENST00000359551 SPINK7P58062 85 aa12.99□□□□□ -0.33
SHARPIN-201ENST00000359551 CYSTM1Q9H1C7 97 aa12.96□□□□□ -0.33
SHARPIN-201ENST00000359551 UBR4Q5T4S7 5183 aa12.9□□□□□ -0.34
SHARPIN-201ENST00000359551 NDUFC1O43677 76 aa12.89□□□□□ -0.35
SHARPIN-201ENST00000359551 H7BZZ5 65 aa12.86□□□□□ -0.35
SHARPIN-201ENST00000359551 KRTAP4-1Q9BYQ7 146 aa12.84□□□□□ -0.35
SHARPIN-201ENST00000359551 HRES1P13985 223 aa12.8□□□□□ -0.36
SHARPIN-201ENST00000359551 SPANXA2-OT1Q8N9U9 137 aa12.73□□□□□ -0.37
SHARPIN-201ENST00000359551 MPLKIPQ8TAP9 179 aa12.71□□□□□ -0.37
SHARPIN-201ENST00000359551 C4orf26Q17RF5 130 aa12.7□□□□□ -0.38
SHARPIN-201ENST00000359551 TMEM258P61165 79 aa12.65□□□□□ -0.38
SHARPIN-201ENST00000359551 COX6B2Q6YFQ2 88 aa12.64□□□□□ -0.39
SHARPIN-201ENST00000359551 RNF213Q63HN8 5207 aa12.6□□□□□ -0.39
SHARPIN-201ENST00000359551 KRTAP3-1Q9BYR8 98 aa12.58□□□□□ -0.4
SHARPIN-201ENST00000359551 RBM12B-AS1Q9P1G2 102 aa12.58□□□□□ -0.4
SHARPIN-201ENST00000359551 DMAC1Q96GE9 116 aa12.57□□□□□ -0.4
SHARPIN-201ENST00000359551 FAM236DA0A1B0GTK5 79 aa12.56□□□□□ -0.4
SHARPIN-201ENST00000359551 FAM236CP0DP71 79 aa12.56□□□□□ -0.4
SHARPIN-201ENST00000359551 ATP5EP56381 51 aaPredicted RBP12.55□□□□□ -0.4
SHARPIN-201ENST00000359551 A8MUN3 132 aa12.54□□□□□ -0.4
SHARPIN-201ENST00000359551 MUC2Q02817 5179 aa12.53□□□□□ -0.4
SHARPIN-201ENST00000359551 KRTAP19-2Q3LHN2 52 aa12.5□□□□□ -0.41
SHARPIN-201ENST00000359551 ACYP2P14621 99 aa12.44□□□□□ -0.42
SHARPIN-201ENST00000359551 H1FX-AS1Q4G0G2 97 aa12.4□□□□□ -0.42
SHARPIN-201ENST00000359551 COA5Q86WW8 74 aa12.31□□□□□ -0.44
SHARPIN-201ENST00000359551 LCE2CQ5TA81 110 aa12.3□□□□□ -0.44
SHARPIN-201ENST00000359551 SERP1Q9Y6X1 66 aa12.25□□□□□ -0.45
SHARPIN-201ENST00000359551 S4R3F8 94 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms