RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 LOC101927531A0A1B0GV80 90 aa6.65□□□□□ -1.35
SSU72-202ENST00000359060 C8orf87E5RJ46 101 aa6.65□□□□□ -1.35
SSU72-202ENST00000359060 SPANXA2-OT1Q8N9U9 137 aa6.65□□□□□ -1.35
SSU72-202ENST00000359060 A0A087X002 238 aa6.64□□□□□ -1.35
SSU72-202ENST00000359060 NOTCH2NLQ7Z3S9 236 aa6.64□□□□□ -1.35
SSU72-202ENST00000359060 LCE6AA0A183 80 aa6.63□□□□□ -1.35
SSU72-202ENST00000359060 FBN3Q75N90 2809 aa6.62□□□□□ -1.35
SSU72-202ENST00000359060 FAM229AH3BQW9 127 aa6.61□□□□□ -1.35
SSU72-202ENST00000359060 Q96NJ1 140 aa6.61□□□□□ -1.35
SSU72-202ENST00000359060 CD164Q04900 197 aa6.6□□□□□ -1.35
SSU72-202ENST00000359060 SPINK1P00995 79 aa6.59□□□□□ -1.35
SSU72-202ENST00000359060 ACYP2P14621 99 aa6.59□□□□□ -1.35
SSU72-202ENST00000359060 IGLV7-46A0A075B6I9 117 aa6.58□□□□□ -1.36
SSU72-202ENST00000359060 MEGF8Q7Z7M0 2845 aa6.58□□□□□ -1.36
SSU72-202ENST00000359060 Q1T7F1 81 aa6.56□□□□□ -1.36
SSU72-202ENST00000359060 Q8N9P0 234 aaPredicted RBP6.56□□□□□ -1.36
SSU72-202ENST00000359060 LINC00304Q8N9R0 145 aa6.56□□□□□ -1.36
SSU72-202ENST00000359060 PRR26Q8N8Z3 221 aa6.55□□□□□ -1.36
SSU72-202ENST00000359060 C7orf65Q6ZTY9 151 aa6.54□□□□□ -1.36
SSU72-202ENST00000359060 CMYA5Q8N3K9 4069 aa6.52□□□□□ -1.37
SSU72-202ENST00000359060 C9orf92A6NGG3 77 aa6.52□□□□□ -1.37
SSU72-202ENST00000359060 Q5W150 140 aa6.51□□□□□ -1.37
SSU72-202ENST00000359060 DNAH10Q8IVF4 4471 aa6.5□□□□□ -1.37
SSU72-202ENST00000359060 HRES1P13985 223 aa6.5□□□□□ -1.37
SSU72-202ENST00000359060 KRTAP13-2Q52LG2 175 aa6.49□□□□□ -1.37
SSU72-202ENST00000359060 DNAH9Q9NYC9 4486 aa6.48□□□□□ -1.37
SSU72-202ENST00000359060 A0A1B0GU69 56 aa6.48□□□□□ -1.37
SSU72-202ENST00000359060 Q5VV11 94 aa6.45□□□□□ -1.38
SSU72-202ENST00000359060 Q8N1X5 172 aa6.43□□□□□ -1.38
SSU72-202ENST00000359060 PLECQ15149 4684 aaKnown RBP6.43□□□□□ -1.38
SSU72-202ENST00000359060 Q6ZSA8 131 aa6.4□□□□□ -1.39
SSU72-202ENST00000359060 K7ERS5 55 aa6.39□□□□□ -1.39
SSU72-202ENST00000359060 DNAH7Q8WXX0 4024 aa6.39□□□□□ -1.39
SSU72-202ENST00000359060 ASB16-AS1Q495Z4 193 aa6.39□□□□□ -1.39
SSU72-202ENST00000359060 ATP11AUNQ6ZP68 121 aa6.38□□□□□ -1.39
SSU72-202ENST00000359060 H3BS24 57 aa6.37□□□□□ -1.39
SSU72-202ENST00000359060 LINC01558Q9Y6Z2 57 aa6.37□□□□□ -1.39
SSU72-202ENST00000359060 Q75L30 129 aa6.36□□□□□ -1.39
SSU72-202ENST00000359060 A8MU10 97 aa6.36□□□□□ -1.39
SSU72-202ENST00000359060 KRTAP1-4P0C5Y4 121 aa6.35□□□□□ -1.39
SSU72-202ENST00000359060 KTN1-AS1Q86SY8 53 aa6.34□□□□□ -1.39
SSU72-202ENST00000359060 DNAH3Q8TD57 4116 aa6.34□□□□□ -1.39
SSU72-202ENST00000359060 SPINK7P58062 85 aa6.33□□□□□ -1.4
SSU72-202ENST00000359060 RBM12B-AS1Q9P1G2 102 aa6.32□□□□□ -1.4
SSU72-202ENST00000359060 CDC42SE1Q9NRR8 79 aa6.32□□□□□ -1.4
SSU72-202ENST00000359060 DMAC1Q96GE9 116 aa6.32□□□□□ -1.4
SSU72-202ENST00000359060 STARD9Q9P2P6 4700 aa6.29□□□□□ -1.4
SSU72-202ENST00000359060 UQCR11O14957 56 aa6.29□□□□□ -1.4
SSU72-202ENST00000359060 DNAH1Q9P2D7 4330 aa6.29□□□□□ -1.4
SSU72-202ENST00000359060 PRKDCP78527 4128 aaKnown RBP6.28□□□□□ -1.4
SSU72-202ENST00000359060 MIR22HGQ0VDD5 57 aa6.26□□□□□ -1.41
SSU72-202ENST00000359060 LCA10Q71F78 164 aa6.26□□□□□ -1.41
SSU72-202ENST00000359060 PRAC1Q96KF2 57 aa6.26□□□□□ -1.41
SSU72-202ENST00000359060 KRTAP21-3Q3LHN1 58 aa6.24□□□□□ -1.41
SSU72-202ENST00000359060 VPS13DQ5THJ4 4388 aa6.22□□□□□ -1.41
SSU72-202ENST00000359060 DNHD1Q96M86 4753 aa6.22□□□□□ -1.41
SSU72-202ENST00000359060 KRTAP16-1A8MUX0 517 aa6.2□□□□□ -1.42
SSU72-202ENST00000359060 KRTAP13-3Q3SY46 172 aa6.19□□□□□ -1.42
SSU72-202ENST00000359060 Q5VSD8 79 aa6.19□□□□□ -1.42
SSU72-202ENST00000359060 DNAH11Q96DT5 4516 aa6.19□□□□□ -1.42
SSU72-202ENST00000359060 KMT2AQ03164 3969 aa6.19□□□□□ -1.42
SSU72-202ENST00000359060 SPINT4Q6UDR6 99 aa6.18□□□□□ -1.42
SSU72-202ENST00000359060 RPS29P62273 56 aaKnown RBP6.16□□□□□ -1.42
SSU72-202ENST00000359060 DNAH17Q9UFH2 4485 aa6.12□□□□□ -1.43
SSU72-202ENST00000359060 LINC01554Q52M75 96 aa6.09□□□□□ -1.43
SSU72-202ENST00000359060 DNAH8Q96JB1 4490 aa6.08□□□□□ -1.44
SSU72-202ENST00000359060 A0A1B0GU33 70 aa6.08□□□□□ -1.44
SSU72-202ENST00000359060 A8MUU9 505 aa6.07□□□□□ -1.44
SSU72-202ENST00000359060 A0A1B0GVY2 172 aa6.06□□□□□ -1.44
SSU72-202ENST00000359060 C20orf166-AS1Q96NR2 134 aa6.06□□□□□ -1.44
SSU72-202ENST00000359060 DNAH2Q9P225 4427 aa6.05□□□□□ -1.44
SSU72-202ENST00000359060 CRIPTQ9P021 101 aa6.05□□□□□ -1.44
SSU72-202ENST00000359060 FRAS1Q86XX4 4008 aa6.04□□□□□ -1.44
SSU72-202ENST00000359060 ADM2Q7Z4H4 148 aa6.04□□□□□ -1.44
SSU72-202ENST00000359060 COX6B2Q6YFQ2 88 aa6.03□□□□□ -1.44
SSU72-202ENST00000359060 DYNC2H1Q8NCM8 4307 aaKnown RBP6.03□□□□□ -1.44
SSU72-202ENST00000359060 LRP1BQ9NZR2 4599 aa6.03□□□□□ -1.44
SSU72-202ENST00000359060 A6NN06 94 aa6.03□□□□□ -1.44
SSU72-202ENST00000359060 A0A0D9SG42 100 aa6.02□□□□□ -1.45
SSU72-202ENST00000359060 CSAG1Q6PB30 78 aa6.02□□□□□ -1.45
SSU72-202ENST00000359060 SPATA8Q6RVD6 105 aa6.02□□□□□ -1.45
SSU72-202ENST00000359060 HECTD4Q9Y4D8 3996 aa6□□□□□ -1.45
SSU72-202ENST00000359060 DNAH5Q8TE73 4624 aa5.99□□□□□ -1.45
SSU72-202ENST00000359060 J3QL48 77 aa5.99□□□□□ -1.45
SSU72-202ENST00000359060 DNAH6Q9C0G6 4158 aa5.98□□□□□ -1.45
SSU72-202ENST00000359060 S4R3F8 94 aa5.95□□□□□ -1.46
SSU72-202ENST00000359060 H1FX-AS1Q4G0G2 97 aa5.94□□□□□ -1.46
SSU72-202ENST00000359060 FAT1Q14517 4588 aa5.93□□□□□ -1.46
SSU72-202ENST00000359060 RPL37P61927 97 aaKnown RBP5.92□□□□□ -1.46
SSU72-202ENST00000359060 ALMS1Q8TCU4 4167 aa5.9□□□□□ -1.47
SSU72-202ENST00000359060 FAT2Q9NYQ8 4349 aa5.89□□□□□ -1.47
SSU72-202ENST00000359060 XP32Q5T750 250 aa5.88□□□□□ -1.47
SSU72-202ENST00000359060 HYDINQ4G0P3 5121 aa5.88□□□□□ -1.47
SSU72-202ENST00000359060 KRTAP10-4P60372 401 aaPredicted RBP5.88□□□□□ -1.47
SSU72-202ENST00000359060 KRTAP10-8P60410 259 aa5.88□□□□□ -1.47
SSU72-202ENST00000359060 DYNC1H1Q14204 4646 aaKnown RBP5.87□□□□□ -1.47
SSU72-202ENST00000359060 VPS13BQ7Z7G8 4022 aa5.87□□□□□ -1.47
SSU72-202ENST00000359060 KRTAP3-1Q9BYR8 98 aa5.84□□□□□ -1.47
SSU72-202ENST00000359060 H0YAA0 97 aa5.81□□□□□ -1.48
SSU72-202ENST00000359060 PKHD1P08F94 4074 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms