RNA–Protein interactions for RNA: ENST00000357365.7

SDCCAG3-202, Transcript of Serologically defined colon cancer antigen 3, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SDCCAG3, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-202ENST00000357365 ASB16-AS1Q495Z4 193 aa16.52■□□□□ 0.24
SDCCAG3-202ENST00000357365 ZCCHC13Q8WW36 166 aaKnown RBP16.51■□□□□ 0.23
SDCCAG3-202ENST00000357365 OXTP01178 125 aa16.48■□□□□ 0.23
SDCCAG3-202ENST00000357365 RYR3Q15413 4870 aa16.47■□□□□ 0.23
SDCCAG3-202ENST00000357365 H0Y9P7 68 aa16.42■□□□□ 0.22
SDCCAG3-202ENST00000357365 TYMSOSQ8TAI1 123 aa16.42■□□□□ 0.22
SDCCAG3-202ENST00000357365 LINC00208Q96KT6 92 aa16.42■□□□□ 0.22
SDCCAG3-202ENST00000357365 RPS28P62857 69 aaKnown RBP16.41■□□□□ 0.22
SDCCAG3-202ENST00000357365 MP68P56378 58 aa16.4■□□□□ 0.22
SDCCAG3-202ENST00000357365 C1orf195Q5TG92 126 aa16.4■□□□□ 0.22
SDCCAG3-202ENST00000357365 KRTAP10-4P60372 401 aaPredicted RBP16.4■□□□□ 0.22
SDCCAG3-202ENST00000357365 PRR26Q8N8Z3 221 aa16.4■□□□□ 0.22
SDCCAG3-202ENST00000357365 NDUFS5O43920 106 aa16.37■□□□□ 0.21
SDCCAG3-202ENST00000357365 MRPL34Q9BQ48 92 aaKnown RBP16.37■□□□□ 0.21
SDCCAG3-202ENST00000357365 Q5XG85 94 aa16.35■□□□□ 0.21
SDCCAG3-202ENST00000357365 TRAV22A0A0B4J277 110 aa16.32■□□□□ 0.2
SDCCAG3-202ENST00000357365 C4orf48Q5BLP8 95 aa16.28■□□□□ 0.2
SDCCAG3-202ENST00000357365 C1orf64Q8NEQ6 169 aa16.27■□□□□ 0.2
SDCCAG3-202ENST00000357365 TP53AIP1Q9HCN2 124 aa16.27■□□□□ 0.19
SDCCAG3-202ENST00000357365 SERP1Q9Y6X1 66 aa16.27■□□□□ 0.19
SDCCAG3-202ENST00000357365 LIMD2Q9BT23 127 aa16.26■□□□□ 0.19
SDCCAG3-202ENST00000357365 ATP5EP56381 51 aaPredicted RBP16.25■□□□□ 0.19
SDCCAG3-202ENST00000357365 PRR4Q16378 134 aa16.23■□□□□ 0.19
SDCCAG3-202ENST00000357365 PKHD1L1Q86WI1 4243 aa16.21■□□□□ 0.19
SDCCAG3-202ENST00000357365 H3BPC8 53 aa16.21■□□□□ 0.19
SDCCAG3-202ENST00000357365 SPINK1P00995 79 aa16.21■□□□□ 0.19
SDCCAG3-202ENST00000357365 LINC00304Q8N9R0 145 aa16.2■□□□□ 0.18
SDCCAG3-202ENST00000357365 LINC00313P59037 77 aa16.19■□□□□ 0.18
SDCCAG3-202ENST00000357365 C8orf87E5RJ46 101 aa16.19■□□□□ 0.18
SDCCAG3-202ENST00000357365 HSPG2P98160 4391 aa16.17■□□□□ 0.18
SDCCAG3-202ENST00000357365 Q5W150 140 aa16.15■□□□□ 0.18
SDCCAG3-202ENST00000357365 PCOTHQ58A44 107 aa16.07■□□□□ 0.16
SDCCAG3-202ENST00000357365 KRTAP16-1A8MUX0 517 aa16.07■□□□□ 0.16
SDCCAG3-202ENST00000357365 LRP1Q07954 4544 aaKnown RBP16.05■□□□□ 0.16
SDCCAG3-202ENST00000357365 KRTAP13-3Q3SY46 172 aa16.05■□□□□ 0.16
SDCCAG3-202ENST00000357365 RYR1P21817 5038 aa16.04■□□□□ 0.16
SDCCAG3-202ENST00000357365 SPAG11AQ6PDA7 123 aa16.02■□□□□ 0.16
SDCCAG3-202ENST00000357365 Q8N9P0 234 aaPredicted RBP16.02■□□□□ 0.16
SDCCAG3-202ENST00000357365 RETNLBQ9BQ08 111 aa16.01■□□□□ 0.15
SDCCAG3-202ENST00000357365 CYP4F30PQ9H0H9 118 aa16■□□□□ 0.15
SDCCAG3-202ENST00000357365 RPS29P62273 56 aaKnown RBP15.99■□□□□ 0.15
SDCCAG3-202ENST00000357365 FAM229AH3BQW9 127 aa15.96■□□□□ 0.15
SDCCAG3-202ENST00000357365 SPANXA2-OT1Q8N9U9 137 aa15.96■□□□□ 0.15
SDCCAG3-202ENST00000357365 FP248Q71RG6 208 aaPredicted RBP15.95■□□□□ 0.14
SDCCAG3-202ENST00000357365 KRTAP17-1Q9BYP8 105 aa15.95■□□□□ 0.14
SDCCAG3-202ENST00000357365 KIAA1109Q2LD37 5005 aa15.95■□□□□ 0.14
SDCCAG3-202ENST00000357365 Q5VSD8 79 aa15.93■□□□□ 0.14
SDCCAG3-202ENST00000357365 TNXBP22105 4242 aa15.91■□□□□ 0.14
SDCCAG3-202ENST00000357365 SMIM26A0A096LP01 95 aa15.9■□□□□ 0.14
SDCCAG3-202ENST00000357365 C4orf26Q17RF5 130 aa15.89■□□□□ 0.13
SDCCAG3-202ENST00000357365 EPPK1P58107 5090 aaKnown RBP15.89■□□□□ 0.13
SDCCAG3-202ENST00000357365 FLG2Q5D862 2391 aaPredicted RBP15.87■□□□□ 0.13
SDCCAG3-202ENST00000357365 IGLV7-46A0A075B6I9 117 aa15.86■□□□□ 0.13
SDCCAG3-202ENST00000357365 LOC101927531A0A1B0GV80 90 aa15.86■□□□□ 0.13
SDCCAG3-202ENST00000357365 Q8N1X5 172 aa15.78■□□□□ 0.12
SDCCAG3-202ENST00000357365 MPLKIPQ8TAP9 179 aa15.77■□□□□ 0.12
SDCCAG3-202ENST00000357365 C9orf92A6NGG3 77 aa15.77■□□□□ 0.11
SDCCAG3-202ENST00000357365 FAT3Q8TDW7 4589 aa15.76■□□□□ 0.11
SDCCAG3-202ENST00000357365 MYCBP2O75592 4640 aa15.7■□□□□ 0.1
SDCCAG3-202ENST00000357365 IGKV2-30P06310 120 aa15.7■□□□□ 0.1
SDCCAG3-202ENST00000357365 KRTAP10-8P60410 259 aa15.69■□□□□ 0.1
SDCCAG3-202ENST00000357365 DMBT1Q9UGM3 2413 aaPredicted RBP15.66■□□□□ 0.1
SDCCAG3-202ENST00000357365 COA5Q86WW8 74 aa15.65■□□□□ 0.1
SDCCAG3-202ENST00000357365 HRES1P13985 223 aa15.64■□□□□ 0.09
SDCCAG3-202ENST00000357365 IGKV2D-30A0A075B6S6 120 aa15.63■□□□□ 0.09
SDCCAG3-202ENST00000357365 C20orf166-AS1Q96NR2 134 aa15.51■□□□□ 0.07
SDCCAG3-202ENST00000357365 A8MUU9 505 aa15.51■□□□□ 0.07
SDCCAG3-202ENST00000357365 Q1T7F1 81 aa15.49■□□□□ 0.07
SDCCAG3-202ENST00000357365 MT1HL1P0DM35 61 aa15.43■□□□□ 0.06
SDCCAG3-202ENST00000357365 DMAC1Q96GE9 116 aa15.42■□□□□ 0.06
SDCCAG3-202ENST00000357365 PSPHP1O15172 72 aa15.39■□□□□ 0.05
SDCCAG3-202ENST00000357365 C7orf65Q6ZTY9 151 aa15.37■□□□□ 0.05
SDCCAG3-202ENST00000357365 ACYP2P14621 99 aa15.35■□□□□ 0.05
SDCCAG3-202ENST00000357365 KRTAP4-5Q9BYR2 181 aa15.31■□□□□ 0.04
SDCCAG3-202ENST00000357365 A8MUN3 132 aa15.3■□□□□ 0.04
SDCCAG3-202ENST00000357365 Q75L30 129 aa15.27■□□□□ 0.03
SDCCAG3-202ENST00000357365 V9GYY9 64 aa15.25■□□□□ 0.03
SDCCAG3-202ENST00000357365 PRR15LQ9BU68 103 aa15.18■□□□□ 0.02
SDCCAG3-202ENST00000357365 CHKB-CPT1BH3BT56 60 aa15.18■□□□□ 0.02
SDCCAG3-202ENST00000357365 SPINK7P58062 85 aa15.17■□□□□ 0.02
SDCCAG3-202ENST00000357365 Q5VV11 94 aa15.17■□□□□ 0.02
SDCCAG3-202ENST00000357365 ABCA13Q86UQ4 5058 aa15.12■□□□□ 0.01
SDCCAG3-202ENST00000357365 XP32Q5T750 250 aa15.12■□□□□ 0.01
SDCCAG3-202ENST00000357365 BRK1Q8WUW1 75 aa15.1■□□□□ 0.01
SDCCAG3-202ENST00000357365 LINC01558Q9Y6Z2 57 aa15.1■□□□□ 0.01
SDCCAG3-202ENST00000357365 RPL37P61927 97 aaKnown RBP15.05■□□□□ 0
SDCCAG3-202ENST00000357365 ATP11AUNQ6ZP68 121 aa15.05■□□□□ -0
SDCCAG3-202ENST00000357365 KRTAP3-1Q9BYR8 98 aa15.03■□□□□ -0
SDCCAG3-202ENST00000357365 LRP2P98164 4655 aa14.96□□□□□ -0.02
SDCCAG3-202ENST00000357365 LPAP08519 4548 aa14.95□□□□□ -0.02
SDCCAG3-202ENST00000357365 HERC2O95714 4834 aa14.92□□□□□ -0.02
SDCCAG3-202ENST00000357365 PRO0628Q9UI54 55 aa14.9□□□□□ -0.02
SDCCAG3-202ENST00000357365 A8MU10 97 aa14.89□□□□□ -0.03
SDCCAG3-202ENST00000357365 BIRC6Q9NR09 4857 aa14.86□□□□□ -0.03
SDCCAG3-202ENST00000357365 SVIPQ8NHG7 77 aa14.86□□□□□ -0.03
SDCCAG3-202ENST00000357365 COX6B2Q6YFQ2 88 aa14.8□□□□□ -0.04
SDCCAG3-202ENST00000357365 A6NED7 52 aa14.8□□□□□ -0.04
SDCCAG3-202ENST00000357365 TPRXLQ17RH7 258 aa14.78□□□□□ -0.04
SDCCAG3-202ENST00000357365 A0A1B0GU69 56 aa14.74□□□□□ -0.05
SDCCAG3-202ENST00000357365 LCA10Q71F78 164 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms