RNA–Protein interactions for RNA: ENST00000357248.8

SMARCA2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMARCA2, Length 5,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-204ENST00000357248 ATRQ13535 2644 aa8.07□□□□□ -1.12
SMARCA2-204ENST00000357248 CHD6Q8TD26 2715 aa8.07□□□□□ -1.12
SMARCA2-204ENST00000357248 ZANQ9Y493 2812 aa8.05□□□□□ -1.12
SMARCA2-204ENST00000357248 CSMD1Q96PZ7 3565 aa8.05□□□□□ -1.12
SMARCA2-204ENST00000357248 FBN2P35556 2912 aa8.05□□□□□ -1.12
SMARCA2-204ENST00000357248 APCP25054 2843 aa8.03□□□□□ -1.12
SMARCA2-204ENST00000357248 MAST4O15021 2626 aa8.03□□□□□ -1.12
SMARCA2-204ENST00000357248 MXRA5Q9NR99 2828 aa8.01□□□□□ -1.13
SMARCA2-204ENST00000357248 A8MUU9 505 aa8.01□□□□□ -1.13
SMARCA2-204ENST00000357248 STAB1Q9NY15 2570 aa8□□□□□ -1.13
SMARCA2-204ENST00000357248 A0A087X002 238 aa7.96□□□□□ -1.13
SMARCA2-204ENST00000357248 UNC79Q9P2D8 2635 aa7.95□□□□□ -1.14
SMARCA2-204ENST00000357248 CELSR1Q9NYQ6 3014 aa7.95□□□□□ -1.14
SMARCA2-204ENST00000357248 KRTAP25-1Q3LHN0 102 aa7.94□□□□□ -1.14
SMARCA2-204ENST00000357248 SVEP1Q4LDE5 3571 aa7.94□□□□□ -1.14
SMARCA2-204ENST00000357248 KRTAP29-1A8MX34 341 aaPredicted RBP7.94□□□□□ -1.14
SMARCA2-204ENST00000357248 CRYBG3Q68DQ2 2970 aa7.93□□□□□ -1.14
SMARCA2-204ENST00000357248 CELSR2Q9HCU4 2923 aa7.91□□□□□ -1.14
SMARCA2-204ENST00000357248 DMBT1Q9UGM3 2413 aaPredicted RBP7.91□□□□□ -1.14
SMARCA2-204ENST00000357248 A8MU10 97 aa7.91□□□□□ -1.14
SMARCA2-204ENST00000357248 SETXQ7Z333 2677 aaKnown RBP7.89□□□□□ -1.15
SMARCA2-204ENST00000357248 TNP1P09430 55 aa7.89□□□□□ -1.15
SMARCA2-204ENST00000357248 RPS29P62273 56 aaKnown RBP7.88□□□□□ -1.15
SMARCA2-204ENST00000357248 KRTAP4-16G5E9R7 235 aaPredicted RBP7.88□□□□□ -1.15
SMARCA2-204ENST00000357248 HELZ2Q9BYK8 2649 aaKnown RBP7.86□□□□□ -1.15
SMARCA2-204ENST00000357248 NOTCH2NLQ7Z3S9 236 aa7.85□□□□□ -1.15
SMARCA2-204ENST00000357248 PDZD2O15018 2839 aa7.84□□□□□ -1.15
SMARCA2-204ENST00000357248 NDUFAF8A1L188 74 aa7.83□□□□□ -1.16
SMARCA2-204ENST00000357248 C10orf95Q9H7T3 257 aa7.83□□□□□ -1.16
SMARCA2-204ENST00000357248 ANK3Q12955 4377 aaKnown RBP7.81□□□□□ -1.16
SMARCA2-204ENST00000357248 GCN1Q92616 2671 aaKnown RBP7.8□□□□□ -1.16
SMARCA2-204ENST00000357248 VPS13CQ709C8 3753 aa7.8□□□□□ -1.16
SMARCA2-204ENST00000357248 ITPR2Q14571 2701 aa7.79□□□□□ -1.16
SMARCA2-204ENST00000357248 NF1P21359 2839 aa7.77□□□□□ -1.16
SMARCA2-204ENST00000357248 ZFHX3Q15911 3703 aa7.76□□□□□ -1.17
SMARCA2-204ENST00000357248 A6NN06 94 aa7.75□□□□□ -1.17
SMARCA2-204ENST00000357248 NBEAL1Q6ZS30 2694 aa7.75□□□□□ -1.17
SMARCA2-204ENST00000357248 KMT2BQ9UMN6 2715 aaPredicted RBP7.73□□□□□ -1.17
SMARCA2-204ENST00000357248 STAB2Q8WWQ8 2551 aa7.73□□□□□ -1.17
SMARCA2-204ENST00000357248 NSD1Q96L73 2696 aaPredicted RBP7.73□□□□□ -1.17
SMARCA2-204ENST00000357248 TENM4Q6N022 2769 aa7.72□□□□□ -1.17
SMARCA2-204ENST00000357248 TEP1Q99973 2627 aaKnown RBP7.71□□□□□ -1.17
SMARCA2-204ENST00000357248 AKAP9Q99996 3911 aa7.71□□□□□ -1.18
SMARCA2-204ENST00000357248 CSMD2Q7Z408 3487 aa7.69□□□□□ -1.18
SMARCA2-204ENST00000357248 NBEAL2Q6ZNJ1 2754 aa7.69□□□□□ -1.18
SMARCA2-204ENST00000357248 KRTAP11-1Q8IUC1 163 aa7.66□□□□□ -1.18
SMARCA2-204ENST00000357248 KRTAP13-2Q52LG2 175 aa7.65□□□□□ -1.18
SMARCA2-204ENST00000357248 KRTAP10-8P60410 259 aa7.64□□□□□ -1.19
SMARCA2-204ENST00000357248 Q6ZRN7 208 aaPredicted RBP7.62□□□□□ -1.19
SMARCA2-204ENST00000357248 PP632Q6XCG6 107 aa7.6□□□□□ -1.19
SMARCA2-204ENST00000357248 HIVEP1P15822 2718 aa7.6□□□□□ -1.19
SMARCA2-204ENST00000357248 ZNF469Q96JG9 3925 aaPredicted RBP7.57□□□□□ -1.2
SMARCA2-204ENST00000357248 NIPBLQ6KC79 2804 aaeCLIP7.55□□□□□ -1.2
SMARCA2-204ENST00000357248 NBPF19A0A087WUL8 3843 aa7.53□□□□□ -1.2
SMARCA2-204ENST00000357248 KRTAP7-1Q8IUC3 87 aa7.52□□□□□ -1.2
SMARCA2-204ENST00000357248 KRTAP13-1Q8IUC0 172 aa7.51□□□□□ -1.21
SMARCA2-204ENST00000357248 OTOGQ6ZRI0 2925 aa7.51□□□□□ -1.21
SMARCA2-204ENST00000357248 A0A1B0GVY2 172 aa7.49□□□□□ -1.21
SMARCA2-204ENST00000357248 VWFP04275 2813 aa7.47□□□□□ -1.21
SMARCA2-204ENST00000357248 TENM1Q9UKZ4 2725 aa7.47□□□□□ -1.21
SMARCA2-204ENST00000357248 PRO2289Q9P1D8 64 aa7.42□□□□□ -1.22
SMARCA2-204ENST00000357248 NOTCH1P46531 2555 aa7.42□□□□□ -1.22
SMARCA2-204ENST00000357248 KRTAP10-10P60014 251 aa7.38□□□□□ -1.23
SMARCA2-204ENST00000357248 CUBNO60494 3623 aa7.36□□□□□ -1.23
SMARCA2-204ENST00000357248 XP32Q5T750 250 aa7.36□□□□□ -1.23
SMARCA2-204ENST00000357248 P0C880 135 aa7.35□□□□□ -1.23
SMARCA2-204ENST00000357248 COL6A5A8TX70 2615 aa7.34□□□□□ -1.23
SMARCA2-204ENST00000357248 TENM3Q9P273 2699 aa7.33□□□□□ -1.24
SMARCA2-204ENST00000357248 KRTAP21-3Q3LHN1 58 aa7.26□□□□□ -1.25
SMARCA2-204ENST00000357248 TRRAPQ9Y4A5 3859 aa7.26□□□□□ -1.25
SMARCA2-204ENST00000357248 BAHCC1Q9P281 2608 aa7.24□□□□□ -1.25
SMARCA2-204ENST00000357248 TPRXLQ17RH7 258 aa7.22□□□□□ -1.25
SMARCA2-204ENST00000357248 H0YAA0 97 aa7.2□□□□□ -1.26
SMARCA2-204ENST00000357248 KRTAP1-4P0C5Y4 121 aa7.16□□□□□ -1.26
SMARCA2-204ENST00000357248 DNAH3Q8TD57 4116 aa7.15□□□□□ -1.26
SMARCA2-204ENST00000357248 HUWE1Q7Z6Z7 4374 aaKnown RBP7.15□□□□□ -1.27
SMARCA2-204ENST00000357248 FBN1P35555 2871 aaKnown RBP7.14□□□□□ -1.27
SMARCA2-204ENST00000357248 PKD1L1Q8TDX9 2849 aa7.12□□□□□ -1.27
SMARCA2-204ENST00000357248 CMYA5Q8N3K9 4069 aa7.05□□□□□ -1.28
SMARCA2-204ENST00000357248 DNAH1Q9P2D7 4330 aa7.02□□□□□ -1.28
SMARCA2-204ENST00000357248 KRTAP13-3Q3SY46 172 aa7.02□□□□□ -1.29
SMARCA2-204ENST00000357248 DNAH9Q9NYC9 4486 aa6.96□□□□□ -1.29
SMARCA2-204ENST00000357248 DYNC2H1Q8NCM8 4307 aaKnown RBP6.93□□□□□ -1.3
SMARCA2-204ENST00000357248 ANK2Q01484 3957 aa6.92□□□□□ -1.3
SMARCA2-204ENST00000357248 KRTAP12-2P59991 146 aa6.89□□□□□ -1.31
SMARCA2-204ENST00000357248 KRTAP13-4Q3LI77 160 aa6.83□□□□□ -1.32
SMARCA2-204ENST00000357248 VPS13DQ5THJ4 4388 aa6.82□□□□□ -1.32
SMARCA2-204ENST00000357248 PLECQ15149 4684 aaKnown RBP6.8□□□□□ -1.32
SMARCA2-204ENST00000357248 DNAH10Q8IVF4 4471 aa6.79□□□□□ -1.32
SMARCA2-204ENST00000357248 KRTAP15-1Q3LI76 137 aa6.76□□□□□ -1.33
SMARCA2-204ENST00000357248 DNAH17Q9UFH2 4485 aa6.75□□□□□ -1.33
SMARCA2-204ENST00000357248 TENM2Q9NT68 2774 aa6.73□□□□□ -1.33
SMARCA2-204ENST00000357248 COL7A1Q02388 2944 aa6.7□□□□□ -1.34
SMARCA2-204ENST00000357248 SRRM2Q9UQ35 2752 aaKnown RBP6.69□□□□□ -1.34
SMARCA2-204ENST00000357248 ALMS1Q8TCU4 4167 aa6.66□□□□□ -1.34
SMARCA2-204ENST00000357248 KRTAP12-1P59990 96 aa6.65□□□□□ -1.35
SMARCA2-204ENST00000357248 STARD9Q9P2P6 4700 aa6.64□□□□□ -1.35
SMARCA2-204ENST00000357248 DNAH6Q9C0G6 4158 aa6.63□□□□□ -1.35
SMARCA2-204ENST00000357248 DNAH7Q8WXX0 4024 aa6.62□□□□□ -1.35
SMARCA2-204ENST00000357248 TGP01266 2768 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 687.1 ms