RNA–Protein interactions for RNA: ENST00000356770.8

PBRM1-203, Transcript of polybromo 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PBRM1, Length 7,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-203ENST00000356770 H0YAA0 97 aa4.34□□□□□ -1.71
PBRM1-203ENST00000356770 ASH1LQ9NR48 2969 aaKnown RBP4.34□□□□□ -1.72
PBRM1-203ENST00000356770 TPRXLQ17RH7 258 aa4.31□□□□□ -1.72
PBRM1-203ENST00000356770 LAMA3Q16787 3333 aa4.3□□□□□ -1.72
PBRM1-203ENST00000356770 HTTP42858 3142 aa4.29□□□□□ -1.72
PBRM1-203ENST00000356770 DMXL2Q8TDJ6 3036 aa4.29□□□□□ -1.72
PBRM1-203ENST00000356770 COL12A1Q99715 3063 aa4.29□□□□□ -1.72
PBRM1-203ENST00000356770 DNAH14Q0VDD8 3507 aa4.28□□□□□ -1.72
PBRM1-203ENST00000356770 CFAP47Q6ZTR5 3102 aa4.27□□□□□ -1.73
PBRM1-203ENST00000356770 CHD7Q9P2D1 2997 aa4.27□□□□□ -1.73
PBRM1-203ENST00000356770 BRCA2P51587 3418 aa4.27□□□□□ -1.73
PBRM1-203ENST00000356770 SPEGQ15772 3267 aa4.27□□□□□ -1.73
PBRM1-203ENST00000356770 LAMA1P25391 3075 aa4.25□□□□□ -1.73
PBRM1-203ENST00000356770 ITPR1Q14643 2758 aa4.25□□□□□ -1.73
PBRM1-203ENST00000356770 FRYLO94915 3013 aa4.25□□□□□ -1.73
PBRM1-203ENST00000356770 COL6A3P12111 3177 aa4.25□□□□□ -1.73
PBRM1-203ENST00000356770 LRBAP50851 2863 aa4.24□□□□□ -1.73
PBRM1-203ENST00000356770 KRTAP12-2P59991 146 aa4.24□□□□□ -1.73
PBRM1-203ENST00000356770 VCANP13611 3396 aa4.21□□□□□ -1.74
PBRM1-203ENST00000356770 HIVEP1P15822 2718 aa4.2□□□□□ -1.74
PBRM1-203ENST00000356770 ATMQ13315 3056 aa4.19□□□□□ -1.74
PBRM1-203ENST00000356770 CHD9Q3L8U1 2897 aa4.19□□□□□ -1.74
PBRM1-203ENST00000356770 TENM1Q9UKZ4 2725 aa4.19□□□□□ -1.74
PBRM1-203ENST00000356770 KRTAP1-4P0C5Y4 121 aa4.18□□□□□ -1.74
PBRM1-203ENST00000356770 KRTAP15-1Q3LI76 137 aa4.16□□□□□ -1.74
PBRM1-203ENST00000356770 KRTAP13-3Q3SY46 172 aa4.16□□□□□ -1.74
PBRM1-203ENST00000356770 TENM3Q9P273 2699 aa4.15□□□□□ -1.74
PBRM1-203ENST00000356770 USP34Q70CQ2 3546 aa4.15□□□□□ -1.75
PBRM1-203ENST00000356770 BOD1L1Q8NFC6 3051 aa4.14□□□□□ -1.75
PBRM1-203ENST00000356770 ZZEF1O43149 2961 aa4.14□□□□□ -1.75
PBRM1-203ENST00000356770 CDH23Q9H251 3354 aa4.13□□□□□ -1.75
PBRM1-203ENST00000356770 KRTAP13-4Q3LI77 160 aa4.11□□□□□ -1.75
PBRM1-203ENST00000356770 TNRC18O15417 2968 aaPredicted RBP4.09□□□□□ -1.76
PBRM1-203ENST00000356770 ADGRG4Q8IZF6 3080 aa4.09□□□□□ -1.76
PBRM1-203ENST00000356770 CELSR2Q9HCU4 2923 aa4.09□□□□□ -1.76
PBRM1-203ENST00000356770 SZT2Q5T011 3432 aa4.09□□□□□ -1.76
PBRM1-203ENST00000356770 FLNCQ14315 2725 aa4.08□□□□□ -1.76
PBRM1-203ENST00000356770 CRCT1Q9UGL9 99 aa4.08□□□□□ -1.76
PBRM1-203ENST00000356770 ZFHX4Q86UP3 3567 aa4.08□□□□□ -1.76
PBRM1-203ENST00000356770 CELSR1Q9NYQ6 3014 aa4.07□□□□□ -1.76
PBRM1-203ENST00000356770 TACC2O95359 2948 aa4.07□□□□□ -1.76
PBRM1-203ENST00000356770 TGP01266 2768 aa4.07□□□□□ -1.76
PBRM1-203ENST00000356770 NF1P21359 2839 aa4.06□□□□□ -1.76
PBRM1-203ENST00000356770 NBPF19A0A087WUL8 3843 aa4.05□□□□□ -1.76
PBRM1-203ENST00000356770 PDZD2O15018 2839 aa4.03□□□□□ -1.76
PBRM1-203ENST00000356770 DMXL1Q9Y485 3027 aa3.99□□□□□ -1.77
PBRM1-203ENST00000356770 ASPMQ8IZT6 3477 aa3.99□□□□□ -1.77
PBRM1-203ENST00000356770 NIPBLQ6KC79 2804 aaeCLIP3.99□□□□□ -1.77
PBRM1-203ENST00000356770 KRTAP12-1P59990 96 aa3.98□□□□□ -1.77
PBRM1-203ENST00000356770 TENM4Q6N022 2769 aa3.98□□□□□ -1.77
PBRM1-203ENST00000356770 LOC400499M0QZD8 3231 aa3.98□□□□□ -1.77
PBRM1-203ENST00000356770 DCHS2Q6V1P9 2916 aa3.97□□□□□ -1.77
PBRM1-203ENST00000356770 INE1O15225 51 aa3.93□□□□□ -1.78
PBRM1-203ENST00000356770 ZANQ9Y493 2812 aa3.92□□□□□ -1.78
PBRM1-203ENST00000356770 DCHS1Q96JQ0 3298 aa3.9□□□□□ -1.79
PBRM1-203ENST00000356770 SPTBN5Q9NRC6 3674 aaKnown RBP3.9□□□□□ -1.79
PBRM1-203ENST00000356770 NBEAQ8NFP9 2946 aa3.89□□□□□ -1.79
PBRM1-203ENST00000356770 VWFP04275 2813 aa3.89□□□□□ -1.79
PBRM1-203ENST00000356770 PKD1L1Q8TDX9 2849 aa3.88□□□□□ -1.79
PBRM1-203ENST00000356770 EYSQ5T1H1 3165 aa3.87□□□□□ -1.79
PBRM1-203ENST00000356770 TENM2Q9NT68 2774 aa3.86□□□□□ -1.79
PBRM1-203ENST00000356770 WDFY3Q8IZQ1 3526 aa3.86□□□□□ -1.79
PBRM1-203ENST00000356770 MYO15AQ9UKN7 3530 aa3.85□□□□□ -1.79
PBRM1-203ENST00000356770 KRTAP10-12P60413 245 aa3.84□□□□□ -1.79
PBRM1-203ENST00000356770 LAMA5O15230 3695 aa3.81□□□□□ -1.8
PBRM1-203ENST00000356770 FBN2P35556 2912 aa3.8□□□□□ -1.8
PBRM1-203ENST00000356770 KRTAP10-6P60371 365 aaPredicted RBP3.78□□□□□ -1.81
PBRM1-203ENST00000356770 SRRM2Q9UQ35 2752 aaKnown RBP3.74□□□□□ -1.81
PBRM1-203ENST00000356770 SPENQ96T58 3664 aaKnown RBP3.73□□□□□ -1.81
PBRM1-203ENST00000356770 CSMD1Q96PZ7 3565 aa3.73□□□□□ -1.81
PBRM1-203ENST00000356770 KRTAP10-5P60370 271 aa3.73□□□□□ -1.81
PBRM1-203ENST00000356770 KRTAP3-1Q9BYR8 98 aa3.72□□□□□ -1.81
PBRM1-203ENST00000356770 COL7A1Q02388 2944 aa3.7□□□□□ -1.82
PBRM1-203ENST00000356770 MXRA5Q9NR99 2828 aa3.7□□□□□ -1.82
PBRM1-203ENST00000356770 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
PBRM1-203ENST00000356770 MEGF8Q7Z7M0 2845 aa3.69□□□□□ -1.82
PBRM1-203ENST00000356770 RELNP78509 3460 aa3.68□□□□□ -1.82
PBRM1-203ENST00000356770 ZFHX3Q15911 3703 aa3.68□□□□□ -1.82
PBRM1-203ENST00000356770 LORP23490 312 aaPredicted RBP3.66□□□□□ -1.82
PBRM1-203ENST00000356770 SMG1Q96Q15 3661 aaKnown RBP3.63□□□□□ -1.83
PBRM1-203ENST00000356770 HRNRQ86YZ3 2850 aaPredicted RBP3.61□□□□□ -1.83
PBRM1-203ENST00000356770 KRTAP8-1Q8IUC2 63 aa3.61□□□□□ -1.83
PBRM1-203ENST00000356770 LCE3AQ5TA76 89 aa3.61□□□□□ -1.83
PBRM1-203ENST00000356770 DMDP11532 3685 aa3.56□□□□□ -1.84
PBRM1-203ENST00000356770 MUC3AQ02505 3323 aa3.54□□□□□ -1.84
PBRM1-203ENST00000356770 KRTAP4-5Q9BYR2 181 aa3.53□□□□□ -1.84
PBRM1-203ENST00000356770 FBN3Q75N90 2809 aa3.53□□□□□ -1.84
PBRM1-203ENST00000356770 KRTAP23-1A1A580 65 aa3.49□□□□□ -1.85
PBRM1-203ENST00000356770 CUBNO60494 3623 aa3.48□□□□□ -1.85
PBRM1-203ENST00000356770 MT1HL1P0DM35 61 aa3.48□□□□□ -1.85
PBRM1-203ENST00000356770 ALMS1Q8TCU4 4167 aa3.47□□□□□ -1.85
PBRM1-203ENST00000356770 KRTAP3-3Q9BYR6 98 aa3.46□□□□□ -1.85
PBRM1-203ENST00000356770 KRTAP3-2Q9BYR7 98 aa3.46□□□□□ -1.86
PBRM1-203ENST00000356770 CSMD3Q7Z407 3707 aa3.44□□□□□ -1.86
PBRM1-203ENST00000356770 TRRAPQ9Y4A5 3859 aa3.43□□□□□ -1.86
PBRM1-203ENST00000356770 OTOGQ6ZRI0 2925 aa3.43□□□□□ -1.86
PBRM1-203ENST00000356770 KRTAP10-7P60409 375 aaPredicted RBP3.41□□□□□ -1.86
PBRM1-203ENST00000356770 SVEP1Q4LDE5 3571 aa3.41□□□□□ -1.86
PBRM1-203ENST00000356770 VPS13CQ709C8 3753 aa3.4□□□□□ -1.87
PBRM1-203ENST00000356770 CSMD2Q7Z408 3487 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms