RNA–Protein interactions for RNA: ENST00000356073.8

TCF4-202, Transcript of transcription factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF4, Length 8,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-202ENST00000356073 Q5W150 140 aa6.83□□□□□ -1.32
TCF4-202ENST00000356073 ATMQ13315 3056 aa6.82□□□□□ -1.32
TCF4-202ENST00000356073 HIVEP1P15822 2718 aa6.8□□□□□ -1.32
TCF4-202ENST00000356073 SPRR1AP35321 89 aa6.8□□□□□ -1.32
TCF4-202ENST00000356073 A0A096LNT2 108 aa6.79□□□□□ -1.32
TCF4-202ENST00000356073 SPRR1BP22528 89 aa6.79□□□□□ -1.32
TCF4-202ENST00000356073 KRTAP10-1P60331 282 aa6.78□□□□□ -1.32
TCF4-202ENST00000356073 COL6A3P12111 3177 aa6.78□□□□□ -1.32
TCF4-202ENST00000356073 TGP01266 2768 aa6.76□□□□□ -1.33
TCF4-202ENST00000356073 A8MUU9 505 aa6.75□□□□□ -1.33
TCF4-202ENST00000356073 ZFHX3Q15911 3703 aa6.74□□□□□ -1.33
TCF4-202ENST00000356073 KRTAP10-2P60368 255 aa6.72□□□□□ -1.33
TCF4-202ENST00000356073 CELSR1Q9NYQ6 3014 aa6.72□□□□□ -1.33
TCF4-202ENST00000356073 TNP1P09430 55 aa6.7□□□□□ -1.34
TCF4-202ENST00000356073 PANO1I0J062 215 aa6.7□□□□□ -1.34
TCF4-202ENST00000356073 PP632Q6XCG6 107 aa6.69□□□□□ -1.34
TCF4-202ENST00000356073 C10orf95Q9H7T3 257 aa6.68□□□□□ -1.34
TCF4-202ENST00000356073 KRTAP10-8P60410 259 aa6.66□□□□□ -1.34
TCF4-202ENST00000356073 CFAP47Q6ZTR5 3102 aa6.66□□□□□ -1.34
TCF4-202ENST00000356073 SZT2Q5T011 3432 aa6.64□□□□□ -1.35
TCF4-202ENST00000356073 HRNRQ86YZ3 2850 aaPredicted RBP6.62□□□□□ -1.35
TCF4-202ENST00000356073 KRTAP1-1Q07627 177 aa6.59□□□□□ -1.35
TCF4-202ENST00000356073 SPTBN5Q9NRC6 3674 aaKnown RBP6.59□□□□□ -1.35
TCF4-202ENST00000356073 KRTAP1-3Q8IUG1 177 aa6.59□□□□□ -1.35
TCF4-202ENST00000356073 FLNCQ14315 2725 aa6.58□□□□□ -1.36
TCF4-202ENST00000356073 KRTAP29-1A8MX34 341 aaPredicted RBP6.58□□□□□ -1.36
TCF4-202ENST00000356073 KRTAP26-1Q6PEX3 210 aa6.58□□□□□ -1.36
TCF4-202ENST00000356073 VCANP13611 3396 aa6.57□□□□□ -1.36
TCF4-202ENST00000356073 EYSQ5T1H1 3165 aa6.55□□□□□ -1.36
TCF4-202ENST00000356073 SPEGQ15772 3267 aa6.53□□□□□ -1.36
TCF4-202ENST00000356073 RPS29P62273 56 aaKnown RBP6.53□□□□□ -1.36
TCF4-202ENST00000356073 A0A1B0GVY2 172 aa6.52□□□□□ -1.37
TCF4-202ENST00000356073 MYO15AQ9UKN7 3530 aa6.52□□□□□ -1.37
TCF4-202ENST00000356073 KRTAP11-1Q8IUC1 163 aa6.5□□□□□ -1.37
TCF4-202ENST00000356073 FBN2P35556 2912 aa6.49□□□□□ -1.37
TCF4-202ENST00000356073 WDFY3Q8IZQ1 3526 aa6.49□□□□□ -1.37
TCF4-202ENST00000356073 PRO2289Q9P1D8 64 aa6.49□□□□□ -1.37
TCF4-202ENST00000356073 KRTAP1-5Q9BYS1 174 aa6.48□□□□□ -1.37
TCF4-202ENST00000356073 TENM4Q6N022 2769 aa6.47□□□□□ -1.37
TCF4-202ENST00000356073 TENM2Q9NT68 2774 aa6.47□□□□□ -1.37
TCF4-202ENST00000356073 KRTAP10-10P60014 251 aa6.46□□□□□ -1.38
TCF4-202ENST00000356073 OTOGQ6ZRI0 2925 aa6.45□□□□□ -1.38
TCF4-202ENST00000356073 ASPMQ8IZT6 3477 aa6.44□□□□□ -1.38
TCF4-202ENST00000356073 KRTAP4-16G5E9R7 235 aaPredicted RBP6.44□□□□□ -1.38
TCF4-202ENST00000356073 MXRA5Q9NR99 2828 aa6.42□□□□□ -1.38
TCF4-202ENST00000356073 A8MU10 97 aa6.42□□□□□ -1.38
TCF4-202ENST00000356073 COL7A1Q02388 2944 aa6.42□□□□□ -1.38
TCF4-202ENST00000356073 ZANQ9Y493 2812 aa6.41□□□□□ -1.38
TCF4-202ENST00000356073 NBPF19A0A087WUL8 3843 aa6.39□□□□□ -1.39
TCF4-202ENST00000356073 LAMA5O15230 3695 aa6.31□□□□□ -1.4
TCF4-202ENST00000356073 PKD1L1Q8TDX9 2849 aa6.27□□□□□ -1.41
TCF4-202ENST00000356073 ZFHX4Q86UP3 3567 aa6.27□□□□□ -1.41
TCF4-202ENST00000356073 DMDP11532 3685 aa6.23□□□□□ -1.41
TCF4-202ENST00000356073 VWFP04275 2813 aa6.22□□□□□ -1.41
TCF4-202ENST00000356073 LOC400499M0QZD8 3231 aa6.21□□□□□ -1.42
TCF4-202ENST00000356073 SPENQ96T58 3664 aaKnown RBP6.18□□□□□ -1.42
TCF4-202ENST00000356073 MUC3AQ02505 3323 aa6.16□□□□□ -1.42
TCF4-202ENST00000356073 Q6ZRN7 208 aaPredicted RBP6.14□□□□□ -1.43
TCF4-202ENST00000356073 RELNP78509 3460 aa6.14□□□□□ -1.43
TCF4-202ENST00000356073 AKAP9Q99996 3911 aa6.13□□□□□ -1.43
TCF4-202ENST00000356073 INE1O15225 51 aa6.12□□□□□ -1.43
TCF4-202ENST00000356073 MEGF8Q7Z7M0 2845 aa6.11□□□□□ -1.43
TCF4-202ENST00000356073 H0YAA0 97 aa6.1□□□□□ -1.43
TCF4-202ENST00000356073 SMG1Q96Q15 3661 aaKnown RBP6.08□□□□□ -1.44
TCF4-202ENST00000356073 KRTAP13-2Q52LG2 175 aa6.07□□□□□ -1.44
TCF4-202ENST00000356073 KRTAP23-1A1A580 65 aa6.06□□□□□ -1.44
TCF4-202ENST00000356073 DCHS1Q96JQ0 3298 aa6.05□□□□□ -1.44
TCF4-202ENST00000356073 KRTAP21-3Q3LHN1 58 aa6.02□□□□□ -1.45
TCF4-202ENST00000356073 XP32Q5T750 250 aa6.01□□□□□ -1.45
TCF4-202ENST00000356073 FBN1P35555 2871 aaKnown RBP5.98□□□□□ -1.45
TCF4-202ENST00000356073 KRTAP13-1Q8IUC0 172 aa5.97□□□□□ -1.45
TCF4-202ENST00000356073 CSMD1Q96PZ7 3565 aa5.94□□□□□ -1.46
TCF4-202ENST00000356073 TPRXLQ17RH7 258 aa5.94□□□□□ -1.46
TCF4-202ENST00000356073 VPS13CQ709C8 3753 aa5.88□□□□□ -1.47
TCF4-202ENST00000356073 CRCT1Q9UGL9 99 aa5.86□□□□□ -1.47
TCF4-202ENST00000356073 FBN3Q75N90 2809 aa5.8□□□□□ -1.48
TCF4-202ENST00000356073 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
TCF4-202ENST00000356073 KRTAP13-4Q3LI77 160 aa5.75□□□□□ -1.49
TCF4-202ENST00000356073 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
TCF4-202ENST00000356073 TRRAPQ9Y4A5 3859 aa5.72□□□□□ -1.49
TCF4-202ENST00000356073 BSNQ9UPA5 3926 aa5.7□□□□□ -1.5
TCF4-202ENST00000356073 ALMS1Q8TCU4 4167 aa5.68□□□□□ -1.5
TCF4-202ENST00000356073 KRTAP7-1Q8IUC3 87 aa5.67□□□□□ -1.5
TCF4-202ENST00000356073 CUBNO60494 3623 aa5.66□□□□□ -1.5
TCF4-202ENST00000356073 SVEP1Q4LDE5 3571 aa5.66□□□□□ -1.5
TCF4-202ENST00000356073 KRTAP13-3Q3SY46 172 aa5.65□□□□□ -1.5
TCF4-202ENST00000356073 KRTAP1-4P0C5Y4 121 aa5.59□□□□□ -1.52
TCF4-202ENST00000356073 CSMD2Q7Z408 3487 aa5.58□□□□□ -1.52
TCF4-202ENST00000356073 CMYA5Q8N3K9 4069 aa5.53□□□□□ -1.52
TCF4-202ENST00000356073 KRTAP12-1P59990 96 aa5.5□□□□□ -1.53
TCF4-202ENST00000356073 KRTAP10-6P60371 365 aaPredicted RBP5.5□□□□□ -1.53
TCF4-202ENST00000356073 CSMD3Q7Z407 3707 aa5.48□□□□□ -1.53
TCF4-202ENST00000356073 LYSTQ99698 3801 aa5.42□□□□□ -1.54
TCF4-202ENST00000356073 LORP23490 312 aaPredicted RBP5.32□□□□□ -1.56
TCF4-202ENST00000356073 DNAH3Q8TD57 4116 aa5.32□□□□□ -1.56
TCF4-202ENST00000356073 KRTAP10-12P60413 245 aa5.28□□□□□ -1.56
TCF4-202ENST00000356073 ZNF469Q96JG9 3925 aaPredicted RBP5.26□□□□□ -1.57
TCF4-202ENST00000356073 KRTAP10-5P60370 271 aa5.22□□□□□ -1.57
TCF4-202ENST00000356073 KMT2AQ03164 3969 aa5.16□□□□□ -1.58
TCF4-202ENST00000356073 HECTD4Q9Y4D8 3996 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms