RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 LINC00483Q53H64 154 aa4.62□□□□□ -1.67
CD46-203ENST00000354848 MAST4O15021 2626 aa4.61□□□□□ -1.67
CD46-203ENST00000354848 NSD1Q96L73 2696 aaPredicted RBP4.61□□□□□ -1.67
CD46-203ENST00000354848 ZNF861PO60384 105 aa4.61□□□□□ -1.67
CD46-203ENST00000354848 SPINK6Q6UWN8 80 aa4.61□□□□□ -1.67
CD46-203ENST00000354848 WWC2-AS2Q96NR7 200 aa4.61□□□□□ -1.67
CD46-203ENST00000354848 NBEAL1Q6ZS30 2694 aa4.6□□□□□ -1.67
CD46-203ENST00000354848 PANO1I0J062 215 aa4.6□□□□□ -1.67
CD46-203ENST00000354848 INAFM1C9JVW0 142 aa4.59□□□□□ -1.67
CD46-203ENST00000354848 C14orf177Q52M58 125 aa4.57□□□□□ -1.68
CD46-203ENST00000354848 C1orf134Q5TEV5 83 aa4.57□□□□□ -1.68
CD46-203ENST00000354848 ANAPC11Q9NYG5 84 aa4.57□□□□□ -1.68
CD46-203ENST00000354848 CMYA5Q8N3K9 4069 aa4.56□□□□□ -1.68
CD46-203ENST00000354848 IGKV2-30P06310 120 aa4.55□□□□□ -1.68
CD46-203ENST00000354848 ZNF706Q9Y5V0 76 aaPredicted RBP4.55□□□□□ -1.68
CD46-203ENST00000354848 COL6A5A8TX70 2615 aa4.55□□□□□ -1.68
CD46-203ENST00000354848 FRAS1Q86XX4 4008 aa4.55□□□□□ -1.68
CD46-203ENST00000354848 FAM229AH3BQW9 127 aa4.55□□□□□ -1.68
CD46-203ENST00000354848 NOTCH1P46531 2555 aa4.55□□□□□ -1.68
CD46-203ENST00000354848 IGLV7-43P04211 117 aa4.54□□□□□ -1.68
CD46-203ENST00000354848 DNAH8Q96JB1 4490 aa4.53□□□□□ -1.68
CD46-203ENST00000354848 DNAH3Q8TD57 4116 aa4.53□□□□□ -1.68
CD46-203ENST00000354848 HUWE1Q7Z6Z7 4374 aaKnown RBP4.53□□□□□ -1.68
CD46-203ENST00000354848 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.52□□□□□ -1.69
CD46-203ENST00000354848 ROMO1P60602 79 aa4.52□□□□□ -1.69
CD46-203ENST00000354848 KRTAP25-1Q3LHN0 102 aa4.51□□□□□ -1.69
CD46-203ENST00000354848 DNAH7Q8WXX0 4024 aa4.51□□□□□ -1.69
CD46-203ENST00000354848 SPACA4Q8TDM5 124 aa4.51□□□□□ -1.69
CD46-203ENST00000354848 MEGF8Q7Z7M0 2845 aa4.5□□□□□ -1.69
CD46-203ENST00000354848 PSORS1C2Q9UIG4 136 aa4.5□□□□□ -1.69
CD46-203ENST00000354848 A8MUU9 505 aa4.5□□□□□ -1.69
CD46-203ENST00000354848 UBE2DNLQ8IWF7 75 aa4.49□□□□□ -1.69
CD46-203ENST00000354848 CIRBP-AS1Q8TBR5 109 aa4.49□□□□□ -1.69
CD46-203ENST00000354848 IGLV5-52A0A0A0MRZ9 124 aa4.48□□□□□ -1.69
CD46-203ENST00000354848 IGKV2D-30A0A075B6S6 120 aa4.48□□□□□ -1.69
CD46-203ENST00000354848 STAB1Q9NY15 2570 aa4.47□□□□□ -1.69
CD46-203ENST00000354848 LINC00304Q8N9R0 145 aa4.47□□□□□ -1.69
CD46-203ENST00000354848 H0YAA0 97 aa4.46□□□□□ -1.7
CD46-203ENST00000354848 SPINK1P00995 79 aa4.46□□□□□ -1.7
CD46-203ENST00000354848 LY6G6CO95867 125 aa4.45□□□□□ -1.7
CD46-203ENST00000354848 Q6ZSA8 131 aa4.45□□□□□ -1.7
CD46-203ENST00000354848 KRTAP16-1A8MUX0 517 aa4.44□□□□□ -1.7
CD46-203ENST00000354848 STAB2Q8WWQ8 2551 aa4.44□□□□□ -1.7
CD46-203ENST00000354848 Q6ZRN7 208 aaPredicted RBP4.44□□□□□ -1.7
CD46-203ENST00000354848 DNAH17Q9UFH2 4485 aa4.43□□□□□ -1.7
CD46-203ENST00000354848 HECTD4Q9Y4D8 3996 aa4.43□□□□□ -1.7
CD46-203ENST00000354848 APLNQ9ULZ1 77 aa4.43□□□□□ -1.7
CD46-203ENST00000354848 TGP01266 2768 aa4.42□□□□□ -1.7
CD46-203ENST00000354848 P0C880 135 aa4.41□□□□□ -1.7
CD46-203ENST00000354848 SSBP3-AS1Q7Z2R9 100 aa4.41□□□□□ -1.7
CD46-203ENST00000354848 FLG2Q5D862 2391 aaPredicted RBP4.41□□□□□ -1.7
CD46-203ENST00000354848 NBDYA0A0U1RRE5 68 aa4.41□□□□□ -1.7
CD46-203ENST00000354848 Q8N1X5 172 aa4.4□□□□□ -1.71
CD46-203ENST00000354848 PLECQ15149 4684 aaKnown RBP4.39□□□□□ -1.71
CD46-203ENST00000354848 VPS13DQ5THJ4 4388 aa4.39□□□□□ -1.71
CD46-203ENST00000354848 CRIPTQ9P021 101 aa4.39□□□□□ -1.71
CD46-203ENST00000354848 TYMSOSQ8TAI1 123 aa4.38□□□□□ -1.71
CD46-203ENST00000354848 DYNC2H1Q8NCM8 4307 aaKnown RBP4.38□□□□□ -1.71
CD46-203ENST00000354848 A0A1B0GU33 70 aa4.37□□□□□ -1.71
CD46-203ENST00000354848 KRTAP24-1Q3LI83 254 aa4.36□□□□□ -1.71
CD46-203ENST00000354848 A0A087WTM6 91 aa4.36□□□□□ -1.71
CD46-203ENST00000354848 MGAM2Q2M2H8 2515 aa4.35□□□□□ -1.71
CD46-203ENST00000354848 H1FX-AS1Q4G0G2 97 aa4.34□□□□□ -1.71
CD46-203ENST00000354848 KRTAP13-2Q52LG2 175 aa4.33□□□□□ -1.72
CD46-203ENST00000354848 KMT2AQ03164 3969 aa4.33□□□□□ -1.72
CD46-203ENST00000354848 FBN3Q75N90 2809 aa4.31□□□□□ -1.72
CD46-203ENST00000354848 K7ERS5 55 aa4.3□□□□□ -1.72
CD46-203ENST00000354848 DNAH2Q9P225 4427 aa4.29□□□□□ -1.72
CD46-203ENST00000354848 DNAH11Q96DT5 4516 aa4.26□□□□□ -1.73
CD46-203ENST00000354848 SPINT4Q6UDR6 99 aa4.26□□□□□ -1.73
CD46-203ENST00000354848 KRTAP3-1Q9BYR8 98 aa4.26□□□□□ -1.73
CD46-203ENST00000354848 STARD9Q9P2P6 4700 aa4.26□□□□□ -1.73
CD46-203ENST00000354848 COX6B2Q6YFQ2 88 aa4.25□□□□□ -1.73
CD46-203ENST00000354848 DNAH6Q9C0G6 4158 aa4.25□□□□□ -1.73
CD46-203ENST00000354848 PRKDCP78527 4128 aaKnown RBP4.24□□□□□ -1.73
CD46-203ENST00000354848 NUPR2A6NF83 97 aa4.23□□□□□ -1.73
CD46-203ENST00000354848 TPRXLQ17RH7 258 aa4.23□□□□□ -1.73
CD46-203ENST00000354848 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
CD46-203ENST00000354848 KRTAP1-4P0C5Y4 121 aa4.21□□□□□ -1.74
CD46-203ENST00000354848 C20orf166-AS1Q96NR2 134 aa4.21□□□□□ -1.74
CD46-203ENST00000354848 KRTAP15-1Q3LI76 137 aa4.2□□□□□ -1.74
CD46-203ENST00000354848 DNAH5Q8TE73 4624 aa4.2□□□□□ -1.74
CD46-203ENST00000354848 RPL37P61927 97 aaKnown RBP4.19□□□□□ -1.74
CD46-203ENST00000354848 LRP1BQ9NZR2 4599 aa4.18□□□□□ -1.74
CD46-203ENST00000354848 C10orf95Q9H7T3 257 aa4.17□□□□□ -1.74
CD46-203ENST00000354848 KRTAP21-3Q3LHN1 58 aa4.17□□□□□ -1.74
CD46-203ENST00000354848 DNHD1Q96M86 4753 aa4.17□□□□□ -1.74
CD46-203ENST00000354848 VPS13BQ7Z7G8 4022 aa4.14□□□□□ -1.75
CD46-203ENST00000354848 KRTAP13-4Q3LI77 160 aa4.14□□□□□ -1.75
CD46-203ENST00000354848 A0A0D9SG42 100 aa4.14□□□□□ -1.75
CD46-203ENST00000354848 KRTAP10-2P60368 255 aa4.13□□□□□ -1.75
CD46-203ENST00000354848 DMBT1Q9UGM3 2413 aaPredicted RBP4.13□□□□□ -1.75
CD46-203ENST00000354848 C9orf92A6NGG3 77 aa4.13□□□□□ -1.75
CD46-203ENST00000354848 KRTAP10-6P60371 365 aaPredicted RBP4.12□□□□□ -1.75
CD46-203ENST00000354848 LCE2DQ5TA82 110 aaPredicted RBP4.11□□□□□ -1.75
CD46-203ENST00000354848 RPS29P62273 56 aaKnown RBP4.08□□□□□ -1.76
CD46-203ENST00000354848 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
CD46-203ENST00000354848 KRTAP10-1P60331 282 aa4.08□□□□□ -1.76
CD46-203ENST00000354848 FAT2Q9NYQ8 4349 aa4.07□□□□□ -1.76
CD46-203ENST00000354848 PKD1P98161 4303 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms