RNA–Protein interactions for RNA: ENST00000353442.9

LMBR1-201, Transcript of limb development membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMBR1, Length 7,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-201ENST00000353442 KRTAP15-1Q3LI76 137 aa6.68□□□□□ -1.34
LMBR1-201ENST00000353442 CFAP47Q6ZTR5 3102 aa6.63□□□□□ -1.35
LMBR1-201ENST00000353442 UBR5O95071 2799 aaPredicted RBP6.63□□□□□ -1.35
LMBR1-201ENST00000353442 BRCA2P51587 3418 aa6.63□□□□□ -1.35
LMBR1-201ENST00000353442 MAP1AP78559 2803 aaPredicted RBP6.63□□□□□ -1.35
LMBR1-201ENST00000353442 APCP25054 2843 aa6.62□□□□□ -1.35
LMBR1-201ENST00000353442 DMXL2Q8TDJ6 3036 aa6.59□□□□□ -1.35
LMBR1-201ENST00000353442 RANBP2P49792 3224 aaKnown RBP6.58□□□□□ -1.36
LMBR1-201ENST00000353442 VCANP13611 3396 aa6.57□□□□□ -1.36
LMBR1-201ENST00000353442 TRANK1O15050 2925 aa6.57□□□□□ -1.36
LMBR1-201ENST00000353442 HIVEP1P15822 2718 aa6.57□□□□□ -1.36
LMBR1-201ENST00000353442 COL6A3P12111 3177 aa6.56□□□□□ -1.36
LMBR1-201ENST00000353442 VPS13AQ96RL7 3174 aa6.56□□□□□ -1.36
LMBR1-201ENST00000353442 DSPP15924 2871 aaKnown RBP6.54□□□□□ -1.36
LMBR1-201ENST00000353442 LAMA1P25391 3075 aa6.53□□□□□ -1.36
LMBR1-201ENST00000353442 TACC2O95359 2948 aa6.52□□□□□ -1.37
LMBR1-201ENST00000353442 KALRNO60229 2985 aa6.51□□□□□ -1.37
LMBR1-201ENST00000353442 ASH1LQ9NR48 2969 aaKnown RBP6.5□□□□□ -1.37
LMBR1-201ENST00000353442 TENM4Q6N022 2769 aa6.49□□□□□ -1.37
LMBR1-201ENST00000353442 KRTAP13-4Q3LI77 160 aa6.48□□□□□ -1.37
LMBR1-201ENST00000353442 CHD9Q3L8U1 2897 aa6.48□□□□□ -1.37
LMBR1-201ENST00000353442 UTP20O75691 2785 aaKnown RBP6.48□□□□□ -1.37
LMBR1-201ENST00000353442 SPEGQ15772 3267 aa6.47□□□□□ -1.37
LMBR1-201ENST00000353442 CDH23Q9H251 3354 aa6.44□□□□□ -1.38
LMBR1-201ENST00000353442 ITPR1Q14643 2758 aa6.4□□□□□ -1.38
LMBR1-201ENST00000353442 HTTP42858 3142 aa6.39□□□□□ -1.39
LMBR1-201ENST00000353442 DNAH14Q0VDD8 3507 aa6.38□□□□□ -1.39
LMBR1-201ENST00000353442 TENM2Q9NT68 2774 aa6.38□□□□□ -1.39
LMBR1-201ENST00000353442 SZT2Q5T011 3432 aa6.37□□□□□ -1.39
LMBR1-201ENST00000353442 LRBAP50851 2863 aa6.36□□□□□ -1.39
LMBR1-201ENST00000353442 KRTAP12-1P59990 96 aa6.35□□□□□ -1.39
LMBR1-201ENST00000353442 FLNCQ14315 2725 aa6.33□□□□□ -1.4
LMBR1-201ENST00000353442 COL12A1Q99715 3063 aa6.32□□□□□ -1.4
LMBR1-201ENST00000353442 TENM1Q9UKZ4 2725 aa6.31□□□□□ -1.4
LMBR1-201ENST00000353442 ATMQ13315 3056 aa6.29□□□□□ -1.4
LMBR1-201ENST00000353442 BOD1L1Q8NFC6 3051 aa6.26□□□□□ -1.41
LMBR1-201ENST00000353442 CELSR2Q9HCU4 2923 aa6.21□□□□□ -1.42
LMBR1-201ENST00000353442 KRTAP10-12P60413 245 aa6.19□□□□□ -1.42
LMBR1-201ENST00000353442 LORP23490 312 aaPredicted RBP6.17□□□□□ -1.42
LMBR1-201ENST00000353442 FRYLO94915 3013 aa6.15□□□□□ -1.42
LMBR1-201ENST00000353442 ADGRG4Q8IZF6 3080 aa6.15□□□□□ -1.42
LMBR1-201ENST00000353442 TENM3Q9P273 2699 aa6.14□□□□□ -1.43
LMBR1-201ENST00000353442 EYSQ5T1H1 3165 aa6.12□□□□□ -1.43
LMBR1-201ENST00000353442 KRTAP3-1Q9BYR8 98 aa6.11□□□□□ -1.43
LMBR1-201ENST00000353442 DCHS2Q6V1P9 2916 aa6.11□□□□□ -1.43
LMBR1-201ENST00000353442 TGP01266 2768 aa6.1□□□□□ -1.43
LMBR1-201ENST00000353442 ZZEF1O43149 2961 aa6.1□□□□□ -1.43
LMBR1-201ENST00000353442 ZFHX4Q86UP3 3567 aa6.09□□□□□ -1.43
LMBR1-201ENST00000353442 KRTAP10-5P60370 271 aa6.05□□□□□ -1.44
LMBR1-201ENST00000353442 NF1P21359 2839 aa6.04□□□□□ -1.44
LMBR1-201ENST00000353442 KRTAP10-6P60371 365 aaPredicted RBP6.04□□□□□ -1.44
LMBR1-201ENST00000353442 TNRC18O15417 2968 aaPredicted RBP6.04□□□□□ -1.44
LMBR1-201ENST00000353442 KRTAP4-5Q9BYR2 181 aa6.03□□□□□ -1.44
LMBR1-201ENST00000353442 WDFY3Q8IZQ1 3526 aa6.02□□□□□ -1.45
LMBR1-201ENST00000353442 CELSR1Q9NYQ6 3014 aa6.02□□□□□ -1.45
LMBR1-201ENST00000353442 NBPF19A0A087WUL8 3843 aa6.01□□□□□ -1.45
LMBR1-201ENST00000353442 ASPMQ8IZT6 3477 aa6.01□□□□□ -1.45
LMBR1-201ENST00000353442 MYO15AQ9UKN7 3530 aa6.01□□□□□ -1.45
LMBR1-201ENST00000353442 PKD1L1Q8TDX9 2849 aa6□□□□□ -1.45
LMBR1-201ENST00000353442 PDZD2O15018 2839 aa6□□□□□ -1.45
LMBR1-201ENST00000353442 VWFP04275 2813 aa5.98□□□□□ -1.45
LMBR1-201ENST00000353442 NBEAQ8NFP9 2946 aa5.96□□□□□ -1.45
LMBR1-201ENST00000353442 KRTAP8-1Q8IUC2 63 aa5.96□□□□□ -1.46
LMBR1-201ENST00000353442 SPTBN5Q9NRC6 3674 aaKnown RBP5.96□□□□□ -1.46
LMBR1-201ENST00000353442 LOC400499M0QZD8 3231 aa5.94□□□□□ -1.46
LMBR1-201ENST00000353442 ZANQ9Y493 2812 aa5.94□□□□□ -1.46
LMBR1-201ENST00000353442 KRTAP12-3P60328 96 aa5.93□□□□□ -1.46
LMBR1-201ENST00000353442 LCE3AQ5TA76 89 aa5.9□□□□□ -1.47
LMBR1-201ENST00000353442 NIPBLQ6KC79 2804 aaeCLIP5.87□□□□□ -1.47
LMBR1-201ENST00000353442 INE1O15225 51 aa5.87□□□□□ -1.47
LMBR1-201ENST00000353442 MUC3AQ02505 3323 aa5.86□□□□□ -1.47
LMBR1-201ENST00000353442 MT1HL1P0DM35 61 aa5.86□□□□□ -1.47
LMBR1-201ENST00000353442 DMDP11532 3685 aa5.83□□□□□ -1.48
LMBR1-201ENST00000353442 DCHS1Q96JQ0 3298 aa5.82□□□□□ -1.48
LMBR1-201ENST00000353442 FBN2P35556 2912 aa5.73□□□□□ -1.49
LMBR1-201ENST00000353442 SPENQ96T58 3664 aaKnown RBP5.73□□□□□ -1.49
LMBR1-201ENST00000353442 DMXL1Q9Y485 3027 aa5.72□□□□□ -1.49
LMBR1-201ENST00000353442 ZFHX3Q15911 3703 aa5.69□□□□□ -1.5
LMBR1-201ENST00000353442 KRTAP3-2Q9BYR7 98 aa5.65□□□□□ -1.5
LMBR1-201ENST00000353442 FBN3Q75N90 2809 aa5.64□□□□□ -1.51
LMBR1-201ENST00000353442 RELNP78509 3460 aa5.64□□□□□ -1.51
LMBR1-201ENST00000353442 KRTAP3-3Q9BYR6 98 aa5.63□□□□□ -1.51
LMBR1-201ENST00000353442 SPRR2FQ96RM1 72 aa5.6□□□□□ -1.51
LMBR1-201ENST00000353442 CSMD1Q96PZ7 3565 aa5.56□□□□□ -1.52
LMBR1-201ENST00000353442 SRRM2Q9UQ35 2752 aaKnown RBP5.56□□□□□ -1.52
LMBR1-201ENST00000353442 HRNRQ86YZ3 2850 aaPredicted RBP5.55□□□□□ -1.52
LMBR1-201ENST00000353442 KRTAP10-7P60409 375 aaPredicted RBP5.53□□□□□ -1.52
LMBR1-201ENST00000353442 LAMA5O15230 3695 aa5.51□□□□□ -1.53
LMBR1-201ENST00000353442 MXRA5Q9NR99 2828 aa5.49□□□□□ -1.53
LMBR1-201ENST00000353442 MEGF8Q7Z7M0 2845 aa5.45□□□□□ -1.54
LMBR1-201ENST00000353442 ANK3Q12955 4377 aaKnown RBP5.42□□□□□ -1.54
LMBR1-201ENST00000353442 COL7A1Q02388 2944 aa5.4□□□□□ -1.55
LMBR1-201ENST00000353442 KRTAP10-4P60372 401 aaPredicted RBP5.36□□□□□ -1.55
LMBR1-201ENST00000353442 SPRR2EP22531 72 aa5.36□□□□□ -1.55
LMBR1-201ENST00000353442 SPRR2BP35325 72 aa5.36□□□□□ -1.55
LMBR1-201ENST00000353442 SPRR2AP35326 72 aa5.36□□□□□ -1.55
LMBR1-201ENST00000353442 MT1HP80294 61 aa5.35□□□□□ -1.55
LMBR1-201ENST00000353442 HUWE1Q7Z6Z7 4374 aaKnown RBP5.35□□□□□ -1.55
LMBR1-201ENST00000353442 ALMS1Q8TCU4 4167 aa5.33□□□□□ -1.56
LMBR1-201ENST00000353442 CSMD2Q7Z408 3487 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms