RNA–Protein interactions for RNA: ENST00000352127.11

XRCC3-201, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-201ENST00000352127 ASB16-AS1Q495Z4 193 aa10.5□□□□□ -0.73
XRCC3-201ENST00000352127 C1orf134Q5TEV5 83 aa10.49□□□□□ -0.73
XRCC3-201ENST00000352127 DNAH5Q8TE73 4624 aa10.48□□□□□ -0.73
XRCC3-201ENST00000352127 CIRBP-AS1Q8TBR5 109 aa10.48□□□□□ -0.73
XRCC3-201ENST00000352127 A8MUN3 132 aa10.47□□□□□ -0.73
XRCC3-201ENST00000352127 SPANXA2-OT1Q8N9U9 137 aa10.47□□□□□ -0.73
XRCC3-201ENST00000352127 CDK2AP2O75956 126 aa10.47□□□□□ -0.73
XRCC3-201ENST00000352127 CD164Q04900 197 aa10.47□□□□□ -0.73
XRCC3-201ENST00000352127 IGLV7-43P04211 117 aa10.45□□□□□ -0.74
XRCC3-201ENST00000352127 KRTAP10-2P60368 255 aa10.44□□□□□ -0.74
XRCC3-201ENST00000352127 MRPL34Q9BQ48 92 aaKnown RBP10.42□□□□□ -0.74
XRCC3-201ENST00000352127 C4orf48Q5BLP8 95 aa10.41□□□□□ -0.74
XRCC3-201ENST00000352127 HYDINQ4G0P3 5121 aa10.41□□□□□ -0.74
XRCC3-201ENST00000352127 A8MU10 97 aa10.4□□□□□ -0.74
XRCC3-201ENST00000352127 COA5Q86WW8 74 aa10.4□□□□□ -0.74
XRCC3-201ENST00000352127 TP53AIP1Q9HCN2 124 aa10.4□□□□□ -0.74
XRCC3-201ENST00000352127 IGLV7-46A0A075B6I9 117 aa10.39□□□□□ -0.75
XRCC3-201ENST00000352127 Q8N9P0 234 aaPredicted RBP10.38□□□□□ -0.75
XRCC3-201ENST00000352127 Q5W150 140 aa10.37□□□□□ -0.75
XRCC3-201ENST00000352127 LRP1BQ9NZR2 4599 aa10.37□□□□□ -0.75
XRCC3-201ENST00000352127 Q5VV11 94 aa10.35□□□□□ -0.75
XRCC3-201ENST00000352127 PRR15LQ9BU68 103 aa10.32□□□□□ -0.76
XRCC3-201ENST00000352127 RETNLBQ9BQ08 111 aa10.3□□□□□ -0.76
XRCC3-201ENST00000352127 PKD1P98161 4303 aa10.3□□□□□ -0.76
XRCC3-201ENST00000352127 KRTAP10-1P60331 282 aa10.28□□□□□ -0.76
XRCC3-201ENST00000352127 KRTAP13-2Q52LG2 175 aa10.27□□□□□ -0.76
XRCC3-201ENST00000352127 CHKB-CPT1BH3BT56 60 aa10.26□□□□□ -0.77
XRCC3-201ENST00000352127 SPAG11AQ6PDA7 123 aa10.26□□□□□ -0.77
XRCC3-201ENST00000352127 FAT2Q9NYQ8 4349 aa10.26□□□□□ -0.77
XRCC3-201ENST00000352127 HRES1P13985 223 aa10.25□□□□□ -0.77
XRCC3-201ENST00000352127 KRTAP13-3Q3SY46 172 aa10.23□□□□□ -0.77
XRCC3-201ENST00000352127 LIMD2Q9BT23 127 aa10.23□□□□□ -0.77
XRCC3-201ENST00000352127 VPS13BQ7Z7G8 4022 aa10.23□□□□□ -0.77
XRCC3-201ENST00000352127 SSBP3-AS1Q7Z2R9 100 aa10.22□□□□□ -0.77
XRCC3-201ENST00000352127 PMAIP1Q13794 54 aa10.19□□□□□ -0.78
XRCC3-201ENST00000352127 LOC101927531A0A1B0GV80 90 aa10.17□□□□□ -0.78
XRCC3-201ENST00000352127 PRR26Q8N8Z3 221 aa10.17□□□□□ -0.78
XRCC3-201ENST00000352127 LINC00313P59037 77 aa10.17□□□□□ -0.78
XRCC3-201ENST00000352127 Q6ZSA8 131 aa10.15□□□□□ -0.79
XRCC3-201ENST00000352127 A6NED7 52 aa10.13□□□□□ -0.79
XRCC3-201ENST00000352127 KRTAP1-4P0C5Y4 121 aa10.13□□□□□ -0.79
XRCC3-201ENST00000352127 LCA10Q71F78 164 aa10.12□□□□□ -0.79
XRCC3-201ENST00000352127 PKHD1P08F94 4074 aa10.11□□□□□ -0.79
XRCC3-201ENST00000352127 C8orf87E5RJ46 101 aa10.11□□□□□ -0.79
XRCC3-201ENST00000352127 Q75L30 129 aa10.11□□□□□ -0.79
XRCC3-201ENST00000352127 LINC01558Q9Y6Z2 57 aa10.08□□□□□ -0.8
XRCC3-201ENST00000352127 SPTSSBQ8NFR3 76 aa10.08□□□□□ -0.8
XRCC3-201ENST00000352127 KRTAP16-1A8MUX0 517 aa10.05□□□□□ -0.8
XRCC3-201ENST00000352127 SPINK7P58062 85 aa10.04□□□□□ -0.8
XRCC3-201ENST00000352127 PLA2G1BP04054 148 aaKnown RBP10.04□□□□□ -0.8
XRCC3-201ENST00000352127 FAM229AH3BQW9 127 aa10.03□□□□□ -0.8
XRCC3-201ENST00000352127 IGKV2D-30A0A075B6S6 120 aa10□□□□□ -0.81
XRCC3-201ENST00000352127 IGKV2-30P06310 120 aa10□□□□□ -0.81
XRCC3-201ENST00000352127 ACYP2P14621 99 aa9.99□□□□□ -0.81
XRCC3-201ENST00000352127 TYMSOSQ8TAI1 123 aa9.99□□□□□ -0.81
XRCC3-201ENST00000352127 H3BS24 57 aa9.97□□□□□ -0.81
XRCC3-201ENST00000352127 DMAC1Q96GE9 116 aa9.97□□□□□ -0.81
XRCC3-201ENST00000352127 SACSQ9NZJ4 4579 aa9.95□□□□□ -0.82
XRCC3-201ENST00000352127 SMR3BP02814 79 aaPredicted RBP9.95□□□□□ -0.82
XRCC3-201ENST00000352127 CDC42SE1Q9NRR8 79 aa9.93□□□□□ -0.82
XRCC3-201ENST00000352127 FAT1Q14517 4588 aa9.9□□□□□ -0.82
XRCC3-201ENST00000352127 DYNC1H1Q14204 4646 aaKnown RBP9.89□□□□□ -0.83
XRCC3-201ENST00000352127 ATP11AUNQ6ZP68 121 aa9.87□□□□□ -0.83
XRCC3-201ENST00000352127 RBM12B-AS1Q9P1G2 102 aa9.85□□□□□ -0.83
XRCC3-201ENST00000352127 SPINK1P00995 79 aa9.85□□□□□ -0.83
XRCC3-201ENST00000352127 LINC00304Q8N9R0 145 aa9.82□□□□□ -0.84
XRCC3-201ENST00000352127 C7orf65Q6ZTY9 151 aa9.82□□□□□ -0.84
XRCC3-201ENST00000352127 A6NN06 94 aa9.8□□□□□ -0.84
XRCC3-201ENST00000352127 Q8N1X5 172 aa9.79□□□□□ -0.84
XRCC3-201ENST00000352127 C9orf92A6NGG3 77 aa9.78□□□□□ -0.84
XRCC3-201ENST00000352127 A0A1B0GU69 56 aa9.78□□□□□ -0.84
XRCC3-201ENST00000352127 APOBP04114 4563 aaKnown RBP9.74□□□□□ -0.85
XRCC3-201ENST00000352127 KTN1-AS1Q86SY8 53 aa9.72□□□□□ -0.85
XRCC3-201ENST00000352127 PKHD1L1Q86WI1 4243 aa9.66□□□□□ -0.86
XRCC3-201ENST00000352127 KRTAP10-4P60372 401 aaPredicted RBP9.64□□□□□ -0.87
XRCC3-201ENST00000352127 A0A1B0GVY2 172 aa9.62□□□□□ -0.87
XRCC3-201ENST00000352127 RPS29P62273 56 aaKnown RBP9.6□□□□□ -0.87
XRCC3-201ENST00000352127 KMT2CQ8NEZ4 4911 aaKnown RBP9.6□□□□□ -0.87
XRCC3-201ENST00000352127 RYR2Q92736 4967 aa9.58□□□□□ -0.88
XRCC3-201ENST00000352127 MIR22HGQ0VDD5 57 aa9.57□□□□□ -0.88
XRCC3-201ENST00000352127 SPATA8Q6RVD6 105 aa9.57□□□□□ -0.88
XRCC3-201ENST00000352127 LRP1Q07954 4544 aaKnown RBP9.55□□□□□ -0.88
XRCC3-201ENST00000352127 UQCR11O14957 56 aa9.55□□□□□ -0.88
XRCC3-201ENST00000352127 A8MUU9 505 aa9.54□□□□□ -0.88
XRCC3-201ENST00000352127 ADM2Q7Z4H4 148 aa9.54□□□□□ -0.88
XRCC3-201ENST00000352127 C20orf166-AS1Q96NR2 134 aa9.53□□□□□ -0.88
XRCC3-201ENST00000352127 KRTAP3-1Q9BYR8 98 aa9.53□□□□□ -0.88
XRCC3-201ENST00000352127 PRAC1Q96KF2 57 aa9.53□□□□□ -0.88
XRCC3-201ENST00000352127 FLG2Q5D862 2391 aaPredicted RBP9.52□□□□□ -0.88
XRCC3-201ENST00000352127 KRTAP21-3Q3LHN1 58 aa9.47□□□□□ -0.89
XRCC3-201ENST00000352127 FAT3Q8TDW7 4589 aa9.41□□□□□ -0.9
XRCC3-201ENST00000352127 TNXBP22105 4242 aa9.39□□□□□ -0.91
XRCC3-201ENST00000352127 MYCBP2O75592 4640 aa9.38□□□□□ -0.91
XRCC3-201ENST00000352127 HSPG2P98160 4391 aa9.38□□□□□ -0.91
XRCC3-201ENST00000352127 DMBT1Q9UGM3 2413 aaPredicted RBP9.38□□□□□ -0.91
XRCC3-201ENST00000352127 H0YAA0 97 aa9.34□□□□□ -0.91
XRCC3-201ENST00000352127 KRTAP17-1Q9BYP8 105 aa9.27□□□□□ -0.93
XRCC3-201ENST00000352127 COX6B2Q6YFQ2 88 aa9.26□□□□□ -0.93
XRCC3-201ENST00000352127 RYR3Q15413 4870 aa9.26□□□□□ -0.93
XRCC3-201ENST00000352127 Q5VSD8 79 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms