RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 FLG2Q5D862 2391 aaPredicted RBP6.27□□□□□ -1.41
ECM1-201ENST00000346569 A8MWP4 228 aa6.26□□□□□ -1.41
ECM1-201ENST00000346569 PRR15Q8IV56 129 aa6.26□□□□□ -1.41
ECM1-201ENST00000346569 LIMD2Q9BT23 127 aa6.26□□□□□ -1.41
ECM1-201ENST00000346569 FAM236AA0A1B0GUQ0 79 aa6.25□□□□□ -1.41
ECM1-201ENST00000346569 FAM236BA0A1B0GV22 79 aa6.25□□□□□ -1.41
ECM1-201ENST00000346569 NDUFB1O75438 58 aa6.23□□□□□ -1.41
ECM1-201ENST00000346569 MT1HL1P0DM35 61 aa6.23□□□□□ -1.41
ECM1-201ENST00000346569 A0A1B0GVX0 72 aa6.21□□□□□ -1.42
ECM1-201ENST00000346569 KRTAP29-1A8MX34 341 aaPredicted RBP6.2□□□□□ -1.42
ECM1-201ENST00000346569 OXTP01178 125 aa6.2□□□□□ -1.42
ECM1-201ENST00000346569 HMCN2Q8NDA2 5059 aa6.2□□□□□ -1.42
ECM1-201ENST00000346569 MMP24-AS1A0A0U1RRL7 71 aa6.18□□□□□ -1.42
ECM1-201ENST00000346569 HCG22E2RYF7 251 aa6.18□□□□□ -1.42
ECM1-201ENST00000346569 C8orf17Q9NRJ1 99 aa6.18□□□□□ -1.42
ECM1-201ENST00000346569 ATOX1O00244 68 aa6.17□□□□□ -1.42
ECM1-201ENST00000346569 NOTCH2NLQ7Z3S9 236 aa6.17□□□□□ -1.42
ECM1-201ENST00000346569 IGHV6-1A0A0B4J1U7 121 aa6.16□□□□□ -1.42
ECM1-201ENST00000346569 PCP4P48539 62 aa6.16□□□□□ -1.42
ECM1-201ENST00000346569 CASC2Q6XLA1 102 aa6.15□□□□□ -1.43
ECM1-201ENST00000346569 WFDC13Q8IUB5 93 aa6.15□□□□□ -1.43
ECM1-201ENST00000346569 hDV103S1A0JD37 113 aa6.14□□□□□ -1.43
ECM1-201ENST00000346569 C8orf87E5RJ46 101 aa6.14□□□□□ -1.43
ECM1-201ENST00000346569 ANAPC13Q9BS18 74 aa6.14□□□□□ -1.43
ECM1-201ENST00000346569 OCR1Q9BZK8 76 aa6.13□□□□□ -1.43
ECM1-201ENST00000346569 LINC00313P59037 77 aa6.12□□□□□ -1.43
ECM1-201ENST00000346569 SMIM20Q8N5G0 67 aa6.12□□□□□ -1.43
ECM1-201ENST00000346569 TRAV7A0A075B6U4 112 aa6.11□□□□□ -1.43
ECM1-201ENST00000346569 SERP2Q8N6R1 65 aa6.11□□□□□ -1.43
ECM1-201ENST00000346569 TMEM254Q8TBM7 123 aa6.1□□□□□ -1.43
ECM1-201ENST00000346569 COX7CP15954 63 aa6.09□□□□□ -1.43
ECM1-201ENST00000346569 RETNLBQ9BQ08 111 aa6.09□□□□□ -1.43
ECM1-201ENST00000346569 MRPL34Q9BQ48 92 aaKnown RBP6.09□□□□□ -1.43
ECM1-201ENST00000346569 KRTAP16-1A8MUX0 517 aa6.08□□□□□ -1.44
ECM1-201ENST00000346569 LCE2BO14633 110 aa6.06□□□□□ -1.44
ECM1-201ENST00000346569 UQCRQO14949 82 aa6.06□□□□□ -1.44
ECM1-201ENST00000346569 FP248Q71RG6 208 aaPredicted RBP6.06□□□□□ -1.44
ECM1-201ENST00000346569 Q8N9P0 234 aaPredicted RBP6.06□□□□□ -1.44
ECM1-201ENST00000346569 UBR4Q5T4S7 5183 aa6.06□□□□□ -1.44
ECM1-201ENST00000346569 CCDC179H3BU77 68 aa6.05□□□□□ -1.44
ECM1-201ENST00000346569 TP53AIP1Q9HCN2 124 aa6.03□□□□□ -1.44
ECM1-201ENST00000346569 LRP2P98164 4655 aa6.01□□□□□ -1.45
ECM1-201ENST00000346569 C5orf47Q569G3 176 aa6.01□□□□□ -1.45
ECM1-201ENST00000346569 C9orf92A6NGG3 77 aa6□□□□□ -1.45
ECM1-201ENST00000346569 IGLV7-46A0A075B6I9 117 aa5.99□□□□□ -1.45
ECM1-201ENST00000346569 NDUFS5O43920 106 aa5.99□□□□□ -1.45
ECM1-201ENST00000346569 Q5W150 140 aa5.99□□□□□ -1.45
ECM1-201ENST00000346569 C20orf197Q8N268 126 aa5.99□□□□□ -1.45
ECM1-201ENST00000346569 C20orf166-AS1Q96NR2 134 aa5.99□□□□□ -1.45
ECM1-201ENST00000346569 A0A0U1RQV1 116 aa5.98□□□□□ -1.45
ECM1-201ENST00000346569 A8MUU9 505 aa5.98□□□□□ -1.45
ECM1-201ENST00000346569 KRTAP13-3Q3SY46 172 aa5.98□□□□□ -1.45
ECM1-201ENST00000346569 KLKP1Q107X0 134 aa5.97□□□□□ -1.45
ECM1-201ENST00000346569 TRAV22A0A0B4J277 110 aa5.96□□□□□ -1.46
ECM1-201ENST00000346569 ZCCHC13Q8WW36 166 aaKnown RBP5.96□□□□□ -1.46
ECM1-201ENST00000346569 H0Y9P7 68 aa5.95□□□□□ -1.46
ECM1-201ENST00000346569 H3BPC8 53 aa5.94□□□□□ -1.46
ECM1-201ENST00000346569 PRR4Q16378 134 aa5.94□□□□□ -1.46
ECM1-201ENST00000346569 CYSTM1Q9H1C7 97 aa5.94□□□□□ -1.46
ECM1-201ENST00000346569 SNURFQ9Y675 71 aa5.94□□□□□ -1.46
ECM1-201ENST00000346569 MP68P56378 58 aa5.93□□□□□ -1.46
ECM1-201ENST00000346569 Q75L30 129 aa5.92□□□□□ -1.46
ECM1-201ENST00000346569 LINC00208Q96KT6 92 aa5.92□□□□□ -1.46
ECM1-201ENST00000346569 TPRXLQ17RH7 258 aa5.91□□□□□ -1.46
ECM1-201ENST00000346569 XP32Q5T750 250 aa5.91□□□□□ -1.46
ECM1-201ENST00000346569 C1orf64Q8NEQ6 169 aa5.91□□□□□ -1.46
ECM1-201ENST00000346569 H7BZZ5 65 aa5.89□□□□□ -1.47
ECM1-201ENST00000346569 NDUFC1O43677 76 aa5.87□□□□□ -1.47
ECM1-201ENST00000346569 LPAP08519 4548 aa5.87□□□□□ -1.47
ECM1-201ENST00000346569 LOC101927531A0A1B0GV80 90 aa5.86□□□□□ -1.47
ECM1-201ENST00000346569 RPL37P61927 97 aaKnown RBP5.86□□□□□ -1.47
ECM1-201ENST00000346569 LCE2CQ5TA81 110 aa5.86□□□□□ -1.47
ECM1-201ENST00000346569 IGKV2-30P06310 120 aa5.85□□□□□ -1.47
ECM1-201ENST00000346569 CYP4F30PQ9H0H9 118 aa5.85□□□□□ -1.47
ECM1-201ENST00000346569 RNF213Q63HN8 5207 aa5.85□□□□□ -1.47
ECM1-201ENST00000346569 ATP11AUNQ6ZP68 121 aa5.81□□□□□ -1.48
ECM1-201ENST00000346569 TMEM258P61165 79 aa5.8□□□□□ -1.48
ECM1-201ENST00000346569 IGKV2D-30A0A075B6S6 120 aa5.78□□□□□ -1.48
ECM1-201ENST00000346569 PCOTHQ58A44 107 aa5.78□□□□□ -1.48
ECM1-201ENST00000346569 H3BS24 57 aa5.77□□□□□ -1.49
ECM1-201ENST00000346569 SPANXA2-OT1Q8N9U9 137 aa5.77□□□□□ -1.49
ECM1-201ENST00000346569 LCE2AQ5TA79 106 aaPredicted RBP5.76□□□□□ -1.49
ECM1-201ENST00000346569 C7orf65Q6ZTY9 151 aa5.76□□□□□ -1.49
ECM1-201ENST00000346569 SPINK7P58062 85 aa5.75□□□□□ -1.49
ECM1-201ENST00000346569 SVIPQ8NHG7 77 aa5.75□□□□□ -1.49
ECM1-201ENST00000346569 HRES1P13985 223 aa5.74□□□□□ -1.49
ECM1-201ENST00000346569 FAM236DA0A1B0GTK5 79 aa5.73□□□□□ -1.49
ECM1-201ENST00000346569 FAM236CP0DP71 79 aa5.73□□□□□ -1.49
ECM1-201ENST00000346569 ATP5EP56381 51 aaPredicted RBP5.72□□□□□ -1.49
ECM1-201ENST00000346569 MUC17Q685J3 4493 aa5.71□□□□□ -1.5
ECM1-201ENST00000346569 LORP23490 312 aaPredicted RBP5.7□□□□□ -1.5
ECM1-201ENST00000346569 MUC2Q02817 5179 aa5.7□□□□□ -1.5
ECM1-201ENST00000346569 SEC61BP60468 96 aaKnown RBP5.68□□□□□ -1.5
ECM1-201ENST00000346569 C4orf26Q17RF5 130 aa5.65□□□□□ -1.5
ECM1-201ENST00000346569 RPS28P62857 69 aaKnown RBP5.65□□□□□ -1.51
ECM1-201ENST00000346569 DMAC1Q96GE9 116 aa5.65□□□□□ -1.51
ECM1-201ENST00000346569 KRTAP3-1Q9BYR8 98 aa5.65□□□□□ -1.51
ECM1-201ENST00000346569 SERP1Q9Y6X1 66 aa5.64□□□□□ -1.51
ECM1-201ENST00000346569 MPLKIPQ8TAP9 179 aa5.63□□□□□ -1.51
ECM1-201ENST00000346569 KRTAP4-1Q9BYQ7 146 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms