RNA–Protein interactions for RNA: ENST00000343225.4

SLC12A2-202, Transcript of solute carrier family 12 member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLC12A2, Length 5,509 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A2-202ENST00000343225 NIPBLQ6KC79 2804 aaeCLIP13.12□□□□□ -0.31
SLC12A2-202ENST00000343225 KRTAP10-8P60410 259 aa13.1□□□□□ -0.31
SLC12A2-202ENST00000343225 ATMQ13315 3056 aa13.08□□□□□ -0.32
SLC12A2-202ENST00000343225 UNC80Q8N2C7 3258 aa13.06□□□□□ -0.32
SLC12A2-202ENST00000343225 KRTAP13-3Q3SY46 172 aa13.04□□□□□ -0.32
SLC12A2-202ENST00000343225 TACC2O95359 2948 aa13.04□□□□□ -0.32
SLC12A2-202ENST00000343225 LRBAP50851 2863 aa13.02□□□□□ -0.33
SLC12A2-202ENST00000343225 P0C880 135 aa13.02□□□□□ -0.33
SLC12A2-202ENST00000343225 XIRP2A4UGR9 3374 aa13.01□□□□□ -0.33
SLC12A2-202ENST00000343225 COL12A1Q99715 3063 aa12.97□□□□□ -0.33
SLC12A2-202ENST00000343225 A0A1B0GVY2 172 aa12.97□□□□□ -0.33
SLC12A2-202ENST00000343225 TENM4Q6N022 2769 aa12.97□□□□□ -0.33
SLC12A2-202ENST00000343225 PRO2289Q9P1D8 64 aa12.87□□□□□ -0.35
SLC12A2-202ENST00000343225 ADGRG4Q8IZF6 3080 aa12.83□□□□□ -0.36
SLC12A2-202ENST00000343225 KRTAP10-10P60014 251 aa12.83□□□□□ -0.36
SLC12A2-202ENST00000343225 CDH23Q9H251 3354 aa12.83□□□□□ -0.36
SLC12A2-202ENST00000343225 LAMA1P25391 3075 aa12.81□□□□□ -0.36
SLC12A2-202ENST00000343225 FRYLO94915 3013 aa12.78□□□□□ -0.36
SLC12A2-202ENST00000343225 DMXL2Q8TDJ6 3036 aa12.78□□□□□ -0.36
SLC12A2-202ENST00000343225 ASH1LQ9NR48 2969 aaKnown RBP12.77□□□□□ -0.36
SLC12A2-202ENST00000343225 CELSR3Q9NYQ7 3312 aa12.76□□□□□ -0.37
SLC12A2-202ENST00000343225 EYSQ5T1H1 3165 aa12.7□□□□□ -0.38
SLC12A2-202ENST00000343225 FREM2Q5SZK8 3169 aa12.7□□□□□ -0.38
SLC12A2-202ENST00000343225 NBEAQ8NFP9 2946 aa12.7□□□□□ -0.38
SLC12A2-202ENST00000343225 CELSR2Q9HCU4 2923 aa12.69□□□□□ -0.38
SLC12A2-202ENST00000343225 ZZEF1O43149 2961 aa12.65□□□□□ -0.38
SLC12A2-202ENST00000343225 CRYBG3Q68DQ2 2970 aa12.61□□□□□ -0.39
SLC12A2-202ENST00000343225 BOD1L1Q8NFC6 3051 aa12.6□□□□□ -0.39
SLC12A2-202ENST00000343225 DCHS2Q6V1P9 2916 aa12.6□□□□□ -0.39
SLC12A2-202ENST00000343225 SZT2Q5T011 3432 aa12.57□□□□□ -0.4
SLC12A2-202ENST00000343225 REV3LO60673 3130 aa12.55□□□□□ -0.4
SLC12A2-202ENST00000343225 COL6A3P12111 3177 aa12.54□□□□□ -0.4
SLC12A2-202ENST00000343225 VCANP13611 3396 aa12.54□□□□□ -0.4
SLC12A2-202ENST00000343225 HRNRQ86YZ3 2850 aaPredicted RBP12.54□□□□□ -0.4
SLC12A2-202ENST00000343225 ZANQ9Y493 2812 aa12.49□□□□□ -0.41
SLC12A2-202ENST00000343225 DNAH14Q0VDD8 3507 aa12.36□□□□□ -0.43
SLC12A2-202ENST00000343225 KRTAP12-2P59991 146 aa12.35□□□□□ -0.43
SLC12A2-202ENST00000343225 KRTAP13-4Q3LI77 160 aa12.31□□□□□ -0.44
SLC12A2-202ENST00000343225 TENM1Q9UKZ4 2725 aa12.3□□□□□ -0.44
SLC12A2-202ENST00000343225 NF1P21359 2839 aa12.28□□□□□ -0.44
SLC12A2-202ENST00000343225 TNRC18O15417 2968 aaPredicted RBP12.27□□□□□ -0.44
SLC12A2-202ENST00000343225 TENM3Q9P273 2699 aa12.25□□□□□ -0.45
SLC12A2-202ENST00000343225 TENM2Q9NT68 2774 aa12.25□□□□□ -0.45
SLC12A2-202ENST00000343225 TGP01266 2768 aa12.23□□□□□ -0.45
SLC12A2-202ENST00000343225 CFAP47Q6ZTR5 3102 aa12.23□□□□□ -0.45
SLC12A2-202ENST00000343225 KRTAP12-1P59990 96 aa12.19□□□□□ -0.46
SLC12A2-202ENST00000343225 USP34Q70CQ2 3546 aa12.18□□□□□ -0.46
SLC12A2-202ENST00000343225 FBN2P35556 2912 aa12.16□□□□□ -0.46
SLC12A2-202ENST00000343225 KRTAP3-1Q9BYR8 98 aa12.12□□□□□ -0.47
SLC12A2-202ENST00000343225 DMXL1Q9Y485 3027 aa12.04□□□□□ -0.48
SLC12A2-202ENST00000343225 CELSR1Q9NYQ6 3014 aa12.04□□□□□ -0.48
SLC12A2-202ENST00000343225 MXRA5Q9NR99 2828 aa12□□□□□ -0.49
SLC12A2-202ENST00000343225 SPTBN5Q9NRC6 3674 aaKnown RBP11.99□□□□□ -0.49
SLC12A2-202ENST00000343225 SPEGQ15772 3267 aa11.83□□□□□ -0.52
SLC12A2-202ENST00000343225 KRTAP10-6P60371 365 aaPredicted RBP11.82□□□□□ -0.52
SLC12A2-202ENST00000343225 PDZD2O15018 2839 aa11.74□□□□□ -0.53
SLC12A2-202ENST00000343225 KRTAP15-1Q3LI76 137 aa11.69□□□□□ -0.54
SLC12A2-202ENST00000343225 LOC400499M0QZD8 3231 aa11.67□□□□□ -0.54
SLC12A2-202ENST00000343225 PKD1L1Q8TDX9 2849 aa11.57□□□□□ -0.56
SLC12A2-202ENST00000343225 MT1HL1P0DM35 61 aa11.55□□□□□ -0.56
SLC12A2-202ENST00000343225 VWFP04275 2813 aa11.42□□□□□ -0.58
SLC12A2-202ENST00000343225 KRTAP3-2Q9BYR7 98 aa11.39□□□□□ -0.59
SLC12A2-202ENST00000343225 INE1O15225 51 aa11.38□□□□□ -0.59
SLC12A2-202ENST00000343225 KRTAP3-3Q9BYR6 98 aa11.36□□□□□ -0.59
SLC12A2-202ENST00000343225 ANK3Q12955 4377 aaKnown RBP11.33□□□□□ -0.6
SLC12A2-202ENST00000343225 WDFY3Q8IZQ1 3526 aa11.29□□□□□ -0.6
SLC12A2-202ENST00000343225 OTOGQ6ZRI0 2925 aa11.29□□□□□ -0.6
SLC12A2-202ENST00000343225 KRTAP10-4P60372 401 aaPredicted RBP11.27□□□□□ -0.61
SLC12A2-202ENST00000343225 KRTAP10-12P60413 245 aa11.22□□□□□ -0.61
SLC12A2-202ENST00000343225 MYO15AQ9UKN7 3530 aa11.22□□□□□ -0.61
SLC12A2-202ENST00000343225 RELNP78509 3460 aa11.21□□□□□ -0.61
SLC12A2-202ENST00000343225 DCHS1Q96JQ0 3298 aa11.14□□□□□ -0.63
SLC12A2-202ENST00000343225 KRTAP23-1A1A580 65 aa11.13□□□□□ -0.63
SLC12A2-202ENST00000343225 FBN3Q75N90 2809 aa11.09□□□□□ -0.63
SLC12A2-202ENST00000343225 NBPF19A0A087WUL8 3843 aa11.09□□□□□ -0.63
SLC12A2-202ENST00000343225 FBN1P35555 2871 aaKnown RBP11.04□□□□□ -0.64
SLC12A2-202ENST00000343225 MEGF8Q7Z7M0 2845 aa11.01□□□□□ -0.65
SLC12A2-202ENST00000343225 KRTAP12-3P60328 96 aa10.91□□□□□ -0.66
SLC12A2-202ENST00000343225 KRTAP4-5Q9BYR2 181 aa10.9□□□□□ -0.66
SLC12A2-202ENST00000343225 ASPMQ8IZT6 3477 aa10.89□□□□□ -0.67
SLC12A2-202ENST00000343225 ALMS1Q8TCU4 4167 aa10.86□□□□□ -0.67
SLC12A2-202ENST00000343225 HUWE1Q7Z6Z7 4374 aaKnown RBP10.82□□□□□ -0.68
SLC12A2-202ENST00000343225 SRRM2Q9UQ35 2752 aaKnown RBP10.73□□□□□ -0.69
SLC12A2-202ENST00000343225 LCE3AQ5TA76 89 aa10.72□□□□□ -0.69
SLC12A2-202ENST00000343225 ZFHX4Q86UP3 3567 aa10.72□□□□□ -0.69
SLC12A2-202ENST00000343225 CRCT1Q9UGL9 99 aa10.69□□□□□ -0.7
SLC12A2-202ENST00000343225 COL7A1Q02388 2944 aa10.65□□□□□ -0.7
SLC12A2-202ENST00000343225 LAMA5O15230 3695 aa10.64□□□□□ -0.71
SLC12A2-202ENST00000343225 CSMD1Q96PZ7 3565 aa10.63□□□□□ -0.71
SLC12A2-202ENST00000343225 ZFHX3Q15911 3703 aa10.63□□□□□ -0.71
SLC12A2-202ENST00000343225 LORP23490 312 aaPredicted RBP10.56□□□□□ -0.72
SLC12A2-202ENST00000343225 TRRAPQ9Y4A5 3859 aa10.52□□□□□ -0.72
SLC12A2-202ENST00000343225 SMG1Q96Q15 3661 aaKnown RBP10.43□□□□□ -0.74
SLC12A2-202ENST00000343225 KRTAP8-1Q8IUC2 63 aa10.3□□□□□ -0.76
SLC12A2-202ENST00000343225 CUBNO60494 3623 aa10.26□□□□□ -0.77
SLC12A2-202ENST00000343225 CSMD2Q7Z408 3487 aa10.22□□□□□ -0.77
SLC12A2-202ENST00000343225 DNAH2Q9P225 4427 aa10.2□□□□□ -0.78
SLC12A2-202ENST00000343225 DMDP11532 3685 aa10.19□□□□□ -0.78
SLC12A2-202ENST00000343225 DNAH9Q9NYC9 4486 aa10.19□□□□□ -0.78
SLC12A2-202ENST00000343225 DNAH5Q8TE73 4624 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms