RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 SPAG11AQ6PDA7 123 aa5.89□□□□□ -1.47
TPM3-207ENST00000341372 ST20-AS1Q8NBB2 130 aa5.89□□□□□ -1.47
TPM3-207ENST00000341372 ORMDL1Q9P0S3 153 aa5.89□□□□□ -1.47
TPM3-207ENST00000341372 Q6ZQY7 126 aa5.89□□□□□ -1.47
TPM3-207ENST00000341372 A8MUN3 132 aa5.87□□□□□ -1.47
TPM3-207ENST00000341372 BPY2O14599 106 aa5.87□□□□□ -1.47
TPM3-207ENST00000341372 SSBP3-AS1Q7Z2R9 100 aa5.87□□□□□ -1.47
TPM3-207ENST00000341372 LPAP08519 4548 aa5.87□□□□□ -1.47
TPM3-207ENST00000341372 MOBPQ13875 183 aa5.87□□□□□ -1.47
TPM3-207ENST00000341372 J3QR89 54 aa5.86□□□□□ -1.47
TPM3-207ENST00000341372 TMEM256-PLSCR3K7ERE1 68 aa5.86□□□□□ -1.47
TPM3-207ENST00000341372 LCE5AQ5TCM9 118 aa5.86□□□□□ -1.47
TPM3-207ENST00000341372 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.86□□□□□ -1.47
TPM3-207ENST00000341372 IGLV5-48A0A075B6I7 105 aa5.85□□□□□ -1.47
TPM3-207ENST00000341372 RPS29P62273 56 aaKnown RBP5.84□□□□□ -1.47
TPM3-207ENST00000341372 C14orf132Q9NPU4 83 aa5.84□□□□□ -1.47
TPM3-207ENST00000341372 SPINK1P00995 79 aa5.84□□□□□ -1.48
TPM3-207ENST00000341372 Q8N9P0 234 aaPredicted RBP5.84□□□□□ -1.48
TPM3-207ENST00000341372 KRTAP9-9Q9BYP9 154 aa5.83□□□□□ -1.48
TPM3-207ENST00000341372 C9orf153Q5TBE3 101 aa5.82□□□□□ -1.48
TPM3-207ENST00000341372 RETNLBQ9BQ08 111 aa5.82□□□□□ -1.48
TPM3-207ENST00000341372 LAMTOR3Q9UHA4 124 aa5.82□□□□□ -1.48
TPM3-207ENST00000341372 SNCGO76070 127 aa5.81□□□□□ -1.48
TPM3-207ENST00000341372 LCE4AQ5TA78 99 aa5.81□□□□□ -1.48
TPM3-207ENST00000341372 FP248Q71RG6 208 aaPredicted RBP5.8□□□□□ -1.48
TPM3-207ENST00000341372 JMJD7-PLA2G4BH0Y9G9 81 aa5.79□□□□□ -1.48
TPM3-207ENST00000341372 ADM2Q7Z4H4 148 aa5.79□□□□□ -1.48
TPM3-207ENST00000341372 DEFB105AQ8NG35 78 aa5.79□□□□□ -1.48
TPM3-207ENST00000341372 TPRXLQ17RH7 258 aa5.79□□□□□ -1.48
TPM3-207ENST00000341372 H3BQ85 93 aa5.78□□□□□ -1.48
TPM3-207ENST00000341372 MT-ATP8P03928 68 aa5.78□□□□□ -1.48
TPM3-207ENST00000341372 CCKP06307 115 aa5.78□□□□□ -1.48
TPM3-207ENST00000341372 Q6ZQT0 140 aa5.78□□□□□ -1.48
TPM3-207ENST00000341372 LOC110117498A0A087WWA1 95 aa5.77□□□□□ -1.49
TPM3-207ENST00000341372 TRBV7-4A0A0J9YYF1 115 aa5.77□□□□□ -1.49
TPM3-207ENST00000341372 LOC100996750A0A140TA64 210 aa5.77□□□□□ -1.49
TPM3-207ENST00000341372 RBM3P98179 157 aaKnown RBP5.77□□□□□ -1.49
TPM3-207ENST00000341372 KRTAP4-6Q9BYQ5 205 aa5.77□□□□□ -1.49
TPM3-207ENST00000341372 RNF213Q63HN8 5207 aa5.77□□□□□ -1.49
TPM3-207ENST00000341372 LINC00846Q9NV44 126 aa5.76□□□□□ -1.49
TPM3-207ENST00000341372 ACYP1P07311 99 aa5.75□□□□□ -1.49
TPM3-207ENST00000341372 Q6Q795 121 aa5.75□□□□□ -1.49
TPM3-207ENST00000341372 LIMD2Q9BT23 127 aa5.73□□□□□ -1.49
TPM3-207ENST00000341372 MUC17Q685J3 4493 aa5.73□□□□□ -1.49
TPM3-207ENST00000341372 Q5XG85 94 aa5.72□□□□□ -1.49
TPM3-207ENST00000341372 KRTAP13-3Q3SY46 172 aa5.72□□□□□ -1.49
TPM3-207ENST00000341372 DSCR8Q96T75 97 aa5.72□□□□□ -1.49
TPM3-207ENST00000341372 F8WEM9 126 aa5.71□□□□□ -1.5
TPM3-207ENST00000341372 RPS28P62857 69 aaKnown RBP5.7□□□□□ -1.5
TPM3-207ENST00000341372 HRCT1Q6UXD1 115 aa5.7□□□□□ -1.5
TPM3-207ENST00000341372 A0A0G2JQZ4 141 aa5.7□□□□□ -1.5
TPM3-207ENST00000341372 Q6JHZ5 121 aa5.7□□□□□ -1.5
TPM3-207ENST00000341372 A0A1W2PNM2 257 aa5.69□□□□□ -1.5
TPM3-207ENST00000341372 J3KT08 172 aa5.69□□□□□ -1.5
TPM3-207ENST00000341372 PDE6GP18545 87 aa5.69□□□□□ -1.5
TPM3-207ENST00000341372 LINC00643Q86TS7 51 aa5.69□□□□□ -1.5
TPM3-207ENST00000341372 A8MWP4 228 aa5.68□□□□□ -1.5
TPM3-207ENST00000341372 IGFL1Q6UW32 110 aa5.67□□□□□ -1.5
TPM3-207ENST00000341372 TRBV7-7A0A0K0K1E9 115 aa5.67□□□□□ -1.5
TPM3-207ENST00000341372 K7ERS5 55 aa5.66□□□□□ -1.5
TPM3-207ENST00000341372 KRTAP19-1Q8IUB9 90 aa5.65□□□□□ -1.5
TPM3-207ENST00000341372 IGKV3D-7A0A0C4DH55 119 aa5.64□□□□□ -1.51
TPM3-207ENST00000341372 A6NED7 52 aa5.64□□□□□ -1.51
TPM3-207ENST00000341372 ASB16-AS1Q495Z4 193 aa5.64□□□□□ -1.51
TPM3-207ENST00000341372 MUC2Q02817 5179 aa5.63□□□□□ -1.51
TPM3-207ENST00000341372 KTN1-AS1Q86SY8 53 aa5.63□□□□□ -1.51
TPM3-207ENST00000341372 IMUPQ9GZP8 106 aa5.62□□□□□ -1.51
TPM3-207ENST00000341372 UBL5Q9BZL1 73 aa5.61□□□□□ -1.51
TPM3-207ENST00000341372 CCDC179H3BU77 68 aa5.6□□□□□ -1.51
TPM3-207ENST00000341372 DEFB116Q30KQ4 102 aa5.6□□□□□ -1.51
TPM3-207ENST00000341372 LCA10Q71F78 164 aa5.59□□□□□ -1.51
TPM3-207ENST00000341372 A0A1B0GW54 56 aa5.58□□□□□ -1.52
TPM3-207ENST00000341372 A0A087WVE0 104 aa5.58□□□□□ -1.52
TPM3-207ENST00000341372 HIST1H4AP62805 103 aaKnown RBP5.57□□□□□ -1.52
TPM3-207ENST00000341372 NREPQ16612 68 aa5.56□□□□□ -1.52
TPM3-207ENST00000341372 ATP5EP2Q5VTU8 51 aa5.56□□□□□ -1.52
TPM3-207ENST00000341372 Q5W150 140 aa5.56□□□□□ -1.52
TPM3-207ENST00000341372 C9orf92A6NGG3 77 aa5.55□□□□□ -1.52
TPM3-207ENST00000341372 A8MUU9 505 aa5.55□□□□□ -1.52
TPM3-207ENST00000341372 A0A087WSZ3 146 aa5.55□□□□□ -1.52
TPM3-207ENST00000341372 FAM236AA0A1B0GUQ0 79 aa5.54□□□□□ -1.52
TPM3-207ENST00000341372 FAM236BA0A1B0GV22 79 aa5.54□□□□□ -1.52
TPM3-207ENST00000341372 KRTAP9-3Q9BYQ3 159 aa5.54□□□□□ -1.52
TPM3-207ENST00000341372 Q8N9L7 120 aa5.53□□□□□ -1.52
TPM3-207ENST00000341372 SPANXA2-OT1Q8N9U9 137 aa5.53□□□□□ -1.52
TPM3-207ENST00000341372 DSCR10P59022 87 aa5.53□□□□□ -1.52
TPM3-207ENST00000341372 PRR15Q8IV56 129 aa5.53□□□□□ -1.52
TPM3-207ENST00000341372 IGKV4-1P06312 121 aa5.52□□□□□ -1.53
TPM3-207ENST00000341372 Q96NJ1 140 aa5.52□□□□□ -1.53
TPM3-207ENST00000341372 KRTAP4-1Q9BYQ7 146 aa5.52□□□□□ -1.53
TPM3-207ENST00000341372 LINC00472Q9H8W2 130 aa5.51□□□□□ -1.53
TPM3-207ENST00000341372 FAT4Q6V0I7 4981 aa5.51□□□□□ -1.53
TPM3-207ENST00000341372 RPL37P61927 97 aaKnown RBP5.5□□□□□ -1.53
TPM3-207ENST00000341372 LINC01554Q52M75 96 aa5.5□□□□□ -1.53
TPM3-207ENST00000341372 K7EQZ3 153 aa5.47□□□□□ -1.53
TPM3-207ENST00000341372 PCOTHQ58A44 107 aa5.47□□□□□ -1.53
TPM3-207ENST00000341372 ATOX1O00244 68 aa5.43□□□□□ -1.54
TPM3-207ENST00000341372 C20orf166-AS1Q96NR2 134 aa5.42□□□□□ -1.54
TPM3-207ENST00000341372 KRTAP19-2Q3LHN2 52 aa5.4□□□□□ -1.55
TPM3-207ENST00000341372 COX7CP15954 63 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms