RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 H0Y9J4 135 aa7.25□□□□□ -1.25
RTN3-203ENST00000341307 SPATA8Q6RVD6 105 aa7.25□□□□□ -1.25
RTN3-203ENST00000341307 IGKV2-24A0A0C4DH68 120 aa7.24□□□□□ -1.25
RTN3-203ENST00000341307 DYNC2H1Q8NCM8 4307 aaKnown RBP7.24□□□□□ -1.25
RTN3-203ENST00000341307 LINC00472Q9H8W2 130 aa7.23□□□□□ -1.25
RTN3-203ENST00000341307 KRTAP7-1Q8IUC3 87 aa7.23□□□□□ -1.25
RTN3-203ENST00000341307 TLX1NBP0CAT3 122 aa7.22□□□□□ -1.25
RTN3-203ENST00000341307 C1orf134Q5TEV5 83 aa7.22□□□□□ -1.25
RTN3-203ENST00000341307 IGLV8-61A0A075B6I0 122 aa7.21□□□□□ -1.26
RTN3-203ENST00000341307 RYR2Q92736 4967 aa7.21□□□□□ -1.26
RTN3-203ENST00000341307 NUPR2A6NF83 97 aa7.19□□□□□ -1.26
RTN3-203ENST00000341307 PLA2G2DQ9UNK4 145 aa7.19□□□□□ -1.26
RTN3-203ENST00000341307 A0A096LNI7 61 aa7.17□□□□□ -1.26
RTN3-203ENST00000341307 NBDYA0A0U1RRE5 68 aa7.17□□□□□ -1.26
RTN3-203ENST00000341307 TP53AIP1Q9HCN2 124 aa7.17□□□□□ -1.26
RTN3-203ENST00000341307 VPS13DQ5THJ4 4388 aa7.16□□□□□ -1.26
RTN3-203ENST00000341307 LY6G6CO95867 125 aa7.16□□□□□ -1.26
RTN3-203ENST00000341307 CHTF8P0CG12 524 aa7.15□□□□□ -1.27
RTN3-203ENST00000341307 FRAS1Q86XX4 4008 aa7.14□□□□□ -1.27
RTN3-203ENST00000341307 ROMO1P60602 79 aa7.13□□□□□ -1.27
RTN3-203ENST00000341307 MIR22HGQ0VDD5 57 aa7.13□□□□□ -1.27
RTN3-203ENST00000341307 ZNF861PO60384 105 aa7.12□□□□□ -1.27
RTN3-203ENST00000341307 A0A1B0GU69 56 aa7.11□□□□□ -1.27
RTN3-203ENST00000341307 Q6ZRN7 208 aaPredicted RBP7.11□□□□□ -1.27
RTN3-203ENST00000341307 DNAH2Q9P225 4427 aa7.11□□□□□ -1.27
RTN3-203ENST00000341307 REG3GQ6UW15 175 aa7.1□□□□□ -1.27
RTN3-203ENST00000341307 PRLHP81277 87 aa7.08□□□□□ -1.28
RTN3-203ENST00000341307 IGHV6-1A0A0B4J1U7 121 aa7.07□□□□□ -1.28
RTN3-203ENST00000341307 PANO1I0J062 215 aa7.07□□□□□ -1.28
RTN3-203ENST00000341307 UQCR11O14957 56 aa7.07□□□□□ -1.28
RTN3-203ENST00000341307 KRTAP11-1Q8IUC1 163 aa7.07□□□□□ -1.28
RTN3-203ENST00000341307 C14orf177Q52M58 125 aa7.07□□□□□ -1.28
RTN3-203ENST00000341307 ACYP2P14621 99 aa7.06□□□□□ -1.28
RTN3-203ENST00000341307 C8orf17Q9NRJ1 99 aa7.06□□□□□ -1.28
RTN3-203ENST00000341307 EPPK1P58107 5090 aaKnown RBP7.06□□□□□ -1.28
RTN3-203ENST00000341307 Q96NJ1 140 aa7.05□□□□□ -1.28
RTN3-203ENST00000341307 A0A0A0MQY5 61 aa7.04□□□□□ -1.28
RTN3-203ENST00000341307 SRRM2Q9UQ35 2752 aaKnown RBP7.04□□□□□ -1.28
RTN3-203ENST00000341307 A0A087WTM6 91 aa7.02□□□□□ -1.29
RTN3-203ENST00000341307 KRTAP25-1Q3LHN0 102 aa7.02□□□□□ -1.29
RTN3-203ENST00000341307 P0C880 135 aa7.01□□□□□ -1.29
RTN3-203ENST00000341307 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.01□□□□□ -1.29
RTN3-203ENST00000341307 DMAC1Q96GE9 116 aa6.99□□□□□ -1.29
RTN3-203ENST00000341307 MRPL34Q9BQ48 92 aaKnown RBP6.99□□□□□ -1.29
RTN3-203ENST00000341307 Q5W150 140 aa6.98□□□□□ -1.29
RTN3-203ENST00000341307 SPRR1BP22528 89 aa6.98□□□□□ -1.29
RTN3-203ENST00000341307 KRTAP13-3Q3SY46 172 aa6.97□□□□□ -1.29
RTN3-203ENST00000341307 FAT2Q9NYQ8 4349 aa6.97□□□□□ -1.29
RTN3-203ENST00000341307 NOTCH2NLQ7Z3S9 236 aa6.96□□□□□ -1.3
RTN3-203ENST00000341307 SPACA4Q8TDM5 124 aa6.95□□□□□ -1.3
RTN3-203ENST00000341307 HECTD4Q9Y4D8 3996 aa6.95□□□□□ -1.3
RTN3-203ENST00000341307 A0A1B0GVX0 72 aa6.95□□□□□ -1.3
RTN3-203ENST00000341307 PKHD1P08F94 4074 aa6.94□□□□□ -1.3
RTN3-203ENST00000341307 DNAH17Q9UFH2 4485 aa6.93□□□□□ -1.3
RTN3-203ENST00000341307 IGLV5-52A0A0A0MRZ9 124 aa6.93□□□□□ -1.3
RTN3-203ENST00000341307 PKD1P98161 4303 aa6.92□□□□□ -1.3
RTN3-203ENST00000341307 DNAH6Q9C0G6 4158 aa6.91□□□□□ -1.3
RTN3-203ENST00000341307 A8MUU9 505 aa6.9□□□□□ -1.3
RTN3-203ENST00000341307 DNAH11Q96DT5 4516 aa6.9□□□□□ -1.3
RTN3-203ENST00000341307 IGLV7-43P04211 117 aa6.88□□□□□ -1.31
RTN3-203ENST00000341307 KRTAP10-2P60368 255 aa6.87□□□□□ -1.31
RTN3-203ENST00000341307 DNAH8Q96JB1 4490 aa6.87□□□□□ -1.31
RTN3-203ENST00000341307 KRTAP13-1Q8IUC0 172 aa6.87□□□□□ -1.31
RTN3-203ENST00000341307 LINC00304Q8N9R0 145 aa6.86□□□□□ -1.31
RTN3-203ENST00000341307 LINC00483Q53H64 154 aa6.86□□□□□ -1.31
RTN3-203ENST00000341307 PSORS1C2Q9UIG4 136 aa6.85□□□□□ -1.31
RTN3-203ENST00000341307 KIAA1109Q2LD37 5005 aa6.84□□□□□ -1.32
RTN3-203ENST00000341307 DNAH5Q8TE73 4624 aa6.83□□□□□ -1.32
RTN3-203ENST00000341307 DYNC1H1Q14204 4646 aaKnown RBP6.82□□□□□ -1.32
RTN3-203ENST00000341307 CDK2AP2O75956 126 aa6.82□□□□□ -1.32
RTN3-203ENST00000341307 ANAPC11Q9NYG5 84 aa6.81□□□□□ -1.32
RTN3-203ENST00000341307 IGLV9-49A0A0B4J1Y8 123 aa6.8□□□□□ -1.32
RTN3-203ENST00000341307 LRP1BQ9NZR2 4599 aa6.8□□□□□ -1.32
RTN3-203ENST00000341307 A0A1B0GVY2 172 aa6.79□□□□□ -1.32
RTN3-203ENST00000341307 BIRC6Q9NR09 4857 aa6.78□□□□□ -1.32
RTN3-203ENST00000341307 CIRBP-AS1Q8TBR5 109 aa6.78□□□□□ -1.32
RTN3-203ENST00000341307 H0YAA0 97 aa6.77□□□□□ -1.33
RTN3-203ENST00000341307 CRIPTQ9P021 101 aa6.77□□□□□ -1.33
RTN3-203ENST00000341307 KRTAP10-1P60331 282 aa6.76□□□□□ -1.33
RTN3-203ENST00000341307 IGKV2-30P06310 120 aa6.73□□□□□ -1.33
RTN3-203ENST00000341307 FLG2Q5D862 2391 aaPredicted RBP6.73□□□□□ -1.33
RTN3-203ENST00000341307 FAM229AH3BQW9 127 aa6.72□□□□□ -1.33
RTN3-203ENST00000341307 Q6ZSA8 131 aa6.72□□□□□ -1.33
RTN3-203ENST00000341307 APOBP04114 4563 aaKnown RBP6.7□□□□□ -1.34
RTN3-203ENST00000341307 NDUFAF8A1L188 74 aa6.69□□□□□ -1.34
RTN3-203ENST00000341307 RYR1P21817 5038 aa6.69□□□□□ -1.34
RTN3-203ENST00000341307 SPINK6Q6UWN8 80 aa6.68□□□□□ -1.34
RTN3-203ENST00000341307 FAT1Q14517 4588 aa6.68□□□□□ -1.34
RTN3-203ENST00000341307 C20orf166-AS1Q96NR2 134 aa6.67□□□□□ -1.34
RTN3-203ENST00000341307 KRTAP17-1Q9BYP8 105 aa6.67□□□□□ -1.34
RTN3-203ENST00000341307 KRTAP16-1A8MUX0 517 aa6.67□□□□□ -1.34
RTN3-203ENST00000341307 HSPG2P98160 4391 aa6.65□□□□□ -1.34
RTN3-203ENST00000341307 SSBP3-AS1Q7Z2R9 100 aa6.64□□□□□ -1.35
RTN3-203ENST00000341307 SPINK1P00995 79 aa6.63□□□□□ -1.35
RTN3-203ENST00000341307 SPINT4Q6UDR6 99 aa6.61□□□□□ -1.35
RTN3-203ENST00000341307 HERC2O95714 4834 aa6.61□□□□□ -1.35
RTN3-203ENST00000341307 IGKV2D-30A0A075B6S6 120 aa6.6□□□□□ -1.35
RTN3-203ENST00000341307 KRTAP15-1Q3LI76 137 aa6.6□□□□□ -1.35
RTN3-203ENST00000341307 VPS13BQ7Z7G8 4022 aa6.59□□□□□ -1.35
RTN3-203ENST00000341307 SMR3BP02814 79 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms