RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 FSIP2Q5CZC0 6907 aa8.08□□□□□ -1.12
VAPA-201ENST00000340541 C9orf118A6NHY6 69 aa8.08□□□□□ -1.12
VAPA-201ENST00000340541 JMJD7-PLA2G4BH0Y9G9 81 aa8.07□□□□□ -1.12
VAPA-201ENST00000340541 ATP11AUNQ6ZP68 121 aa8.06□□□□□ -1.12
VAPA-201ENST00000340541 Q6ZQT0 140 aa8.06□□□□□ -1.12
VAPA-201ENST00000340541 LOC110117498A0A087WWA1 95 aa8.05□□□□□ -1.12
VAPA-201ENST00000340541 KRTAP16-1A8MUX0 517 aa8.05□□□□□ -1.12
VAPA-201ENST00000340541 NOTCH2NLQ7Z3S9 236 aa8.05□□□□□ -1.12
VAPA-201ENST00000340541 A0A1W2PPM0 123 aa8.04□□□□□ -1.12
VAPA-201ENST00000340541 LINC00313P59037 77 aa8.04□□□□□ -1.12
VAPA-201ENST00000340541 C21orf62-AS1Q17RA5 79 aa8.02□□□□□ -1.13
VAPA-201ENST00000340541 C14orf132Q9NPU4 83 aa8.02□□□□□ -1.13
VAPA-201ENST00000340541 KRTAP10-6P60371 365 aaPredicted RBP8.01□□□□□ -1.13
VAPA-201ENST00000340541 PDE6GP18545 87 aa8□□□□□ -1.13
VAPA-201ENST00000340541 IGHV6-1A0A0B4J1U7 121 aa7.99□□□□□ -1.13
VAPA-201ENST00000340541 A0A1B0GW54 56 aa7.99□□□□□ -1.13
VAPA-201ENST00000340541 A0A1B0GVX0 72 aa7.98□□□□□ -1.13
VAPA-201ENST00000340541 H3BT86 120 aa7.98□□□□□ -1.13
VAPA-201ENST00000340541 MTURNQ8N3F0 131 aa7.98□□□□□ -1.13
VAPA-201ENST00000340541 M0R2T5 61 aa7.97□□□□□ -1.13
VAPA-201ENST00000340541 J3KT08 172 aa7.96□□□□□ -1.14
VAPA-201ENST00000340541 KRTAP4-8Q9BYQ9 185 aa7.96□□□□□ -1.14
VAPA-201ENST00000340541 COX6B2Q6YFQ2 88 aa7.95□□□□□ -1.14
VAPA-201ENST00000340541 C8orf87E5RJ46 101 aa7.94□□□□□ -1.14
VAPA-201ENST00000340541 COL5A1-AS1Q5SY13 56 aa7.94□□□□□ -1.14
VAPA-201ENST00000340541 SPCS1Q9Y6A9 102 aa7.93□□□□□ -1.14
VAPA-201ENST00000340541 FLGP20930 4061 aaPredicted RBP7.93□□□□□ -1.14
VAPA-201ENST00000340541 A8MWP4 228 aa7.89□□□□□ -1.15
VAPA-201ENST00000340541 IGKV3D-7A0A0C4DH55 119 aa7.88□□□□□ -1.15
VAPA-201ENST00000340541 NDUFB1O75438 58 aa7.87□□□□□ -1.15
VAPA-201ENST00000340541 NREPQ16612 68 aa7.86□□□□□ -1.15
VAPA-201ENST00000340541 C8orf17Q9NRJ1 99 aa7.85□□□□□ -1.15
VAPA-201ENST00000340541 PRO0461Q9UI25 63 aa7.85□□□□□ -1.15
VAPA-201ENST00000340541 Q8N9P0 234 aaPredicted RBP7.84□□□□□ -1.15
VAPA-201ENST00000340541 K7EP34 96 aa7.83□□□□□ -1.16
VAPA-201ENST00000340541 PRR15Q8IV56 129 aa7.83□□□□□ -1.16
VAPA-201ENST00000340541 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.81□□□□□ -1.16
VAPA-201ENST00000340541 HRES1P13985 223 aa7.8□□□□□ -1.16
VAPA-201ENST00000340541 MPLKIPQ8TAP9 179 aa7.8□□□□□ -1.16
VAPA-201ENST00000340541 ZCCHC13Q8WW36 166 aaKnown RBP7.8□□□□□ -1.16
VAPA-201ENST00000340541 MMP24-AS1A0A0U1RRL7 71 aa7.78□□□□□ -1.16
VAPA-201ENST00000340541 K7EQZ3 153 aa7.78□□□□□ -1.16
VAPA-201ENST00000340541 Q6ZVQ6 151 aa7.78□□□□□ -1.16
VAPA-201ENST00000340541 BPY2O14599 106 aa7.74□□□□□ -1.17
VAPA-201ENST00000340541 TMEM254Q8TBM7 123 aa7.73□□□□□ -1.17
VAPA-201ENST00000340541 MRPL34Q9BQ48 92 aaKnown RBP7.72□□□□□ -1.17
VAPA-201ENST00000340541 A0A1B0GV90 55 aa7.71□□□□□ -1.18
VAPA-201ENST00000340541 SPINK7P58062 85 aa7.71□□□□□ -1.18
VAPA-201ENST00000340541 GTF2H5Q6ZYL4 71 aa7.71□□□□□ -1.18
VAPA-201ENST00000340541 LINC00846Q9NV44 126 aa7.7□□□□□ -1.18
VAPA-201ENST00000340541 hDV103S1A0JD37 113 aa7.69□□□□□ -1.18
VAPA-201ENST00000340541 Q8N9L7 120 aa7.69□□□□□ -1.18
VAPA-201ENST00000340541 RBM12B-AS1Q9P1G2 102 aa7.69□□□□□ -1.18
VAPA-201ENST00000340541 FAM236DA0A1B0GTK5 79 aa7.67□□□□□ -1.18
VAPA-201ENST00000340541 F8W1H4 67 aa7.67□□□□□ -1.18
VAPA-201ENST00000340541 FAM236CP0DP71 79 aa7.67□□□□□ -1.18
VAPA-201ENST00000340541 KRTAP9-8Q9BYQ0 159 aa7.67□□□□□ -1.18
VAPA-201ENST00000340541 ETDBQ3ZM63 59 aa7.64□□□□□ -1.19
VAPA-201ENST00000340541 UBL5Q9BZL1 73 aa7.64□□□□□ -1.19
VAPA-201ENST00000340541 KRTAP4-12Q9BQ66 201 aa7.63□□□□□ -1.19
VAPA-201ENST00000340541 WFDC13Q8IUB5 93 aa7.62□□□□□ -1.19
VAPA-201ENST00000340541 NDUFS5O43920 106 aa7.61□□□□□ -1.19
VAPA-201ENST00000340541 LCE3BQ5TA77 95 aa7.61□□□□□ -1.19
VAPA-201ENST00000340541 CASC2Q6XLA1 102 aa7.61□□□□□ -1.19
VAPA-201ENST00000340541 Q5W150 140 aa7.59□□□□□ -1.19
VAPA-201ENST00000340541 KRTAP9-7A8MTY7 169 aa7.58□□□□□ -1.2
VAPA-201ENST00000340541 HCG22E2RYF7 251 aa7.55□□□□□ -1.2
VAPA-201ENST00000340541 KRTAP19-1Q8IUB9 90 aa7.52□□□□□ -1.21
VAPA-201ENST00000340541 MT2AP02795 61 aa7.51□□□□□ -1.21
VAPA-201ENST00000340541 CXCL6P80162 114 aa7.51□□□□□ -1.21
VAPA-201ENST00000340541 IGKV2D-30A0A075B6S6 120 aa7.5□□□□□ -1.21
VAPA-201ENST00000340541 IGKV2-30P06310 120 aa7.5□□□□□ -1.21
VAPA-201ENST00000340541 USH2AO75445 5202 aa7.49□□□□□ -1.21
VAPA-201ENST00000340541 C7orf65Q6ZTY9 151 aa7.48□□□□□ -1.21
VAPA-201ENST00000340541 MT1FP04733 61 aa7.46□□□□□ -1.22
VAPA-201ENST00000340541 SSPOA2VEC9 5147 aa7.46□□□□□ -1.22
VAPA-201ENST00000340541 KRTAP10-10P60014 251 aa7.44□□□□□ -1.22
VAPA-201ENST00000340541 KRTAP9-9Q9BYP9 154 aa7.44□□□□□ -1.22
VAPA-201ENST00000340541 KRTAP9-4Q9BYQ2 154 aa7.44□□□□□ -1.22
VAPA-201ENST00000340541 KRTAP9-3Q9BYQ3 159 aa7.44□□□□□ -1.22
VAPA-201ENST00000340541 FAM240AA0A1B0GVK7 77 aa7.43□□□□□ -1.22
VAPA-201ENST00000340541 ACYP1P07311 99 aa7.43□□□□□ -1.22
VAPA-201ENST00000340541 H1FX-AS1Q4G0G2 97 aa7.42□□□□□ -1.22
VAPA-201ENST00000340541 FCGBPQ9Y6R7 5405 aaPredicted RBP7.39□□□□□ -1.23
VAPA-201ENST00000340541 TP53AIP1Q9HCN2 124 aa7.38□□□□□ -1.23
VAPA-201ENST00000340541 J3QR89 54 aa7.37□□□□□ -1.23
VAPA-201ENST00000340541 C4orf26Q17RF5 130 aa7.37□□□□□ -1.23
VAPA-201ENST00000340541 ATP5EP2Q5VTU8 51 aa7.35□□□□□ -1.23
VAPA-201ENST00000340541 K7ERU9 68 aa7.33□□□□□ -1.24
VAPA-201ENST00000340541 KRTAP3-1Q9BYR8 98 aa7.32□□□□□ -1.24
VAPA-201ENST00000340541 KRTAP4-8A0A0G2JLE6 195 aa7.29□□□□□ -1.24
VAPA-201ENST00000340541 HIST1H4AP62805 103 aaKnown RBP7.28□□□□□ -1.24
VAPA-201ENST00000340541 LINC00643Q86TS7 51 aa7.27□□□□□ -1.25
VAPA-201ENST00000340541 KRTAP19-6Q3LI70 58 aa7.26□□□□□ -1.25
VAPA-201ENST00000340541 CYP4F30PQ9H0H9 118 aa7.25□□□□□ -1.25
VAPA-201ENST00000340541 A0A087WVE0 104 aa7.24□□□□□ -1.25
VAPA-201ENST00000340541 TRAV22A0A0B4J277 110 aa7.24□□□□□ -1.25
VAPA-201ENST00000340541 C1orf64Q8NEQ6 169 aa7.24□□□□□ -1.25
VAPA-201ENST00000340541 MACF1Q9UPN3 7388 aaKnown RBP7.21□□□□□ -1.26
VAPA-201ENST00000340541 LOC101927531A0A1B0GV80 90 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms