RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 TP53AIP1Q9HCN2 124 aa8.59□□□□□ -1.03
CPSF7-201ENST00000340437 ZNF861PO60384 105 aa8.58□□□□□ -1.04
CPSF7-201ENST00000340437 MEGF8Q7Z7M0 2845 aa8.56□□□□□ -1.04
CPSF7-201ENST00000340437 PRR26Q8N8Z3 221 aa8.55□□□□□ -1.04
CPSF7-201ENST00000340437 Q5W150 140 aa8.53□□□□□ -1.04
CPSF7-201ENST00000340437 FRAS1Q86XX4 4008 aa8.53□□□□□ -1.04
CPSF7-201ENST00000340437 HRES1P13985 223 aa8.53□□□□□ -1.04
CPSF7-201ENST00000340437 SMR3BP02814 79 aaPredicted RBP8.52□□□□□ -1.05
CPSF7-201ENST00000340437 LINC00483Q53H64 154 aa8.51□□□□□ -1.05
CPSF7-201ENST00000340437 LCA10Q71F78 164 aa8.51□□□□□ -1.05
CPSF7-201ENST00000340437 SEC61GP60059 68 aa8.51□□□□□ -1.05
CPSF7-201ENST00000340437 DMBT1Q9UGM3 2413 aaPredicted RBP8.51□□□□□ -1.05
CPSF7-201ENST00000340437 FLG2Q5D862 2391 aaPredicted RBP8.5□□□□□ -1.05
CPSF7-201ENST00000340437 LOC101927531A0A1B0GV80 90 aa8.48□□□□□ -1.05
CPSF7-201ENST00000340437 Q6ZR54 194 aa8.48□□□□□ -1.05
CPSF7-201ENST00000340437 STARD9Q9P2P6 4700 aa8.48□□□□□ -1.05
CPSF7-201ENST00000340437 IGLV7-43P04211 117 aa8.48□□□□□ -1.05
CPSF7-201ENST00000340437 SPINK7P58062 85 aa8.46□□□□□ -1.05
CPSF7-201ENST00000340437 PLAC8Q9NZF1 115 aa8.46□□□□□ -1.05
CPSF7-201ENST00000340437 KMT2AQ03164 3969 aa8.46□□□□□ -1.06
CPSF7-201ENST00000340437 C4orf48Q5BLP8 95 aa8.45□□□□□ -1.06
CPSF7-201ENST00000340437 ASB16-AS1Q495Z4 193 aa8.45□□□□□ -1.06
CPSF7-201ENST00000340437 Q75L30 129 aa8.44□□□□□ -1.06
CPSF7-201ENST00000340437 KRTAP10-2P60368 255 aa8.43□□□□□ -1.06
CPSF7-201ENST00000340437 DNAH8Q96JB1 4490 aa8.41□□□□□ -1.06
CPSF7-201ENST00000340437 LINC00313P59037 77 aa8.4□□□□□ -1.06
CPSF7-201ENST00000340437 LINC01558Q9Y6Z2 57 aa8.4□□□□□ -1.07
CPSF7-201ENST00000340437 IGKV2D-30A0A075B6S6 120 aa8.39□□□□□ -1.07
CPSF7-201ENST00000340437 IGKV2-30P06310 120 aa8.39□□□□□ -1.07
CPSF7-201ENST00000340437 SPINK1P00995 79 aa8.38□□□□□ -1.07
CPSF7-201ENST00000340437 PRKDCP78527 4128 aaKnown RBP8.37□□□□□ -1.07
CPSF7-201ENST00000340437 ATP11AUNQ6ZP68 121 aa8.36□□□□□ -1.07
CPSF7-201ENST00000340437 CDC42SE1Q9NRR8 79 aa8.36□□□□□ -1.07
CPSF7-201ENST00000340437 ACYP2P14621 99 aa8.35□□□□□ -1.07
CPSF7-201ENST00000340437 HECTD4Q9Y4D8 3996 aa8.34□□□□□ -1.07
CPSF7-201ENST00000340437 DNAH17Q9UFH2 4485 aa8.33□□□□□ -1.08
CPSF7-201ENST00000340437 SSBP3-AS1Q7Z2R9 100 aa8.32□□□□□ -1.08
CPSF7-201ENST00000340437 PLA2G1BP04054 148 aaKnown RBP8.31□□□□□ -1.08
CPSF7-201ENST00000340437 DNAH2Q9P225 4427 aa8.31□□□□□ -1.08
CPSF7-201ENST00000340437 KTN1-AS1Q86SY8 53 aa8.3□□□□□ -1.08
CPSF7-201ENST00000340437 VPS13DQ5THJ4 4388 aa8.3□□□□□ -1.08
CPSF7-201ENST00000340437 KRTAP13-2Q52LG2 175 aa8.28□□□□□ -1.08
CPSF7-201ENST00000340437 DYNC2H1Q8NCM8 4307 aaKnown RBP8.28□□□□□ -1.08
CPSF7-201ENST00000340437 C8orf87E5RJ46 101 aa8.27□□□□□ -1.09
CPSF7-201ENST00000340437 FAM229AH3BQW9 127 aa8.27□□□□□ -1.09
CPSF7-201ENST00000340437 A0A1B0GU69 56 aa8.27□□□□□ -1.09
CPSF7-201ENST00000340437 DNAH6Q9C0G6 4158 aa8.27□□□□□ -1.09
CPSF7-201ENST00000340437 KRTAP10-1P60331 282 aa8.26□□□□□ -1.09
CPSF7-201ENST00000340437 DNAH11Q96DT5 4516 aa8.25□□□□□ -1.09
CPSF7-201ENST00000340437 KRTAP13-3Q3SY46 172 aa8.25□□□□□ -1.09
CPSF7-201ENST00000340437 C9orf92A6NGG3 77 aa8.25□□□□□ -1.09
CPSF7-201ENST00000340437 A6NN06 94 aa8.24□□□□□ -1.09
CPSF7-201ENST00000340437 TYMSOSQ8TAI1 123 aa8.24□□□□□ -1.09
CPSF7-201ENST00000340437 RBM12B-AS1Q9P1G2 102 aa8.23□□□□□ -1.09
CPSF7-201ENST00000340437 C7orf65Q6ZTY9 151 aa8.23□□□□□ -1.09
CPSF7-201ENST00000340437 DNHD1Q96M86 4753 aa8.2□□□□□ -1.1
CPSF7-201ENST00000340437 PRAC1Q96KF2 57 aa8.2□□□□□ -1.1
CPSF7-201ENST00000340437 Q8N1X5 172 aa8.19□□□□□ -1.1
CPSF7-201ENST00000340437 DMAC1Q96GE9 116 aa8.19□□□□□ -1.1
CPSF7-201ENST00000340437 ADM2Q7Z4H4 148 aa8.14□□□□□ -1.11
CPSF7-201ENST00000340437 LRP1BQ9NZR2 4599 aa8.14□□□□□ -1.11
CPSF7-201ENST00000340437 ALMS1Q8TCU4 4167 aa8.12□□□□□ -1.11
CPSF7-201ENST00000340437 MIR22HGQ0VDD5 57 aa8.09□□□□□ -1.11
CPSF7-201ENST00000340437 KRTAP16-1A8MUX0 517 aa8.09□□□□□ -1.11
CPSF7-201ENST00000340437 KRTAP1-4P0C5Y4 121 aa8.09□□□□□ -1.11
CPSF7-201ENST00000340437 DNAH5Q8TE73 4624 aa8.08□□□□□ -1.12
CPSF7-201ENST00000340437 UQCR11O14957 56 aa8.06□□□□□ -1.12
CPSF7-201ENST00000340437 HYDINQ4G0P3 5121 aa8.02□□□□□ -1.13
CPSF7-201ENST00000340437 LINC00304Q8N9R0 145 aa8.01□□□□□ -1.13
CPSF7-201ENST00000340437 Q6ZSA8 131 aa8□□□□□ -1.13
CPSF7-201ENST00000340437 VPS13BQ7Z7G8 4022 aa8□□□□□ -1.13
CPSF7-201ENST00000340437 SPATA8Q6RVD6 105 aa7.97□□□□□ -1.13
CPSF7-201ENST00000340437 FAT2Q9NYQ8 4349 aa7.89□□□□□ -1.15
CPSF7-201ENST00000340437 CSAG1Q6PB30 78 aa7.86□□□□□ -1.15
CPSF7-201ENST00000340437 PKHD1P08F94 4074 aa7.85□□□□□ -1.15
CPSF7-201ENST00000340437 PKD1P98161 4303 aa7.84□□□□□ -1.15
CPSF7-201ENST00000340437 FAT1Q14517 4588 aa7.82□□□□□ -1.16
CPSF7-201ENST00000340437 LINC01554Q52M75 96 aa7.77□□□□□ -1.16
CPSF7-201ENST00000340437 CRIPTQ9P021 101 aa7.77□□□□□ -1.17
CPSF7-201ENST00000340437 A0A1B0GU33 70 aa7.76□□□□□ -1.17
CPSF7-201ENST00000340437 H0YAA0 97 aa7.74□□□□□ -1.17
CPSF7-201ENST00000340437 KRTAP3-1Q9BYR8 98 aa7.74□□□□□ -1.17
CPSF7-201ENST00000340437 A8MUU9 505 aa7.69□□□□□ -1.18
CPSF7-201ENST00000340437 DYNC1H1Q14204 4646 aaKnown RBP7.68□□□□□ -1.18
CPSF7-201ENST00000340437 C20orf166-AS1Q96NR2 134 aa7.67□□□□□ -1.18
CPSF7-201ENST00000340437 A0A0D9SG42 100 aa7.66□□□□□ -1.18
CPSF7-201ENST00000340437 H1FX-AS1Q4G0G2 97 aa7.65□□□□□ -1.18
CPSF7-201ENST00000340437 Q5VSD8 79 aa7.65□□□□□ -1.18
CPSF7-201ENST00000340437 RPS29P62273 56 aaKnown RBP7.63□□□□□ -1.19
CPSF7-201ENST00000340437 SACSQ9NZJ4 4579 aa7.59□□□□□ -1.19
CPSF7-201ENST00000340437 COX6B2Q6YFQ2 88 aa7.59□□□□□ -1.19
CPSF7-201ENST00000340437 MYCBP2O75592 4640 aa7.58□□□□□ -1.2
CPSF7-201ENST00000340437 K7ERS5 55 aa7.58□□□□□ -1.2
CPSF7-201ENST00000340437 LRP1Q07954 4544 aaKnown RBP7.53□□□□□ -1.2
CPSF7-201ENST00000340437 KRTAP10-4P60372 401 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-201ENST00000340437 A0A1B0GVY2 172 aa7.49□□□□□ -1.21
CPSF7-201ENST00000340437 KRTAP25-1Q3LHN0 102 aa7.48□□□□□ -1.21
CPSF7-201ENST00000340437 APOBP04114 4563 aaKnown RBP7.48□□□□□ -1.21
CPSF7-201ENST00000340437 KRTAP10-8P60410 259 aa7.44□□□□□ -1.22
CPSF7-201ENST00000340437 FAT3Q8TDW7 4589 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms