RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 C1orf195Q5TG92 126 aa8.39□□□□□ -1.07
CBX3-201ENST00000337620 NDUFB1O75438 58 aa8.39□□□□□ -1.07
CBX3-201ENST00000337620 RPS29P62273 56 aaKnown RBP8.39□□□□□ -1.07
CBX3-201ENST00000337620 RPS28P62857 69 aaKnown RBP8.39□□□□□ -1.07
CBX3-201ENST00000337620 PRR15Q8IV56 129 aa8.38□□□□□ -1.07
CBX3-201ENST00000337620 HERC2O95714 4834 aa8.37□□□□□ -1.07
CBX3-201ENST00000337620 UQCRQO14949 82 aa8.36□□□□□ -1.07
CBX3-201ENST00000337620 IGHV6-1A0A0B4J1U7 121 aa8.34□□□□□ -1.07
CBX3-201ENST00000337620 ABCA13Q86UQ4 5058 aa8.33□□□□□ -1.08
CBX3-201ENST00000337620 A0A1B0GVX0 72 aa8.33□□□□□ -1.08
CBX3-201ENST00000337620 MT1HL1P0DM35 61 aa8.32□□□□□ -1.08
CBX3-201ENST00000337620 HCG22E2RYF7 251 aa8.31□□□□□ -1.08
CBX3-201ENST00000337620 OXTP01178 125 aa8.31□□□□□ -1.08
CBX3-201ENST00000337620 WFDC13Q8IUB5 93 aa8.3□□□□□ -1.08
CBX3-201ENST00000337620 RETNLBQ9BQ08 111 aa8.29□□□□□ -1.08
CBX3-201ENST00000337620 MMP24-AS1A0A0U1RRL7 71 aa8.27□□□□□ -1.08
CBX3-201ENST00000337620 COX7CP15954 63 aa8.27□□□□□ -1.08
CBX3-201ENST00000337620 C8orf17Q9NRJ1 99 aa8.27□□□□□ -1.08
CBX3-201ENST00000337620 DMBT1Q9UGM3 2413 aaPredicted RBP8.27□□□□□ -1.09
CBX3-201ENST00000337620 ATOX1O00244 68 aa8.27□□□□□ -1.09
CBX3-201ENST00000337620 CASC2Q6XLA1 102 aa8.27□□□□□ -1.09
CBX3-201ENST00000337620 NOTCH2NLQ7Z3S9 236 aa8.27□□□□□ -1.09
CBX3-201ENST00000337620 hDV103S1A0JD37 113 aa8.24□□□□□ -1.09
CBX3-201ENST00000337620 KRTAP29-1A8MX34 341 aaPredicted RBP8.24□□□□□ -1.09
CBX3-201ENST00000337620 LINC00313P59037 77 aa8.23□□□□□ -1.09
CBX3-201ENST00000337620 C8orf87E5RJ46 101 aa8.21□□□□□ -1.09
CBX3-201ENST00000337620 TMEM258P61165 79 aa8.21□□□□□ -1.09
CBX3-201ENST00000337620 J3QL48 77 aa8.17□□□□□ -1.1
CBX3-201ENST00000337620 TMEM254Q8TBM7 123 aa8.17□□□□□ -1.1
CBX3-201ENST00000337620 MRPL34Q9BQ48 92 aaKnown RBP8.17□□□□□ -1.1
CBX3-201ENST00000337620 SERP2Q8N6R1 65 aa8.16□□□□□ -1.1
CBX3-201ENST00000337620 OCR1Q9BZK8 76 aa8.16□□□□□ -1.1
CBX3-201ENST00000337620 TRAV7A0A075B6U4 112 aa8.15□□□□□ -1.1
CBX3-201ENST00000337620 NDUFS5O43920 106 aa8.15□□□□□ -1.1
CBX3-201ENST00000337620 C9orf92A6NGG3 77 aa8.14□□□□□ -1.11
CBX3-201ENST00000337620 FP248Q71RG6 208 aaPredicted RBP8.12□□□□□ -1.11
CBX3-201ENST00000337620 KRTAP16-1A8MUX0 517 aa8.11□□□□□ -1.11
CBX3-201ENST00000337620 CYSTM1Q9H1C7 97 aa8.11□□□□□ -1.11
CBX3-201ENST00000337620 IGLV7-46A0A075B6I9 117 aa8.1□□□□□ -1.11
CBX3-201ENST00000337620 PRR4Q16378 134 aa8.09□□□□□ -1.11
CBX3-201ENST00000337620 PCLOQ9Y6V0 5065 aa8.09□□□□□ -1.12
CBX3-201ENST00000337620 Q8N9P0 234 aaPredicted RBP8.07□□□□□ -1.12
CBX3-201ENST00000337620 TP53AIP1Q9HCN2 124 aa8.07□□□□□ -1.12
CBX3-201ENST00000337620 C4orf26Q17RF5 130 aa8.06□□□□□ -1.12
CBX3-201ENST00000337620 C20orf197Q8N268 126 aa8.04□□□□□ -1.12
CBX3-201ENST00000337620 PRO0628Q9UI54 55 aa8.02□□□□□ -1.13
CBX3-201ENST00000337620 H0Y9P7 68 aa8.01□□□□□ -1.13
CBX3-201ENST00000337620 TRAV22A0A0B4J277 110 aa8□□□□□ -1.13
CBX3-201ENST00000337620 KRTAP13-3Q3SY46 172 aa8□□□□□ -1.13
CBX3-201ENST00000337620 MP68P56378 58 aa8□□□□□ -1.13
CBX3-201ENST00000337620 SNURFQ9Y675 71 aa8□□□□□ -1.13
CBX3-201ENST00000337620 Q5W150 140 aa7.99□□□□□ -1.13
CBX3-201ENST00000337620 A8MUU9 505 aa7.97□□□□□ -1.13
CBX3-201ENST00000337620 C20orf166-AS1Q96NR2 134 aa7.97□□□□□ -1.13
CBX3-201ENST00000337620 LINC00208Q96KT6 92 aa7.97□□□□□ -1.13
CBX3-201ENST00000337620 SERP1Q9Y6X1 66 aa7.96□□□□□ -1.13
CBX3-201ENST00000337620 A0A0U1RQV1 116 aa7.95□□□□□ -1.14
CBX3-201ENST00000337620 KLKP1Q107X0 134 aa7.94□□□□□ -1.14
CBX3-201ENST00000337620 XP32Q5T750 250 aa7.94□□□□□ -1.14
CBX3-201ENST00000337620 C1orf64Q8NEQ6 169 aa7.94□□□□□ -1.14
CBX3-201ENST00000337620 TPRXLQ17RH7 258 aa7.93□□□□□ -1.14
CBX3-201ENST00000337620 Q75L30 129 aa7.93□□□□□ -1.14
CBX3-201ENST00000337620 FAM236DA0A1B0GTK5 79 aa7.92□□□□□ -1.14
CBX3-201ENST00000337620 FAM236CP0DP71 79 aa7.92□□□□□ -1.14
CBX3-201ENST00000337620 LPAP08519 4548 aa7.92□□□□□ -1.14
CBX3-201ENST00000337620 H3BPC8 53 aa7.91□□□□□ -1.14
CBX3-201ENST00000337620 ZCCHC13Q8WW36 166 aaKnown RBP7.91□□□□□ -1.14
CBX3-201ENST00000337620 HERC1Q15751 4861 aa7.89□□□□□ -1.15
CBX3-201ENST00000337620 H7BZZ5 65 aa7.89□□□□□ -1.15
CBX3-201ENST00000337620 SMIM26A0A096LP01 95 aa7.88□□□□□ -1.15
CBX3-201ENST00000337620 RPL37P61927 97 aaKnown RBP7.87□□□□□ -1.15
CBX3-201ENST00000337620 ATP11AUNQ6ZP68 121 aa7.86□□□□□ -1.15
CBX3-201ENST00000337620 LOC101927531A0A1B0GV80 90 aa7.85□□□□□ -1.15
CBX3-201ENST00000337620 IGKV2D-30A0A075B6S6 120 aa7.84□□□□□ -1.16
CBX3-201ENST00000337620 NDUFC1O43677 76 aa7.84□□□□□ -1.16
CBX3-201ENST00000337620 IGKV2-30P06310 120 aa7.84□□□□□ -1.16
CBX3-201ENST00000337620 LRP2P98164 4655 aa7.83□□□□□ -1.16
CBX3-201ENST00000337620 ATP5EP56381 51 aaPredicted RBP7.82□□□□□ -1.16
CBX3-201ENST00000337620 PCOTHQ58A44 107 aa7.82□□□□□ -1.16
CBX3-201ENST00000337620 CYP4F30PQ9H0H9 118 aa7.82□□□□□ -1.16
CBX3-201ENST00000337620 C7orf65Q6ZTY9 151 aa7.76□□□□□ -1.17
CBX3-201ENST00000337620 HMCN2Q8NDA2 5059 aa7.76□□□□□ -1.17
CBX3-201ENST00000337620 SPINK7P58062 85 aa7.74□□□□□ -1.17
CBX3-201ENST00000337620 SEC61GP60059 68 aa7.74□□□□□ -1.17
CBX3-201ENST00000337620 V9GYY9 64 aa7.74□□□□□ -1.17
CBX3-201ENST00000337620 HRES1P13985 223 aa7.7□□□□□ -1.18
CBX3-201ENST00000337620 SEC61BP60468 96 aaKnown RBP7.68□□□□□ -1.18
CBX3-201ENST00000337620 SPANXA2-OT1Q8N9U9 137 aa7.67□□□□□ -1.18
CBX3-201ENST00000337620 BRK1Q8WUW1 75 aa7.66□□□□□ -1.18
CBX3-201ENST00000337620 MUC17Q685J3 4493 aa7.6□□□□□ -1.19
CBX3-201ENST00000337620 Q1T7F1 81 aa7.54□□□□□ -1.2
CBX3-201ENST00000337620 DMAC1Q96GE9 116 aa7.54□□□□□ -1.2
CBX3-201ENST00000337620 PMAIP1Q13794 54 aa7.54□□□□□ -1.2
CBX3-201ENST00000337620 KRTAP4-1Q9BYQ7 146 aa7.52□□□□□ -1.2
CBX3-201ENST00000337620 ACYP2P14621 99 aa7.52□□□□□ -1.21
CBX3-201ENST00000337620 COX6B2Q6YFQ2 88 aa7.51□□□□□ -1.21
CBX3-201ENST00000337620 MPLKIPQ8TAP9 179 aa7.51□□□□□ -1.21
CBX3-201ENST00000337620 KRTAP3-1Q9BYR8 98 aa7.49□□□□□ -1.21
CBX3-201ENST00000337620 A8MUN3 132 aa7.48□□□□□ -1.21
CBX3-201ENST00000337620 COA5Q86WW8 74 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms