RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 SVEP1Q4LDE5 3571 aa7.62□□□□□ -1.19
VSTM4-202ENST00000332853 NBPF19A0A087WUL8 3843 aa7.61□□□□□ -1.19
VSTM4-202ENST00000332853 KTN1-AS1Q86SY8 53 aa7.61□□□□□ -1.19
VSTM4-202ENST00000332853 SPINK7P58062 85 aa7.61□□□□□ -1.19
VSTM4-202ENST00000332853 M0R2T5 61 aa7.6□□□□□ -1.19
VSTM4-202ENST00000332853 Q75L30 129 aa7.6□□□□□ -1.19
VSTM4-202ENST00000332853 KRTAP29-1A8MX34 341 aaPredicted RBP7.6□□□□□ -1.19
VSTM4-202ENST00000332853 LINC01558Q9Y6Z2 57 aa7.59□□□□□ -1.2
VSTM4-202ENST00000332853 A0A1B0GU33 70 aa7.58□□□□□ -1.2
VSTM4-202ENST00000332853 STAB2Q8WWQ8 2551 aa7.58□□□□□ -1.2
VSTM4-202ENST00000332853 Q5VV11 94 aa7.56□□□□□ -1.2
VSTM4-202ENST00000332853 NIPBLQ6KC79 2804 aaeCLIP7.55□□□□□ -1.2
VSTM4-202ENST00000332853 SPENQ96T58 3664 aaKnown RBP7.55□□□□□ -1.2
VSTM4-202ENST00000332853 S4R3F8 94 aa7.54□□□□□ -1.2
VSTM4-202ENST00000332853 MXRA5Q9NR99 2828 aa7.52□□□□□ -1.21
VSTM4-202ENST00000332853 KRTAP13-1Q8IUC0 172 aa7.5□□□□□ -1.21
VSTM4-202ENST00000332853 CAMK2N1Q7Z7J9 78 aa7.5□□□□□ -1.21
VSTM4-202ENST00000332853 CELSR1Q9NYQ6 3014 aa7.49□□□□□ -1.21
VSTM4-202ENST00000332853 LCA10Q71F78 164 aa7.48□□□□□ -1.21
VSTM4-202ENST00000332853 BSNQ9UPA5 3926 aa7.48□□□□□ -1.21
VSTM4-202ENST00000332853 TENM4Q6N022 2769 aa7.47□□□□□ -1.21
VSTM4-202ENST00000332853 KRTAP13-2Q52LG2 175 aa7.47□□□□□ -1.21
VSTM4-202ENST00000332853 LUZP6Q538Z0 58 aa7.46□□□□□ -1.21
VSTM4-202ENST00000332853 DMAC1Q96GE9 116 aa7.46□□□□□ -1.21
VSTM4-202ENST00000332853 CSAG1Q6PB30 78 aa7.43□□□□□ -1.22
VSTM4-202ENST00000332853 PRAC1Q96KF2 57 aa7.4□□□□□ -1.22
VSTM4-202ENST00000332853 ASB16-AS1Q495Z4 193 aa7.37□□□□□ -1.23
VSTM4-202ENST00000332853 SEC61BP60468 96 aaKnown RBP7.35□□□□□ -1.23
VSTM4-202ENST00000332853 CUBNO60494 3623 aa7.34□□□□□ -1.24
VSTM4-202ENST00000332853 CSMD2Q7Z408 3487 aa7.33□□□□□ -1.24
VSTM4-202ENST00000332853 PDZD2O15018 2839 aa7.33□□□□□ -1.24
VSTM4-202ENST00000332853 SPATA8Q6RVD6 105 aa7.31□□□□□ -1.24
VSTM4-202ENST00000332853 H1FX-AS1Q4G0G2 97 aa7.29□□□□□ -1.24
VSTM4-202ENST00000332853 R4GN34 69 aa7.29□□□□□ -1.24
VSTM4-202ENST00000332853 DMBT1Q9UGM3 2413 aaPredicted RBP7.29□□□□□ -1.24
VSTM4-202ENST00000332853 RPS29P62273 56 aaKnown RBP7.27□□□□□ -1.25
VSTM4-202ENST00000332853 ADM2Q7Z4H4 148 aa7.25□□□□□ -1.25
VSTM4-202ENST00000332853 ANK3Q12955 4377 aaKnown RBP7.25□□□□□ -1.25
VSTM4-202ENST00000332853 ZFHX3Q15911 3703 aa7.24□□□□□ -1.25
VSTM4-202ENST00000332853 KRTAP21-3Q3LHN1 58 aa7.24□□□□□ -1.25
VSTM4-202ENST00000332853 TENM3Q9P273 2699 aa7.22□□□□□ -1.25
VSTM4-202ENST00000332853 M0QZ58 72 aa7.22□□□□□ -1.25
VSTM4-202ENST00000332853 RPL37P61927 97 aaKnown RBP7.21□□□□□ -1.26
VSTM4-202ENST00000332853 TENM1Q9UKZ4 2725 aa7.18□□□□□ -1.26
VSTM4-202ENST00000332853 KRTAP1-4P0C5Y4 121 aa7.17□□□□□ -1.26
VSTM4-202ENST00000332853 A8MU10 97 aa7.14□□□□□ -1.27
VSTM4-202ENST00000332853 OTOGQ6ZRI0 2925 aa7.14□□□□□ -1.27
VSTM4-202ENST00000332853 ROMO1P60602 79 aa7.13□□□□□ -1.27
VSTM4-202ENST00000332853 VPS13CQ709C8 3753 aa7.12□□□□□ -1.27
VSTM4-202ENST00000332853 FLG2Q5D862 2391 aaPredicted RBP7.11□□□□□ -1.27
VSTM4-202ENST00000332853 TENM2Q9NT68 2774 aa7.09□□□□□ -1.27
VSTM4-202ENST00000332853 PLAC4Q8WY50 150 aa7.09□□□□□ -1.28
VSTM4-202ENST00000332853 TRRAPQ9Y4A5 3859 aa7.07□□□□□ -1.28
VSTM4-202ENST00000332853 VWFP04275 2813 aa7.07□□□□□ -1.28
VSTM4-202ENST00000332853 FBN1P35555 2871 aaKnown RBP7.07□□□□□ -1.28
VSTM4-202ENST00000332853 A8MUU9 505 aa7.06□□□□□ -1.28
VSTM4-202ENST00000332853 A0A0A0MQY5 61 aa7.06□□□□□ -1.28
VSTM4-202ENST00000332853 C20orf166-AS1Q96NR2 134 aa7.05□□□□□ -1.28
VSTM4-202ENST00000332853 A6NN06 94 aa7□□□□□ -1.29
VSTM4-202ENST00000332853 PKD1L1Q8TDX9 2849 aa6.98□□□□□ -1.29
VSTM4-202ENST00000332853 XP32Q5T750 250 aa6.96□□□□□ -1.3
VSTM4-202ENST00000332853 KRTAP16-1A8MUX0 517 aa6.94□□□□□ -1.3
VSTM4-202ENST00000332853 TGP01266 2768 aa6.89□□□□□ -1.31
VSTM4-202ENST00000332853 ZNF469Q96JG9 3925 aaPredicted RBP6.87□□□□□ -1.31
VSTM4-202ENST00000332853 A0A1B0GVY2 172 aa6.85□□□□□ -1.31
VSTM4-202ENST00000332853 KRTAP25-1Q3LHN0 102 aa6.84□□□□□ -1.31
VSTM4-202ENST00000332853 H3BS24 57 aa6.83□□□□□ -1.32
VSTM4-202ENST00000332853 HUWE1Q7Z6Z7 4374 aaKnown RBP6.77□□□□□ -1.32
VSTM4-202ENST00000332853 AKAP9Q99996 3911 aa6.76□□□□□ -1.33
VSTM4-202ENST00000332853 KRTAP13-3Q3SY46 172 aa6.76□□□□□ -1.33
VSTM4-202ENST00000332853 H0YAA0 97 aa6.74□□□□□ -1.33
VSTM4-202ENST00000332853 TPRXLQ17RH7 258 aa6.74□□□□□ -1.33
VSTM4-202ENST00000332853 KRTAP10-8P60410 259 aa6.7□□□□□ -1.34
VSTM4-202ENST00000332853 C10orf95Q9H7T3 257 aa6.64□□□□□ -1.35
VSTM4-202ENST00000332853 P0C880 135 aa6.63□□□□□ -1.35
VSTM4-202ENST00000332853 FBN3Q75N90 2809 aa6.63□□□□□ -1.35
VSTM4-202ENST00000332853 CSMD3Q7Z407 3707 aa6.6□□□□□ -1.35
VSTM4-202ENST00000332853 TNP1P09430 55 aa6.58□□□□□ -1.36
VSTM4-202ENST00000332853 MEGF8Q7Z7M0 2845 aa6.5□□□□□ -1.37
VSTM4-202ENST00000332853 NDUFAF8A1L188 74 aa6.49□□□□□ -1.37
VSTM4-202ENST00000332853 SRRM2Q9UQ35 2752 aaKnown RBP6.49□□□□□ -1.37
VSTM4-202ENST00000332853 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
VSTM4-202ENST00000332853 KRTAP3-1Q9BYR8 98 aa6.46□□□□□ -1.37
VSTM4-202ENST00000332853 DNAH9Q9NYC9 4486 aa6.45□□□□□ -1.38
VSTM4-202ENST00000332853 COL7A1Q02388 2944 aa6.43□□□□□ -1.38
VSTM4-202ENST00000332853 KRTAP12-2P59991 146 aa6.38□□□□□ -1.39
VSTM4-202ENST00000332853 ALMS1Q8TCU4 4167 aa6.32□□□□□ -1.4
VSTM4-202ENST00000332853 PP632Q6XCG6 107 aa6.32□□□□□ -1.4
VSTM4-202ENST00000332853 DNAH10Q8IVF4 4471 aa6.29□□□□□ -1.4
VSTM4-202ENST00000332853 DNAH1Q9P2D7 4330 aa6.29□□□□□ -1.4
VSTM4-202ENST00000332853 PLECQ15149 4684 aaKnown RBP6.28□□□□□ -1.4
VSTM4-202ENST00000332853 MT1HL1P0DM35 61 aa6.27□□□□□ -1.41
VSTM4-202ENST00000332853 KRTAP10-4P60372 401 aaPredicted RBP6.24□□□□□ -1.41
VSTM4-202ENST00000332853 KRTAP12-1P59990 96 aa6.24□□□□□ -1.41
VSTM4-202ENST00000332853 KRTAP13-4Q3LI77 160 aa6.23□□□□□ -1.41
VSTM4-202ENST00000332853 KRTAP4-5Q9BYR2 181 aa6.23□□□□□ -1.41
VSTM4-202ENST00000332853 PRO2289Q9P1D8 64 aa6.19□□□□□ -1.42
VSTM4-202ENST00000332853 KRTAP10-6P60371 365 aaPredicted RBP6.19□□□□□ -1.42
VSTM4-202ENST00000332853 DNAH5Q8TE73 4624 aa6.1□□□□□ -1.43
VSTM4-202ENST00000332853 DNAH11Q96DT5 4516 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 253.3 ms