RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 IGLV7-43P04211 117 aa8.34□□□□□ -1.07
ATP2C1-201ENST00000328560 MRPL34Q9BQ48 92 aaKnown RBP8.34□□□□□ -1.07
ATP2C1-201ENST00000328560 COA5Q86WW8 74 aa8.32□□□□□ -1.08
ATP2C1-201ENST00000328560 FRAS1Q86XX4 4008 aa8.32□□□□□ -1.08
ATP2C1-201ENST00000328560 VPS13DQ5THJ4 4388 aa8.32□□□□□ -1.08
ATP2C1-201ENST00000328560 FBN3Q75N90 2809 aa8.31□□□□□ -1.08
ATP2C1-201ENST00000328560 PRR15LQ9BU68 103 aa8.3□□□□□ -1.08
ATP2C1-201ENST00000328560 IGLV7-46A0A075B6I9 117 aa8.29□□□□□ -1.08
ATP2C1-201ENST00000328560 ASB16-AS1Q495Z4 193 aa8.29□□□□□ -1.08
ATP2C1-201ENST00000328560 CHKB-CPT1BH3BT56 60 aa8.28□□□□□ -1.08
ATP2C1-201ENST00000328560 KRTAP10-2P60368 255 aa8.28□□□□□ -1.08
ATP2C1-201ENST00000328560 Q8N9P0 234 aaPredicted RBP8.28□□□□□ -1.08
ATP2C1-201ENST00000328560 DNAH8Q96JB1 4490 aa8.26□□□□□ -1.09
ATP2C1-201ENST00000328560 RETNLBQ9BQ08 111 aa8.26□□□□□ -1.09
ATP2C1-201ENST00000328560 HECTD4Q9Y4D8 3996 aa8.26□□□□□ -1.09
ATP2C1-201ENST00000328560 A8MU10 97 aa8.26□□□□□ -1.09
ATP2C1-201ENST00000328560 Q5VV11 94 aa8.24□□□□□ -1.09
ATP2C1-201ENST00000328560 SPAG11AQ6PDA7 123 aa8.24□□□□□ -1.09
ATP2C1-201ENST00000328560 DNAH2Q9P225 4427 aa8.23□□□□□ -1.09
ATP2C1-201ENST00000328560 Q5W150 140 aa8.23□□□□□ -1.09
ATP2C1-201ENST00000328560 SSBP3-AS1Q7Z2R9 100 aa8.23□□□□□ -1.09
ATP2C1-201ENST00000328560 LIMD2Q9BT23 127 aa8.23□□□□□ -1.09
ATP2C1-201ENST00000328560 DNAH17Q9UFH2 4485 aa8.2□□□□□ -1.1
ATP2C1-201ENST00000328560 SPTSSBQ8NFR3 76 aa8.19□□□□□ -1.1
ATP2C1-201ENST00000328560 HRES1P13985 223 aa8.17□□□□□ -1.1
ATP2C1-201ENST00000328560 KTN1-AS1Q86SY8 53 aa8.17□□□□□ -1.1
ATP2C1-201ENST00000328560 A6NED7 52 aa8.17□□□□□ -1.1
ATP2C1-201ENST00000328560 KRTAP10-1P60331 282 aa8.16□□□□□ -1.1
ATP2C1-201ENST00000328560 LOC101927531A0A1B0GV80 90 aa8.15□□□□□ -1.1
ATP2C1-201ENST00000328560 LINC00313P59037 77 aa8.15□□□□□ -1.1
ATP2C1-201ENST00000328560 DNHD1Q96M86 4753 aa8.15□□□□□ -1.1
ATP2C1-201ENST00000328560 C8orf87E5RJ46 101 aa8.15□□□□□ -1.11
ATP2C1-201ENST00000328560 DNAH6Q9C0G6 4158 aa8.14□□□□□ -1.11
ATP2C1-201ENST00000328560 KRTAP13-2Q52LG2 175 aa8.13□□□□□ -1.11
ATP2C1-201ENST00000328560 PRR26Q8N8Z3 221 aa8.13□□□□□ -1.11
ATP2C1-201ENST00000328560 DNAH11Q96DT5 4516 aa8.11□□□□□ -1.11
ATP2C1-201ENST00000328560 PLA2G1BP04054 148 aaKnown RBP8.09□□□□□ -1.11
ATP2C1-201ENST00000328560 Q75L30 129 aa8.07□□□□□ -1.12
ATP2C1-201ENST00000328560 KRTAP13-3Q3SY46 172 aa8.06□□□□□ -1.12
ATP2C1-201ENST00000328560 Q6ZSA8 131 aa8.06□□□□□ -1.12
ATP2C1-201ENST00000328560 LCA10Q71F78 164 aa8.06□□□□□ -1.12
ATP2C1-201ENST00000328560 TYMSOSQ8TAI1 123 aa8.05□□□□□ -1.12
ATP2C1-201ENST00000328560 LINC01558Q9Y6Z2 57 aa8.05□□□□□ -1.12
ATP2C1-201ENST00000328560 FAM229AH3BQW9 127 aa8.04□□□□□ -1.12
ATP2C1-201ENST00000328560 IGKV2D-30A0A075B6S6 120 aa8.03□□□□□ -1.12
ATP2C1-201ENST00000328560 IGKV2-30P06310 120 aa8.03□□□□□ -1.12
ATP2C1-201ENST00000328560 ACYP2P14621 99 aa8.03□□□□□ -1.12
ATP2C1-201ENST00000328560 ALMS1Q8TCU4 4167 aa8.02□□□□□ -1.12
ATP2C1-201ENST00000328560 LRP1BQ9NZR2 4599 aa8.02□□□□□ -1.13
ATP2C1-201ENST00000328560 DNAH5Q8TE73 4624 aa8.01□□□□□ -1.13
ATP2C1-201ENST00000328560 SPINK7P58062 85 aa8.01□□□□□ -1.13
ATP2C1-201ENST00000328560 KRTAP1-4P0C5Y4 121 aa8□□□□□ -1.13
ATP2C1-201ENST00000328560 SMR3BP02814 79 aaPredicted RBP7.98□□□□□ -1.13
ATP2C1-201ENST00000328560 KRTAP21-3Q3LHN1 58 aa7.98□□□□□ -1.13
ATP2C1-201ENST00000328560 CDC42SE1Q9NRR8 79 aa7.95□□□□□ -1.14
ATP2C1-201ENST00000328560 SPINK1P00995 79 aa7.94□□□□□ -1.14
ATP2C1-201ENST00000328560 DMAC1Q96GE9 116 aa7.94□□□□□ -1.14
ATP2C1-201ENST00000328560 HYDINQ4G0P3 5121 aa7.94□□□□□ -1.14
ATP2C1-201ENST00000328560 KRTAP16-1A8MUX0 517 aa7.93□□□□□ -1.14
ATP2C1-201ENST00000328560 ATP11AUNQ6ZP68 121 aa7.93□□□□□ -1.14
ATP2C1-201ENST00000328560 LINC00304Q8N9R0 145 aa7.91□□□□□ -1.14
ATP2C1-201ENST00000328560 C7orf65Q6ZTY9 151 aa7.9□□□□□ -1.15
ATP2C1-201ENST00000328560 VPS13BQ7Z7G8 4022 aa7.89□□□□□ -1.15
ATP2C1-201ENST00000328560 A6NN06 94 aa7.88□□□□□ -1.15
ATP2C1-201ENST00000328560 A0A1B0GU69 56 aa7.88□□□□□ -1.15
ATP2C1-201ENST00000328560 PRAC1Q96KF2 57 aa7.87□□□□□ -1.15
ATP2C1-201ENST00000328560 PKD1P98161 4303 aa7.84□□□□□ -1.15
ATP2C1-201ENST00000328560 Q8N1X5 172 aa7.84□□□□□ -1.15
ATP2C1-201ENST00000328560 FAT2Q9NYQ8 4349 aa7.83□□□□□ -1.16
ATP2C1-201ENST00000328560 C9orf92A6NGG3 77 aa7.83□□□□□ -1.16
ATP2C1-201ENST00000328560 PKHD1P08F94 4074 aa7.77□□□□□ -1.16
ATP2C1-201ENST00000328560 LINC01554Q52M75 96 aa7.76□□□□□ -1.17
ATP2C1-201ENST00000328560 ADM2Q7Z4H4 148 aa7.74□□□□□ -1.17
ATP2C1-201ENST00000328560 RPS29P62273 56 aaKnown RBP7.72□□□□□ -1.17
ATP2C1-201ENST00000328560 MIR22HGQ0VDD5 57 aa7.7□□□□□ -1.18
ATP2C1-201ENST00000328560 UQCR11O14957 56 aa7.69□□□□□ -1.18
ATP2C1-201ENST00000328560 FAT1Q14517 4588 aa7.68□□□□□ -1.18
ATP2C1-201ENST00000328560 A0A1B0GVY2 172 aa7.66□□□□□ -1.18
ATP2C1-201ENST00000328560 SPATA8Q6RVD6 105 aa7.64□□□□□ -1.19
ATP2C1-201ENST00000328560 DYNC1H1Q14204 4646 aaKnown RBP7.63□□□□□ -1.19
ATP2C1-201ENST00000328560 SACSQ9NZJ4 4579 aa7.61□□□□□ -1.19
ATP2C1-201ENST00000328560 A8MUU9 505 aa7.58□□□□□ -1.2
ATP2C1-201ENST00000328560 C20orf166-AS1Q96NR2 134 aa7.57□□□□□ -1.2
ATP2C1-201ENST00000328560 DMBT1Q9UGM3 2413 aaPredicted RBP7.56□□□□□ -1.2
ATP2C1-201ENST00000328560 KRTAP10-4P60372 401 aaPredicted RBP7.55□□□□□ -1.2
ATP2C1-201ENST00000328560 FLG2Q5D862 2391 aaPredicted RBP7.53□□□□□ -1.2
ATP2C1-201ENST00000328560 KRTAP3-1Q9BYR8 98 aa7.53□□□□□ -1.2
ATP2C1-201ENST00000328560 Q5VSD8 79 aa7.52□□□□□ -1.21
ATP2C1-201ENST00000328560 A0A0A0MQY5 61 aa7.51□□□□□ -1.21
ATP2C1-201ENST00000328560 APOBP04114 4563 aaKnown RBP7.47□□□□□ -1.21
ATP2C1-201ENST00000328560 CSAG1Q6PB30 78 aa7.44□□□□□ -1.22
ATP2C1-201ENST00000328560 A0A1B0GU33 70 aa7.43□□□□□ -1.22
ATP2C1-201ENST00000328560 H0YAA0 97 aa7.42□□□□□ -1.22
ATP2C1-201ENST00000328560 COX6B2Q6YFQ2 88 aa7.4□□□□□ -1.22
ATP2C1-201ENST00000328560 LRP1Q07954 4544 aaKnown RBP7.39□□□□□ -1.23
ATP2C1-201ENST00000328560 KMT2CQ8NEZ4 4911 aaKnown RBP7.37□□□□□ -1.23
ATP2C1-201ENST00000328560 PKHD1L1Q86WI1 4243 aa7.37□□□□□ -1.23
ATP2C1-201ENST00000328560 H1FX-AS1Q4G0G2 97 aa7.36□□□□□ -1.23
ATP2C1-201ENST00000328560 KRTAP10-8P60410 259 aa7.36□□□□□ -1.23
ATP2C1-201ENST00000328560 RYR2Q92736 4967 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms