RNA–Protein interactions for RNA: ENST00000326974.8

KLHDC3-202, Transcript of kelch domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLHDC3, Length 1,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-202ENST00000326974 C5orf47Q569G3 176 aa9.8□□□□□ -0.84
KLHDC3-202ENST00000326974 RPS28P62857 69 aaKnown RBP9.8□□□□□ -0.84
KLHDC3-202ENST00000326974 SMR3BP02814 79 aaPredicted RBP9.78□□□□□ -0.84
KLHDC3-202ENST00000326974 H0Y9P7 68 aa9.75□□□□□ -0.85
KLHDC3-202ENST00000326974 CDK2AP2O75956 126 aa9.75□□□□□ -0.85
KLHDC3-202ENST00000326974 LINC00208Q96KT6 92 aa9.73□□□□□ -0.85
KLHDC3-202ENST00000326974 PLA2G1BP04054 148 aaKnown RBP9.72□□□□□ -0.85
KLHDC3-202ENST00000326974 KRTAP10-4P60372 401 aaPredicted RBP9.72□□□□□ -0.85
KLHDC3-202ENST00000326974 PKHD1L1Q86WI1 4243 aa9.71□□□□□ -0.86
KLHDC3-202ENST00000326974 MP68P56378 58 aa9.71□□□□□ -0.86
KLHDC3-202ENST00000326974 SERP1Q9Y6X1 66 aa9.71□□□□□ -0.86
KLHDC3-202ENST00000326974 C1orf195Q5TG92 126 aa9.7□□□□□ -0.86
KLHDC3-202ENST00000326974 Q5XG85 94 aa9.7□□□□□ -0.86
KLHDC3-202ENST00000326974 MRPL34Q9BQ48 92 aaKnown RBP9.7□□□□□ -0.86
KLHDC3-202ENST00000326974 TRAV22A0A0B4J277 110 aa9.69□□□□□ -0.86
KLHDC3-202ENST00000326974 ATP5EP56381 51 aaPredicted RBP9.68□□□□□ -0.86
KLHDC3-202ENST00000326974 PRR26Q8N8Z3 221 aa9.66□□□□□ -0.86
KLHDC3-202ENST00000326974 TYMSOSQ8TAI1 123 aa9.66□□□□□ -0.86
KLHDC3-202ENST00000326974 NDUFS5O43920 106 aa9.65□□□□□ -0.86
KLHDC3-202ENST00000326974 EPPK1P58107 5090 aaKnown RBP9.64□□□□□ -0.87
KLHDC3-202ENST00000326974 C1orf64Q8NEQ6 169 aa9.64□□□□□ -0.87
KLHDC3-202ENST00000326974 H3BPC8 53 aa9.63□□□□□ -0.87
KLHDC3-202ENST00000326974 TP53AIP1Q9HCN2 124 aa9.63□□□□□ -0.87
KLHDC3-202ENST00000326974 PRR4Q16378 134 aa9.62□□□□□ -0.87
KLHDC3-202ENST00000326974 HSPG2P98160 4391 aa9.6□□□□□ -0.87
KLHDC3-202ENST00000326974 LIMD2Q9BT23 127 aa9.6□□□□□ -0.87
KLHDC3-202ENST00000326974 C8orf87E5RJ46 101 aa9.59□□□□□ -0.87
KLHDC3-202ENST00000326974 Q5W150 140 aa9.58□□□□□ -0.88
KLHDC3-202ENST00000326974 KRTAP13-3Q3SY46 172 aa9.57□□□□□ -0.88
KLHDC3-202ENST00000326974 SPINK1P00995 79 aa9.56□□□□□ -0.88
KLHDC3-202ENST00000326974 KRTAP16-1A8MUX0 517 aa9.55□□□□□ -0.88
KLHDC3-202ENST00000326974 LINC00313P59037 77 aa9.55□□□□□ -0.88
KLHDC3-202ENST00000326974 C4orf48Q5BLP8 95 aa9.55□□□□□ -0.88
KLHDC3-202ENST00000326974 LINC00304Q8N9R0 145 aa9.55□□□□□ -0.88
KLHDC3-202ENST00000326974 CYP4F30PQ9H0H9 118 aa9.54□□□□□ -0.88
KLHDC3-202ENST00000326974 FP248Q71RG6 208 aaPredicted RBP9.54□□□□□ -0.88
KLHDC3-202ENST00000326974 PCOTHQ58A44 107 aa9.52□□□□□ -0.89
KLHDC3-202ENST00000326974 RYR1P21817 5038 aa9.51□□□□□ -0.89
KLHDC3-202ENST00000326974 Q8N9P0 234 aaPredicted RBP9.5□□□□□ -0.89
KLHDC3-202ENST00000326974 SPANXA2-OT1Q8N9U9 137 aa9.5□□□□□ -0.89
KLHDC3-202ENST00000326974 SMIM26A0A096LP01 95 aa9.48□□□□□ -0.89
KLHDC3-202ENST00000326974 C4orf26Q17RF5 130 aa9.48□□□□□ -0.89
KLHDC3-202ENST00000326974 LRP1Q07954 4544 aaKnown RBP9.48□□□□□ -0.89
KLHDC3-202ENST00000326974 KIAA1109Q2LD37 5005 aa9.47□□□□□ -0.89
KLHDC3-202ENST00000326974 RPS29P62273 56 aaKnown RBP9.46□□□□□ -0.9
KLHDC3-202ENST00000326974 RETNLBQ9BQ08 111 aa9.45□□□□□ -0.9
KLHDC3-202ENST00000326974 TNXBP22105 4242 aa9.45□□□□□ -0.9
KLHDC3-202ENST00000326974 SPAG11AQ6PDA7 123 aa9.44□□□□□ -0.9
KLHDC3-202ENST00000326974 KRTAP17-1Q9BYP8 105 aa9.44□□□□□ -0.9
KLHDC3-202ENST00000326974 IGLV7-46A0A075B6I9 117 aa9.43□□□□□ -0.9
KLHDC3-202ENST00000326974 LOC101927531A0A1B0GV80 90 aa9.41□□□□□ -0.9
KLHDC3-202ENST00000326974 FAT3Q8TDW7 4589 aa9.39□□□□□ -0.91
KLHDC3-202ENST00000326974 FAM229AH3BQW9 127 aa9.39□□□□□ -0.91
KLHDC3-202ENST00000326974 MPLKIPQ8TAP9 179 aa9.37□□□□□ -0.91
KLHDC3-202ENST00000326974 BIRC6Q9NR09 4857 aa9.36□□□□□ -0.91
KLHDC3-202ENST00000326974 Q5VSD8 79 aa9.36□□□□□ -0.91
KLHDC3-202ENST00000326974 FLG2Q5D862 2391 aaPredicted RBP9.35□□□□□ -0.91
KLHDC3-202ENST00000326974 SVIPQ8NHG7 77 aa9.35□□□□□ -0.91
KLHDC3-202ENST00000326974 IGKV2-30P06310 120 aa9.33□□□□□ -0.92
KLHDC3-202ENST00000326974 COA5Q86WW8 74 aa9.31□□□□□ -0.92
KLHDC3-202ENST00000326974 Q8N1X5 172 aa9.31□□□□□ -0.92
KLHDC3-202ENST00000326974 C9orf92A6NGG3 77 aa9.29□□□□□ -0.92
KLHDC3-202ENST00000326974 HRES1P13985 223 aa9.28□□□□□ -0.92
KLHDC3-202ENST00000326974 KRTAP10-8P60410 259 aa9.26□□□□□ -0.93
KLHDC3-202ENST00000326974 MYCBP2O75592 4640 aa9.24□□□□□ -0.93
KLHDC3-202ENST00000326974 IGKV2D-30A0A075B6S6 120 aa9.23□□□□□ -0.93
KLHDC3-202ENST00000326974 Q1T7F1 81 aa9.23□□□□□ -0.93
KLHDC3-202ENST00000326974 HERC2O95714 4834 aa9.2□□□□□ -0.94
KLHDC3-202ENST00000326974 A8MUU9 505 aa9.19□□□□□ -0.94
KLHDC3-202ENST00000326974 C20orf166-AS1Q96NR2 134 aa9.19□□□□□ -0.94
KLHDC3-202ENST00000326974 KRTAP4-5Q9BYR2 181 aa9.19□□□□□ -0.94
KLHDC3-202ENST00000326974 DMAC1Q96GE9 116 aa9.17□□□□□ -0.94
KLHDC3-202ENST00000326974 PSPHP1O15172 72 aa9.15□□□□□ -0.95
KLHDC3-202ENST00000326974 A8MUN3 132 aa9.11□□□□□ -0.95
KLHDC3-202ENST00000326974 MT1HL1P0DM35 61 aa9.11□□□□□ -0.95
KLHDC3-202ENST00000326974 DMBT1Q9UGM3 2413 aaPredicted RBP9.11□□□□□ -0.95
KLHDC3-202ENST00000326974 C7orf65Q6ZTY9 151 aa9.09□□□□□ -0.95
KLHDC3-202ENST00000326974 ACYP2P14621 99 aa9.09□□□□□ -0.95
KLHDC3-202ENST00000326974 ABCA13Q86UQ4 5058 aa9.08□□□□□ -0.96
KLHDC3-202ENST00000326974 Q5VV11 94 aa9.06□□□□□ -0.96
KLHDC3-202ENST00000326974 V9GYY9 64 aa9.05□□□□□ -0.96
KLHDC3-202ENST00000326974 PRR15LQ9BU68 103 aa9.03□□□□□ -0.96
KLHDC3-202ENST00000326974 Q75L30 129 aa9.03□□□□□ -0.96
KLHDC3-202ENST00000326974 LINC01558Q9Y6Z2 57 aa9□□□□□ -0.97
KLHDC3-202ENST00000326974 BRK1Q8WUW1 75 aa8.99□□□□□ -0.97
KLHDC3-202ENST00000326974 CHKB-CPT1BH3BT56 60 aa8.97□□□□□ -0.97
KLHDC3-202ENST00000326974 SPINK7P58062 85 aa8.95□□□□□ -0.98
KLHDC3-202ENST00000326974 XP32Q5T750 250 aa8.93□□□□□ -0.98
KLHDC3-202ENST00000326974 KRTAP3-1Q9BYR8 98 aa8.93□□□□□ -0.98
KLHDC3-202ENST00000326974 PRO0628Q9UI54 55 aa8.92□□□□□ -0.98
KLHDC3-202ENST00000326974 A8MU10 97 aa8.9□□□□□ -0.98
KLHDC3-202ENST00000326974 RPL37P61927 97 aaKnown RBP8.9□□□□□ -0.98
KLHDC3-202ENST00000326974 PCLOQ9Y6V0 5065 aa8.85□□□□□ -0.99
KLHDC3-202ENST00000326974 ATP11AUNQ6ZP68 121 aa8.84□□□□□ -1
KLHDC3-202ENST00000326974 LRP2P98164 4655 aa8.83□□□□□ -1
KLHDC3-202ENST00000326974 LPAP08519 4548 aa8.82□□□□□ -1
KLHDC3-202ENST00000326974 J3QL48 77 aa8.8□□□□□ -1
KLHDC3-202ENST00000326974 A6NED7 52 aa8.78□□□□□ -1
KLHDC3-202ENST00000326974 LCA10Q71F78 164 aa8.78□□□□□ -1
KLHDC3-202ENST00000326974 COX6B2Q6YFQ2 88 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms