RNA–Protein interactions for RNA: ENST00000324849.8

VPS37A-201, Transcript of VPS37A, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37A, Length 4,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-201ENST00000324849 DCHS1Q96JQ0 3298 aa10.13□□□□□ -0.79
VPS37A-201ENST00000324849 KRTAP21-3Q3LHN1 58 aa10.13□□□□□ -0.79
VPS37A-201ENST00000324849 H1FX-AS1Q4G0G2 97 aa10.13□□□□□ -0.79
VPS37A-201ENST00000324849 KRTAP29-1A8MX34 341 aaPredicted RBP10.11□□□□□ -0.79
VPS37A-201ENST00000324849 ADM2Q7Z4H4 148 aa10.1□□□□□ -0.79
VPS37A-201ENST00000324849 ASB16-AS1Q495Z4 193 aa10.1□□□□□ -0.79
VPS37A-201ENST00000324849 ROMO1P60602 79 aa10.07□□□□□ -0.8
VPS37A-201ENST00000324849 PRAC1Q96KF2 57 aa10.07□□□□□ -0.8
VPS37A-201ENST00000324849 TNRC18O15417 2968 aaPredicted RBP10.06□□□□□ -0.8
VPS37A-201ENST00000324849 UTP20O75691 2785 aaKnown RBP10.04□□□□□ -0.8
VPS37A-201ENST00000324849 DMXL1Q9Y485 3027 aa10.03□□□□□ -0.8
VPS37A-201ENST00000324849 NIPBLQ6KC79 2804 aaeCLIP10.03□□□□□ -0.8
VPS37A-201ENST00000324849 KRTAP11-1Q8IUC1 163 aa10□□□□□ -0.81
VPS37A-201ENST00000324849 NOTCH2NLQ7Z3S9 236 aa10□□□□□ -0.81
VPS37A-201ENST00000324849 A0A0A0MQY5 61 aa10□□□□□ -0.81
VPS37A-201ENST00000324849 ASPMQ8IZT6 3477 aa9.99□□□□□ -0.81
VPS37A-201ENST00000324849 ZFHX4Q86UP3 3567 aa9.96□□□□□ -0.82
VPS37A-201ENST00000324849 SPATA8Q6RVD6 105 aa9.95□□□□□ -0.82
VPS37A-201ENST00000324849 KRTAP13-2Q52LG2 175 aa9.92□□□□□ -0.82
VPS37A-201ENST00000324849 TENM3Q9P273 2699 aa9.9□□□□□ -0.82
VPS37A-201ENST00000324849 ZANQ9Y493 2812 aa9.9□□□□□ -0.83
VPS37A-201ENST00000324849 KRTAP7-1Q8IUC3 87 aa9.89□□□□□ -0.83
VPS37A-201ENST00000324849 APCP25054 2843 aa9.89□□□□□ -0.83
VPS37A-201ENST00000324849 A8MUU9 505 aa9.87□□□□□ -0.83
VPS37A-201ENST00000324849 KRTAP13-1Q8IUC0 172 aa9.87□□□□□ -0.83
VPS37A-201ENST00000324849 C20orf166-AS1Q96NR2 134 aa9.87□□□□□ -0.83
VPS37A-201ENST00000324849 CRYBG3Q68DQ2 2970 aa9.84□□□□□ -0.83
VPS37A-201ENST00000324849 CELSR2Q9HCU4 2923 aa9.82□□□□□ -0.84
VPS37A-201ENST00000324849 HRNRQ86YZ3 2850 aaPredicted RBP9.78□□□□□ -0.84
VPS37A-201ENST00000324849 RELNP78509 3460 aa9.78□□□□□ -0.84
VPS37A-201ENST00000324849 LAMA5O15230 3695 aa9.77□□□□□ -0.85
VPS37A-201ENST00000324849 DMDP11532 3685 aa9.76□□□□□ -0.85
VPS37A-201ENST00000324849 MUC3AQ02505 3323 aa9.74□□□□□ -0.85
VPS37A-201ENST00000324849 FBN2P35556 2912 aa9.72□□□□□ -0.85
VPS37A-201ENST00000324849 CSMD1Q96PZ7 3565 aa9.72□□□□□ -0.85
VPS37A-201ENST00000324849 NF1P21359 2839 aa9.71□□□□□ -0.85
VPS37A-201ENST00000324849 H3BS24 57 aa9.69□□□□□ -0.86
VPS37A-201ENST00000324849 DCHS2Q6V1P9 2916 aa9.69□□□□□ -0.86
VPS37A-201ENST00000324849 SMG1Q96Q15 3661 aaKnown RBP9.69□□□□□ -0.86
VPS37A-201ENST00000324849 TENM1Q9UKZ4 2725 aa9.64□□□□□ -0.87
VPS37A-201ENST00000324849 A8MU10 97 aa9.63□□□□□ -0.87
VPS37A-201ENST00000324849 TNP1P09430 55 aa9.56□□□□□ -0.88
VPS37A-201ENST00000324849 SVEP1Q4LDE5 3571 aa9.51□□□□□ -0.89
VPS37A-201ENST00000324849 TENM2Q9NT68 2774 aa9.5□□□□□ -0.89
VPS37A-201ENST00000324849 MXRA5Q9NR99 2828 aa9.5□□□□□ -0.89
VPS37A-201ENST00000324849 KRTAP1-4P0C5Y4 121 aa9.46□□□□□ -0.9
VPS37A-201ENST00000324849 KRTAP25-1Q3LHN0 102 aa9.45□□□□□ -0.9
VPS37A-201ENST00000324849 CELSR1Q9NYQ6 3014 aa9.45□□□□□ -0.9
VPS37A-201ENST00000324849 XP32Q5T750 250 aa9.45□□□□□ -0.9
VPS37A-201ENST00000324849 CUBNO60494 3623 aa9.43□□□□□ -0.9
VPS37A-201ENST00000324849 TPRXLQ17RH7 258 aa9.37□□□□□ -0.91
VPS37A-201ENST00000324849 A6NN06 94 aa9.35□□□□□ -0.91
VPS37A-201ENST00000324849 SPENQ96T58 3664 aaKnown RBP9.34□□□□□ -0.91
VPS37A-201ENST00000324849 KRTAP10-8P60410 259 aa9.34□□□□□ -0.91
VPS37A-201ENST00000324849 PKD1L1Q8TDX9 2849 aa9.33□□□□□ -0.92
VPS37A-201ENST00000324849 KRTAP16-1A8MUX0 517 aa9.3□□□□□ -0.92
VPS37A-201ENST00000324849 A0A1B0GVY2 172 aa9.28□□□□□ -0.92
VPS37A-201ENST00000324849 PP632Q6XCG6 107 aa9.23□□□□□ -0.93
VPS37A-201ENST00000324849 KRTAP10-10P60014 251 aa9.22□□□□□ -0.93
VPS37A-201ENST00000324849 C10orf95Q9H7T3 257 aa9.18□□□□□ -0.94
VPS37A-201ENST00000324849 PDZD2O15018 2839 aa9.16□□□□□ -0.94
VPS37A-201ENST00000324849 KRTAP13-3Q3SY46 172 aa9.14□□□□□ -0.95
VPS37A-201ENST00000324849 NDUFAF8A1L188 74 aa9.13□□□□□ -0.95
VPS37A-201ENST00000324849 PRO2289Q9P1D8 64 aa9.12□□□□□ -0.95
VPS37A-201ENST00000324849 VWFP04275 2813 aa9.08□□□□□ -0.96
VPS37A-201ENST00000324849 TGP01266 2768 aa9.01□□□□□ -0.97
VPS37A-201ENST00000324849 SRRM2Q9UQ35 2752 aaKnown RBP8.99□□□□□ -0.97
VPS37A-201ENST00000324849 H0YAA0 97 aa8.93□□□□□ -0.98
VPS37A-201ENST00000324849 P0C880 135 aa8.9□□□□□ -0.98
VPS37A-201ENST00000324849 FBN1P35555 2871 aaKnown RBP8.82□□□□□ -1
VPS37A-201ENST00000324849 CSMD2Q7Z408 3487 aa8.81□□□□□ -1
VPS37A-201ENST00000324849 BSNQ9UPA5 3926 aa8.76□□□□□ -1.01
VPS37A-201ENST00000324849 NBPF19A0A087WUL8 3843 aa8.67□□□□□ -1.02
VPS37A-201ENST00000324849 FBN3Q75N90 2809 aa8.65□□□□□ -1.02
VPS37A-201ENST00000324849 OTOGQ6ZRI0 2925 aa8.61□□□□□ -1.03
VPS37A-201ENST00000324849 VPS13CQ709C8 3753 aa8.54□□□□□ -1.04
VPS37A-201ENST00000324849 ZFHX3Q15911 3703 aa8.52□□□□□ -1.05
VPS37A-201ENST00000324849 TRRAPQ9Y4A5 3859 aa8.45□□□□□ -1.06
VPS37A-201ENST00000324849 KRTAP13-4Q3LI77 160 aa8.43□□□□□ -1.06
VPS37A-201ENST00000324849 KRTAP12-2P59991 146 aa8.43□□□□□ -1.06
VPS37A-201ENST00000324849 COL7A1Q02388 2944 aa8.35□□□□□ -1.07
VPS37A-201ENST00000324849 KRTAP12-1P59990 96 aa8.35□□□□□ -1.07
VPS37A-201ENST00000324849 KRTAP3-1Q9BYR8 98 aa8.3□□□□□ -1.08
VPS37A-201ENST00000324849 MEGF8Q7Z7M0 2845 aa8.26□□□□□ -1.09
VPS37A-201ENST00000324849 ANK3Q12955 4377 aaKnown RBP8.2□□□□□ -1.1
VPS37A-201ENST00000324849 MT1HL1P0DM35 61 aa8.19□□□□□ -1.1
VPS37A-201ENST00000324849 KRTAP15-1Q3LI76 137 aa8.16□□□□□ -1.1
VPS37A-201ENST00000324849 ZNF469Q96JG9 3925 aaPredicted RBP8.12□□□□□ -1.11
VPS37A-201ENST00000324849 CSMD3Q7Z407 3707 aa8.1□□□□□ -1.11
VPS37A-201ENST00000324849 KRTAP10-6P60371 365 aaPredicted RBP8.08□□□□□ -1.12
VPS37A-201ENST00000324849 AKAP9Q99996 3911 aa7.96□□□□□ -1.14
VPS37A-201ENST00000324849 KRTAP4-5Q9BYR2 181 aa7.9□□□□□ -1.15
VPS37A-201ENST00000324849 KRTAP10-12P60413 245 aa7.85□□□□□ -1.15
VPS37A-201ENST00000324849 KRTAP10-4P60372 401 aaPredicted RBP7.84□□□□□ -1.15
VPS37A-201ENST00000324849 KRTAP3-2Q9BYR7 98 aa7.75□□□□□ -1.17
VPS37A-201ENST00000324849 KRTAP3-3Q9BYR6 98 aa7.75□□□□□ -1.17
VPS37A-201ENST00000324849 CRCT1Q9UGL9 99 aa7.71□□□□□ -1.18
VPS37A-201ENST00000324849 HUWE1Q7Z6Z7 4374 aaKnown RBP7.65□□□□□ -1.19
VPS37A-201ENST00000324849 KRTAP12-3P60328 96 aa7.61□□□□□ -1.19
VPS37A-201ENST00000324849 DNAH10Q8IVF4 4471 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms