RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 KRTAP1-5Q9BYS1 174 aa4.63□□□□□ -1.67
CD46-201ENST00000322875 OXLD1Q5BKU9 147 aa4.63□□□□□ -1.67
CD46-201ENST00000322875 DNAH9Q9NYC9 4486 aa4.62□□□□□ -1.67
CD46-201ENST00000322875 WWC2-AS2Q96NR7 200 aa4.59□□□□□ -1.67
CD46-201ENST00000322875 IGLV9-49A0A0B4J1Y8 123 aa4.59□□□□□ -1.68
CD46-201ENST00000322875 A0A1B0GU69 56 aa4.57□□□□□ -1.68
CD46-201ENST00000322875 PANO1I0J062 215 aa4.57□□□□□ -1.68
CD46-201ENST00000322875 H3BS24 57 aa4.57□□□□□ -1.68
CD46-201ENST00000322875 MIR22HGQ0VDD5 57 aa4.56□□□□□ -1.68
CD46-201ENST00000322875 HUWE1Q7Z6Z7 4374 aaKnown RBP4.56□□□□□ -1.68
CD46-201ENST00000322875 CDK2AP2O75956 126 aa4.55□□□□□ -1.68
CD46-201ENST00000322875 C14orf177Q52M58 125 aa4.55□□□□□ -1.68
CD46-201ENST00000322875 UQCR11O14957 56 aa4.54□□□□□ -1.68
CD46-201ENST00000322875 CSAG1Q6PB30 78 aa4.53□□□□□ -1.68
CD46-201ENST00000322875 ZNF861PO60384 105 aa4.52□□□□□ -1.69
CD46-201ENST00000322875 DNAH8Q96JB1 4490 aa4.52□□□□□ -1.69
CD46-201ENST00000322875 SPACA4Q8TDM5 124 aa4.52□□□□□ -1.69
CD46-201ENST00000322875 RETNLBQ9BQ08 111 aa4.52□□□□□ -1.69
CD46-201ENST00000322875 ZNF706Q9Y5V0 76 aaPredicted RBP4.52□□□□□ -1.69
CD46-201ENST00000322875 NBEAL1Q6ZS30 2694 aa4.52□□□□□ -1.69
CD46-201ENST00000322875 IGKV2-30P06310 120 aa4.52□□□□□ -1.69
CD46-201ENST00000322875 MGAM2Q2M2H8 2515 aa4.51□□□□□ -1.69
CD46-201ENST00000322875 DYNC2H1Q8NCM8 4307 aaKnown RBP4.51□□□□□ -1.69
CD46-201ENST00000322875 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.5□□□□□ -1.69
CD46-201ENST00000322875 COL7A1Q02388 2944 aa4.49□□□□□ -1.69
CD46-201ENST00000322875 FRAS1Q86XX4 4008 aa4.49□□□□□ -1.69
CD46-201ENST00000322875 DNAH7Q8WXX0 4024 aa4.49□□□□□ -1.69
CD46-201ENST00000322875 FAM229AH3BQW9 127 aa4.48□□□□□ -1.69
CD46-201ENST00000322875 Q6ZRN7 208 aaPredicted RBP4.48□□□□□ -1.69
CD46-201ENST00000322875 IGLV7-43P04211 117 aa4.48□□□□□ -1.69
CD46-201ENST00000322875 ANAPC11Q9NYG5 84 aa4.48□□□□□ -1.69
CD46-201ENST00000322875 IGLV5-52A0A0A0MRZ9 124 aa4.48□□□□□ -1.69
CD46-201ENST00000322875 MEGF8Q7Z7M0 2845 aa4.47□□□□□ -1.69
CD46-201ENST00000322875 APLNQ9ULZ1 77 aa4.47□□□□□ -1.69
CD46-201ENST00000322875 PSORS1C2Q9UIG4 136 aa4.46□□□□□ -1.7
CD46-201ENST00000322875 KRTAP16-1A8MUX0 517 aa4.46□□□□□ -1.7
CD46-201ENST00000322875 SPINK6Q6UWN8 80 aa4.45□□□□□ -1.7
CD46-201ENST00000322875 NOTCH1P46531 2555 aa4.45□□□□□ -1.7
CD46-201ENST00000322875 A8MUU9 505 aa4.43□□□□□ -1.7
CD46-201ENST00000322875 HECTD4Q9Y4D8 3996 aa4.43□□□□□ -1.7
CD46-201ENST00000322875 IGKV2D-30A0A075B6S6 120 aa4.43□□□□□ -1.7
CD46-201ENST00000322875 VPS13DQ5THJ4 4388 aa4.42□□□□□ -1.7
CD46-201ENST00000322875 KRTAP25-1Q3LHN0 102 aa4.41□□□□□ -1.7
CD46-201ENST00000322875 NBDYA0A0U1RRE5 68 aa4.4□□□□□ -1.7
CD46-201ENST00000322875 SSBP3-AS1Q7Z2R9 100 aa4.4□□□□□ -1.71
CD46-201ENST00000322875 UBE2DNLQ8IWF7 75 aa4.4□□□□□ -1.71
CD46-201ENST00000322875 PRKDCP78527 4128 aaKnown RBP4.4□□□□□ -1.71
CD46-201ENST00000322875 C1orf134Q5TEV5 83 aa4.4□□□□□ -1.71
CD46-201ENST00000322875 H0YAA0 97 aa4.39□□□□□ -1.71
CD46-201ENST00000322875 DNAH17Q9UFH2 4485 aa4.39□□□□□ -1.71
CD46-201ENST00000322875 ROMO1P60602 79 aa4.38□□□□□ -1.71
CD46-201ENST00000322875 Q6ZSA8 131 aa4.38□□□□□ -1.71
CD46-201ENST00000322875 CIRBP-AS1Q8TBR5 109 aa4.38□□□□□ -1.71
CD46-201ENST00000322875 LY6G6CO95867 125 aa4.38□□□□□ -1.71
CD46-201ENST00000322875 LINC00304Q8N9R0 145 aa4.38□□□□□ -1.71
CD46-201ENST00000322875 A0A087WTM6 91 aa4.36□□□□□ -1.71
CD46-201ENST00000322875 PLECQ15149 4684 aaKnown RBP4.35□□□□□ -1.71
CD46-201ENST00000322875 TGP01266 2768 aa4.34□□□□□ -1.72
CD46-201ENST00000322875 KRTAP13-2Q52LG2 175 aa4.33□□□□□ -1.72
CD46-201ENST00000322875 TYMSOSQ8TAI1 123 aa4.3□□□□□ -1.72
CD46-201ENST00000322875 DNAH2Q9P225 4427 aa4.3□□□□□ -1.72
CD46-201ENST00000322875 P0C880 135 aa4.29□□□□□ -1.72
CD46-201ENST00000322875 KMT2AQ03164 3969 aa4.28□□□□□ -1.72
CD46-201ENST00000322875 STAB2Q8WWQ8 2551 aa4.28□□□□□ -1.72
CD46-201ENST00000322875 SPINK1P00995 79 aa4.28□□□□□ -1.72
CD46-201ENST00000322875 DNAH6Q9C0G6 4158 aa4.28□□□□□ -1.72
CD46-201ENST00000322875 Q8N1X5 172 aa4.27□□□□□ -1.73
CD46-201ENST00000322875 A0A1B0GU33 70 aa4.27□□□□□ -1.73
CD46-201ENST00000322875 H1FX-AS1Q4G0G2 97 aa4.27□□□□□ -1.73
CD46-201ENST00000322875 NUPR2A6NF83 97 aa4.26□□□□□ -1.73
CD46-201ENST00000322875 KRTAP3-1Q9BYR8 98 aa4.25□□□□□ -1.73
CD46-201ENST00000322875 DNAH11Q96DT5 4516 aa4.25□□□□□ -1.73
CD46-201ENST00000322875 STARD9Q9P2P6 4700 aa4.25□□□□□ -1.73
CD46-201ENST00000322875 KRTAP1-4P0C5Y4 121 aa4.24□□□□□ -1.73
CD46-201ENST00000322875 DNAH5Q8TE73 4624 aa4.19□□□□□ -1.74
CD46-201ENST00000322875 CRIPTQ9P021 101 aa4.18□□□□□ -1.74
CD46-201ENST00000322875 COX6B2Q6YFQ2 88 aa4.18□□□□□ -1.74
CD46-201ENST00000322875 LRP1BQ9NZR2 4599 aa4.16□□□□□ -1.74
CD46-201ENST00000322875 KMT2CQ8NEZ4 4911 aaKnown RBP4.16□□□□□ -1.74
CD46-201ENST00000322875 RYR2Q92736 4967 aa4.16□□□□□ -1.74
CD46-201ENST00000322875 C20orf166-AS1Q96NR2 134 aa4.15□□□□□ -1.75
CD46-201ENST00000322875 TPRXLQ17RH7 258 aa4.15□□□□□ -1.75
CD46-201ENST00000322875 RPS29P62273 56 aaKnown RBP4.14□□□□□ -1.75
CD46-201ENST00000322875 SACSQ9NZJ4 4579 aa4.14□□□□□ -1.75
CD46-201ENST00000322875 K7ERS5 55 aa4.14□□□□□ -1.75
CD46-201ENST00000322875 PKD1P98161 4303 aa4.14□□□□□ -1.75
CD46-201ENST00000322875 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
CD46-201ENST00000322875 RYR3Q15413 4870 aa4.13□□□□□ -1.75
CD46-201ENST00000322875 KRTAP10-2P60368 255 aa4.12□□□□□ -1.75
CD46-201ENST00000322875 VPS13BQ7Z7G8 4022 aa4.12□□□□□ -1.75
CD46-201ENST00000322875 KRTAP10-6P60371 365 aaPredicted RBP4.11□□□□□ -1.75
CD46-201ENST00000322875 BIRC6Q9NR09 4857 aa4.1□□□□□ -1.75
CD46-201ENST00000322875 FLG2Q5D862 2391 aaPredicted RBP4.1□□□□□ -1.75
CD46-201ENST00000322875 RPL37P61927 97 aaKnown RBP4.09□□□□□ -1.75
CD46-201ENST00000322875 KRTAP13-4Q3LI77 160 aa4.09□□□□□ -1.75
CD46-201ENST00000322875 KRTAP10-1P60331 282 aa4.08□□□□□ -1.76
CD46-201ENST00000322875 KRTAP3-3Q9BYR6 98 aa4.06□□□□□ -1.76
CD46-201ENST00000322875 KRTAP3-2Q9BYR7 98 aa4.06□□□□□ -1.76
CD46-201ENST00000322875 PKHD1L1Q86WI1 4243 aa4.06□□□□□ -1.76
CD46-201ENST00000322875 FAT2Q9NYQ8 4349 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms