RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 Q5W150 140 aa8.55□□□□□ -1.04
PABPC1-201ENST00000318607 KRTAP21-3Q3LHN1 58 aa8.55□□□□□ -1.04
PABPC1-201ENST00000318607 Q75L30 129 aa8.55□□□□□ -1.04
PABPC1-201ENST00000318607 A0A1B0GVX0 72 aa8.55□□□□□ -1.04
PABPC1-201ENST00000318607 A6NN06 94 aa8.55□□□□□ -1.04
PABPC1-201ENST00000318607 H3BPC8 53 aa8.54□□□□□ -1.04
PABPC1-201ENST00000318607 MEGF8Q7Z7M0 2845 aa8.54□□□□□ -1.04
PABPC1-201ENST00000318607 IGKV2D-30A0A075B6S6 120 aa8.53□□□□□ -1.04
PABPC1-201ENST00000318607 IGKV2-30P06310 120 aa8.53□□□□□ -1.04
PABPC1-201ENST00000318607 CDC42SE1Q9NRR8 79 aa8.53□□□□□ -1.04
PABPC1-201ENST00000318607 PSORS1C2Q9UIG4 136 aa8.53□□□□□ -1.04
PABPC1-201ENST00000318607 C14orf177Q52M58 125 aa8.52□□□□□ -1.05
PABPC1-201ENST00000318607 DNAH1Q9P2D7 4330 aa8.52□□□□□ -1.05
PABPC1-201ENST00000318607 TP53AIP1Q9HCN2 124 aa8.49□□□□□ -1.05
PABPC1-201ENST00000318607 NBDYA0A0U1RRE5 68 aa8.48□□□□□ -1.05
PABPC1-201ENST00000318607 RTL8CO15255 209 aa8.48□□□□□ -1.05
PABPC1-201ENST00000318607 Q96NJ1 140 aa8.48□□□□□ -1.05
PABPC1-201ENST00000318607 DNAH7Q8WXX0 4024 aa8.46□□□□□ -1.05
PABPC1-201ENST00000318607 A0A1B0GU69 56 aa8.46□□□□□ -1.06
PABPC1-201ENST00000318607 LINC01558Q9Y6Z2 57 aa8.45□□□□□ -1.06
PABPC1-201ENST00000318607 DNAH9Q9NYC9 4486 aa8.44□□□□□ -1.06
PABPC1-201ENST00000318607 APLNQ9ULZ1 77 aa8.43□□□□□ -1.06
PABPC1-201ENST00000318607 SPACA4Q8TDM5 124 aa8.42□□□□□ -1.06
PABPC1-201ENST00000318607 SPRR1BP22528 89 aa8.42□□□□□ -1.06
PABPC1-201ENST00000318607 WWC2-AS2Q96NR7 200 aa8.41□□□□□ -1.06
PABPC1-201ENST00000318607 ACYP2P14621 99 aa8.4□□□□□ -1.06
PABPC1-201ENST00000318607 HUWE1Q7Z6Z7 4374 aaKnown RBP8.39□□□□□ -1.07
PABPC1-201ENST00000318607 FRAS1Q86XX4 4008 aa8.39□□□□□ -1.07
PABPC1-201ENST00000318607 IGLV5-52A0A0A0MRZ9 124 aa8.38□□□□□ -1.07
PABPC1-201ENST00000318607 ZNF861PO60384 105 aa8.35□□□□□ -1.07
PABPC1-201ENST00000318607 LY6G6CO95867 125 aa8.35□□□□□ -1.07
PABPC1-201ENST00000318607 Q8N1X5 172 aa8.35□□□□□ -1.07
PABPC1-201ENST00000318607 A0A087WTM6 91 aa8.35□□□□□ -1.07
PABPC1-201ENST00000318607 C1orf134Q5TEV5 83 aa8.35□□□□□ -1.07
PABPC1-201ENST00000318607 Q6ZR54 194 aa8.35□□□□□ -1.07
PABPC1-201ENST00000318607 PRKDCP78527 4128 aaKnown RBP8.34□□□□□ -1.07
PABPC1-201ENST00000318607 KRTAP13-1Q8IUC0 172 aa8.31□□□□□ -1.08
PABPC1-201ENST00000318607 CSAG1Q6PB30 78 aa8.3□□□□□ -1.08
PABPC1-201ENST00000318607 MIR22HGQ0VDD5 57 aa8.29□□□□□ -1.08
PABPC1-201ENST00000318607 CRIPTQ9P021 101 aa8.29□□□□□ -1.08
PABPC1-201ENST00000318607 NUPR2A6NF83 97 aa8.29□□□□□ -1.08
PABPC1-201ENST00000318607 PLECQ15149 4684 aaKnown RBP8.27□□□□□ -1.09
PABPC1-201ENST00000318607 IGLV7-43P04211 117 aa8.23□□□□□ -1.09
PABPC1-201ENST00000318607 Q6ZRN7 208 aaPredicted RBP8.23□□□□□ -1.09
PABPC1-201ENST00000318607 UQCR11O14957 56 aa8.22□□□□□ -1.09
PABPC1-201ENST00000318607 ASB16-AS1Q495Z4 193 aa8.19□□□□□ -1.1
PABPC1-201ENST00000318607 FAM229AH3BQW9 127 aa8.19□□□□□ -1.1
PABPC1-201ENST00000318607 PLAC8Q9NZF1 115 aa8.19□□□□□ -1.1
PABPC1-201ENST00000318607 LINC00483Q53H64 154 aa8.17□□□□□ -1.1
PABPC1-201ENST00000318607 KMT2AQ03164 3969 aa8.17□□□□□ -1.1
PABPC1-201ENST00000318607 C9orf92A6NGG3 77 aa8.16□□□□□ -1.1
PABPC1-201ENST00000318607 ALMS1Q8TCU4 4167 aa8.15□□□□□ -1.11
PABPC1-201ENST00000318607 KRTAP10-2P60368 255 aa8.14□□□□□ -1.11
PABPC1-201ENST00000318607 DMAC1Q96GE9 116 aa8.13□□□□□ -1.11
PABPC1-201ENST00000318607 PKHD1L1Q86WI1 4243 aa8.12□□□□□ -1.11
PABPC1-201ENST00000318607 DNAH8Q96JB1 4490 aa8.12□□□□□ -1.11
PABPC1-201ENST00000318607 PLA2G1BP04054 148 aaKnown RBP8.1□□□□□ -1.11
PABPC1-201ENST00000318607 SMR3BP02814 79 aaPredicted RBP8.08□□□□□ -1.12
PABPC1-201ENST00000318607 STARD9Q9P2P6 4700 aa8.07□□□□□ -1.12
PABPC1-201ENST00000318607 KRTAP13-2Q52LG2 175 aa8.06□□□□□ -1.12
PABPC1-201ENST00000318607 KRTAP13-3Q3SY46 172 aa8.05□□□□□ -1.12
PABPC1-201ENST00000318607 SSBP3-AS1Q7Z2R9 100 aa8.05□□□□□ -1.12
PABPC1-201ENST00000318607 DNAH11Q96DT5 4516 aa8.04□□□□□ -1.12
PABPC1-201ENST00000318607 TYMSOSQ8TAI1 123 aa8.04□□□□□ -1.12
PABPC1-201ENST00000318607 DNAH17Q9UFH2 4485 aa8.03□□□□□ -1.12
PABPC1-201ENST00000318607 SPATA8Q6RVD6 105 aa8.03□□□□□ -1.12
PABPC1-201ENST00000318607 ROMO1P60602 79 aa8.01□□□□□ -1.13
PABPC1-201ENST00000318607 FAT2Q9NYQ8 4349 aa8□□□□□ -1.13
PABPC1-201ENST00000318607 KRTAP10-1P60331 282 aa7.97□□□□□ -1.13
PABPC1-201ENST00000318607 PKHD1P08F94 4074 aa7.96□□□□□ -1.14
PABPC1-201ENST00000318607 VPS13DQ5THJ4 4388 aa7.95□□□□□ -1.14
PABPC1-201ENST00000318607 A0A0D9SG42 100 aa7.94□□□□□ -1.14
PABPC1-201ENST00000318607 HECTD4Q9Y4D8 3996 aa7.93□□□□□ -1.14
PABPC1-201ENST00000318607 KRTAP16-1A8MUX0 517 aa7.93□□□□□ -1.14
PABPC1-201ENST00000318607 NDUFAF8A1L188 74 aa7.91□□□□□ -1.14
PABPC1-201ENST00000318607 LRP1BQ9NZR2 4599 aa7.91□□□□□ -1.14
PABPC1-201ENST00000318607 DNAH2Q9P225 4427 aa7.89□□□□□ -1.15
PABPC1-201ENST00000318607 A0A1B0GU33 70 aa7.87□□□□□ -1.15
PABPC1-201ENST00000318607 Q6ZSA8 131 aa7.87□□□□□ -1.15
PABPC1-201ENST00000318607 P0C880 135 aa7.86□□□□□ -1.15
PABPC1-201ENST00000318607 H0YAA0 97 aa7.84□□□□□ -1.15
PABPC1-201ENST00000318607 LINC00304Q8N9R0 145 aa7.82□□□□□ -1.16
PABPC1-201ENST00000318607 SPINT4Q6UDR6 99 aa7.8□□□□□ -1.16
PABPC1-201ENST00000318607 KRTAP1-4P0C5Y4 121 aa7.78□□□□□ -1.16
PABPC1-201ENST00000318607 K7ERS5 55 aa7.77□□□□□ -1.17
PABPC1-201ENST00000318607 LUZP6Q538Z0 58 aa7.73□□□□□ -1.17
PABPC1-201ENST00000318607 PKD1P98161 4303 aa7.73□□□□□ -1.17
PABPC1-201ENST00000318607 DNHD1Q96M86 4753 aa7.73□□□□□ -1.17
PABPC1-201ENST00000318607 VPS13BQ7Z7G8 4022 aa7.72□□□□□ -1.17
PABPC1-201ENST00000318607 KRTAP25-1Q3LHN0 102 aa7.7□□□□□ -1.18
PABPC1-201ENST00000318607 FAT1Q14517 4588 aa7.7□□□□□ -1.18
PABPC1-201ENST00000318607 H1FX-AS1Q4G0G2 97 aa7.69□□□□□ -1.18
PABPC1-201ENST00000318607 A8MUU9 505 aa7.68□□□□□ -1.18
PABPC1-201ENST00000318607 MYCBP2O75592 4640 aa7.67□□□□□ -1.18
PABPC1-201ENST00000318607 C10orf95Q9H7T3 257 aa7.66□□□□□ -1.18
PABPC1-201ENST00000318607 J3QL48 77 aa7.65□□□□□ -1.19
PABPC1-201ENST00000318607 KRTAP3-1Q9BYR8 98 aa7.64□□□□□ -1.19
PABPC1-201ENST00000318607 DNAH5Q8TE73 4624 aa7.63□□□□□ -1.19
PABPC1-201ENST00000318607 COX6B2Q6YFQ2 88 aa7.63□□□□□ -1.19
PABPC1-201ENST00000318607 C20orf166-AS1Q96NR2 134 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms