RNA–Protein interactions for RNA: ENST00000315127.8

EDC3-201, Transcript of enhancer of mRNA decapping 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC3, Length 3,763 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-201ENST00000315127 LINC00483Q53H64 154 aa8.21□□□□□ -1.1
EDC3-201ENST00000315127 C1orf195Q5TG92 126 aa8.21□□□□□ -1.1
EDC3-201ENST00000315127 KMT2AQ03164 3969 aa8.2□□□□□ -1.1
EDC3-201ENST00000315127 CMYA5Q8N3K9 4069 aa8.2□□□□□ -1.1
EDC3-201ENST00000315127 Q8N9P0 234 aaPredicted RBP8.19□□□□□ -1.1
EDC3-201ENST00000315127 C7orf65Q6ZTY9 151 aa8.18□□□□□ -1.1
EDC3-201ENST00000315127 OXTP01178 125 aa8.17□□□□□ -1.1
EDC3-201ENST00000315127 DNAH11Q96DT5 4516 aa8.17□□□□□ -1.1
EDC3-201ENST00000315127 A6NED7 52 aa8.17□□□□□ -1.1
EDC3-201ENST00000315127 KRTAP21-3Q3LHN1 58 aa8.17□□□□□ -1.1
EDC3-201ENST00000315127 Q8N1X5 172 aa8.17□□□□□ -1.1
EDC3-201ENST00000315127 FAM229BQ4G0N7 80 aa8.16□□□□□ -1.1
EDC3-201ENST00000315127 Q5VSD8 79 aa8.16□□□□□ -1.1
EDC3-201ENST00000315127 C8orf87E5RJ46 101 aa8.14□□□□□ -1.11
EDC3-201ENST00000315127 COA5Q86WW8 74 aa8.13□□□□□ -1.11
EDC3-201ENST00000315127 DNAH1Q9P2D7 4330 aa8.13□□□□□ -1.11
EDC3-201ENST00000315127 A8MUN3 132 aa8.12□□□□□ -1.11
EDC3-201ENST00000315127 KRTAP29-1A8MX34 341 aaPredicted RBP8.12□□□□□ -1.11
EDC3-201ENST00000315127 RPS28P62857 69 aaKnown RBP8.12□□□□□ -1.11
EDC3-201ENST00000315127 DNAH7Q8WXX0 4024 aa8.12□□□□□ -1.11
EDC3-201ENST00000315127 Q5W150 140 aa8.11□□□□□ -1.11
EDC3-201ENST00000315127 LOC101927531A0A1B0GV80 90 aa8.09□□□□□ -1.11
EDC3-201ENST00000315127 CD164Q04900 197 aa8.09□□□□□ -1.12
EDC3-201ENST00000315127 Q6ZSA8 131 aa8.08□□□□□ -1.12
EDC3-201ENST00000315127 H3BPC8 53 aa8.07□□□□□ -1.12
EDC3-201ENST00000315127 J3QL48 77 aa8.05□□□□□ -1.12
EDC3-201ENST00000315127 ACYP2P14621 99 aa8.03□□□□□ -1.12
EDC3-201ENST00000315127 ATP11AUNQ6ZP68 121 aa8.03□□□□□ -1.12
EDC3-201ENST00000315127 KRTAP1-4P0C5Y4 121 aa8.03□□□□□ -1.12
EDC3-201ENST00000315127 HRES1P13985 223 aa8.03□□□□□ -1.12
EDC3-201ENST00000315127 SEC61GP60059 68 aa8.03□□□□□ -1.12
EDC3-201ENST00000315127 FAT1Q14517 4588 aa8.01□□□□□ -1.13
EDC3-201ENST00000315127 FP248Q71RG6 208 aaPredicted RBP8□□□□□ -1.13
EDC3-201ENST00000315127 IGLV7-46A0A075B6I9 117 aa7.98□□□□□ -1.13
EDC3-201ENST00000315127 CYP4F30PQ9H0H9 118 aa7.98□□□□□ -1.13
EDC3-201ENST00000315127 DNAH3Q8TD57 4116 aa7.98□□□□□ -1.13
EDC3-201ENST00000315127 V9GYY9 64 aa7.97□□□□□ -1.13
EDC3-201ENST00000315127 VPS13DQ5THJ4 4388 aa7.96□□□□□ -1.13
EDC3-201ENST00000315127 DNAH5Q8TE73 4624 aa7.96□□□□□ -1.14
EDC3-201ENST00000315127 A0A1B0GU69 56 aa7.93□□□□□ -1.14
EDC3-201ENST00000315127 ZCCHC13Q8WW36 166 aaKnown RBP7.93□□□□□ -1.14
EDC3-201ENST00000315127 Q5XG85 94 aa7.92□□□□□ -1.14
EDC3-201ENST00000315127 LRP1BQ9NZR2 4599 aa7.9□□□□□ -1.14
EDC3-201ENST00000315127 DNAH8Q96JB1 4490 aa7.89□□□□□ -1.15
EDC3-201ENST00000315127 PMAIP1Q13794 54 aa7.88□□□□□ -1.15
EDC3-201ENST00000315127 SPANXA2-OT1Q8N9U9 137 aa7.88□□□□□ -1.15
EDC3-201ENST00000315127 SPINK7P58062 85 aa7.87□□□□□ -1.15
EDC3-201ENST00000315127 HYDINQ4G0P3 5121 aa7.87□□□□□ -1.15
EDC3-201ENST00000315127 DNAH6Q9C0G6 4158 aa7.86□□□□□ -1.15
EDC3-201ENST00000315127 DNAH2Q9P225 4427 aa7.85□□□□□ -1.15
EDC3-201ENST00000315127 FRAS1Q86XX4 4008 aa7.85□□□□□ -1.15
EDC3-201ENST00000315127 A0A1B0GVY2 172 aa7.82□□□□□ -1.16
EDC3-201ENST00000315127 DNAH17Q9UFH2 4485 aa7.8□□□□□ -1.16
EDC3-201ENST00000315127 PRO0628Q9UI54 55 aa7.76□□□□□ -1.17
EDC3-201ENST00000315127 DYNC1H1Q14204 4646 aaKnown RBP7.76□□□□□ -1.17
EDC3-201ENST00000315127 ASB16-AS1Q495Z4 193 aa7.74□□□□□ -1.17
EDC3-201ENST00000315127 KMT2CQ8NEZ4 4911 aaKnown RBP7.73□□□□□ -1.17
EDC3-201ENST00000315127 PKHD1P08F94 4074 aa7.72□□□□□ -1.17
EDC3-201ENST00000315127 KIAA1109Q2LD37 5005 aa7.72□□□□□ -1.17
EDC3-201ENST00000315127 MYCBP2O75592 4640 aa7.72□□□□□ -1.17
EDC3-201ENST00000315127 A8MU10 97 aa7.72□□□□□ -1.17
EDC3-201ENST00000315127 DYNC2H1Q8NCM8 4307 aaKnown RBP7.71□□□□□ -1.18
EDC3-201ENST00000315127 Q1T7F1 81 aa7.68□□□□□ -1.18
EDC3-201ENST00000315127 COX6B2Q6YFQ2 88 aa7.68□□□□□ -1.18
EDC3-201ENST00000315127 Q5VV11 94 aa7.68□□□□□ -1.18
EDC3-201ENST00000315127 A0A0D9SG42 100 aa7.66□□□□□ -1.18
EDC3-201ENST00000315127 SACSQ9NZJ4 4579 aa7.66□□□□□ -1.18
EDC3-201ENST00000315127 DMAC1Q96GE9 116 aa7.64□□□□□ -1.19
EDC3-201ENST00000315127 VPS13BQ7Z7G8 4022 aa7.64□□□□□ -1.19
EDC3-201ENST00000315127 KRTAP16-1A8MUX0 517 aa7.63□□□□□ -1.19
EDC3-201ENST00000315127 UQCR11O14957 56 aa7.61□□□□□ -1.19
EDC3-201ENST00000315127 HECTD4Q9Y4D8 3996 aa7.61□□□□□ -1.19
EDC3-201ENST00000315127 LINC01554Q52M75 96 aa7.61□□□□□ -1.19
EDC3-201ENST00000315127 RYR1P21817 5038 aa7.6□□□□□ -1.19
EDC3-201ENST00000315127 MIR22HGQ0VDD5 57 aa7.6□□□□□ -1.19
EDC3-201ENST00000315127 FAT3Q8TDW7 4589 aa7.59□□□□□ -1.19
EDC3-201ENST00000315127 LRP1Q07954 4544 aaKnown RBP7.59□□□□□ -1.19
EDC3-201ENST00000315127 RYR3Q15413 4870 aa7.59□□□□□ -1.2
EDC3-201ENST00000315127 LINC01558Q9Y6Z2 57 aa7.57□□□□□ -1.2
EDC3-201ENST00000315127 K7ERS5 55 aa7.56□□□□□ -1.2
EDC3-201ENST00000315127 RBM12B-AS1Q9P1G2 102 aa7.56□□□□□ -1.2
EDC3-201ENST00000315127 RPS29P62273 56 aaKnown RBP7.55□□□□□ -1.2
EDC3-201ENST00000315127 APOBP04114 4563 aaKnown RBP7.53□□□□□ -1.2
EDC3-201ENST00000315127 KRTAP4-5Q9BYR2 181 aa7.52□□□□□ -1.21
EDC3-201ENST00000315127 A8MUU9 505 aa7.51□□□□□ -1.21
EDC3-201ENST00000315127 XP32Q5T750 250 aa7.5□□□□□ -1.21
EDC3-201ENST00000315127 C20orf166-AS1Q96NR2 134 aa7.49□□□□□ -1.21
EDC3-201ENST00000315127 Q75L30 129 aa7.49□□□□□ -1.21
EDC3-201ENST00000315127 KRTAP10-8P60410 259 aa7.48□□□□□ -1.21
EDC3-201ENST00000315127 SPATA8Q6RVD6 105 aa7.48□□□□□ -1.21
EDC3-201ENST00000315127 LCA10Q71F78 164 aa7.47□□□□□ -1.21
EDC3-201ENST00000315127 KRTAP13-3Q3SY46 172 aa7.47□□□□□ -1.21
EDC3-201ENST00000315127 KRTAP10-4P60372 401 aaPredicted RBP7.47□□□□□ -1.21
EDC3-201ENST00000315127 A0A1B0GU33 70 aa7.46□□□□□ -1.21
EDC3-201ENST00000315127 ALMS1Q8TCU4 4167 aa7.46□□□□□ -1.22
EDC3-201ENST00000315127 CDC42SE1Q9NRR8 79 aa7.46□□□□□ -1.22
EDC3-201ENST00000315127 RPL37P61927 97 aaKnown RBP7.45□□□□□ -1.22
EDC3-201ENST00000315127 S4R3F8 94 aa7.45□□□□□ -1.22
EDC3-201ENST00000315127 SPINT4Q6UDR6 99 aa7.44□□□□□ -1.22
EDC3-201ENST00000315127 RYR2Q92736 4967 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms