RNA–Protein interactions for RNA: ENST00000312060.9

CTU2-201, Transcript of cytosolic thiouridylase subunit 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CTU2, Length 1,672 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-201ENST00000312060 Q8N9L7 120 aa12.4□□□□□ -0.42
CTU2-201ENST00000312060 K7EQZ3 153 aa12.38□□□□□ -0.43
CTU2-201ENST00000312060 FP248Q71RG6 208 aaPredicted RBP12.38□□□□□ -0.43
CTU2-201ENST00000312060 PRR15Q8IV56 129 aa12.36□□□□□ -0.43
CTU2-201ENST00000312060 A0A1B0GVX0 72 aa12.35□□□□□ -0.43
CTU2-201ENST00000312060 IGHV6-1A0A0B4J1U7 121 aa12.34□□□□□ -0.43
CTU2-201ENST00000312060 HIST1H4AP62805 103 aaKnown RBP12.33□□□□□ -0.44
CTU2-201ENST00000312060 PRR4Q16378 134 aa12.33□□□□□ -0.44
CTU2-201ENST00000312060 IGLV7-46A0A075B6I9 117 aa12.31□□□□□ -0.44
CTU2-201ENST00000312060 IMUPQ9GZP8 106 aa12.26□□□□□ -0.45
CTU2-201ENST00000312060 HERC1Q15751 4861 aa12.26□□□□□ -0.45
CTU2-201ENST00000312060 LINC00313P59037 77 aa12.26□□□□□ -0.45
CTU2-201ENST00000312060 NOTCH2NLQ7Z3S9 236 aa12.26□□□□□ -0.45
CTU2-201ENST00000312060 C8orf87E5RJ46 101 aa12.25□□□□□ -0.45
CTU2-201ENST00000312060 C8orf17Q9NRJ1 99 aa12.25□□□□□ -0.45
CTU2-201ENST00000312060 A0A087WVE0 104 aa12.24□□□□□ -0.45
CTU2-201ENST00000312060 C9orf92A6NGG3 77 aa12.22□□□□□ -0.45
CTU2-201ENST00000312060 MMP24-AS1A0A0U1RRL7 71 aa12.21□□□□□ -0.45
CTU2-201ENST00000312060 HCG22E2RYF7 251 aa12.19□□□□□ -0.46
CTU2-201ENST00000312060 KRTAP13-3Q3SY46 172 aa12.17□□□□□ -0.46
CTU2-201ENST00000312060 WFDC13Q8IUB5 93 aa12.17□□□□□ -0.46
CTU2-201ENST00000312060 hDV103S1A0JD37 113 aa12.16□□□□□ -0.46
CTU2-201ENST00000312060 CASC2Q6XLA1 102 aa12.16□□□□□ -0.46
CTU2-201ENST00000312060 LPAP08519 4548 aa12.14□□□□□ -0.47
CTU2-201ENST00000312060 TPRXLQ17RH7 258 aa12.13□□□□□ -0.47
CTU2-201ENST00000312060 KRTAP16-1A8MUX0 517 aa12.11□□□□□ -0.47
CTU2-201ENST00000312060 TMEM254Q8TBM7 123 aa12.1□□□□□ -0.47
CTU2-201ENST00000312060 MRPL34Q9BQ48 92 aaKnown RBP12.1□□□□□ -0.47
CTU2-201ENST00000312060 HMCN2Q8NDA2 5059 aa12.06□□□□□ -0.48
CTU2-201ENST00000312060 FAM236AA0A1B0GUQ0 79 aa12.05□□□□□ -0.48
CTU2-201ENST00000312060 FAM236BA0A1B0GV22 79 aa12.05□□□□□ -0.48
CTU2-201ENST00000312060 XP32Q5T750 250 aa12.03□□□□□ -0.48
CTU2-201ENST00000312060 Q8N9P0 234 aaPredicted RBP12.02□□□□□ -0.49
CTU2-201ENST00000312060 NDUFS5O43920 106 aa12.01□□□□□ -0.49
CTU2-201ENST00000312060 LRP2P98164 4655 aa12□□□□□ -0.49
CTU2-201ENST00000312060 C20orf166-AS1Q96NR2 134 aa12□□□□□ -0.49
CTU2-201ENST00000312060 A8MUU9 505 aa11.98□□□□□ -0.49
CTU2-201ENST00000312060 ANAPC13Q9BS18 74 aa11.96□□□□□ -0.5
CTU2-201ENST00000312060 Q75L30 129 aa11.95□□□□□ -0.5
CTU2-201ENST00000312060 RPL37P61927 97 aaKnown RBP11.91□□□□□ -0.5
CTU2-201ENST00000312060 TP53AIP1Q9HCN2 124 aa11.9□□□□□ -0.5
CTU2-201ENST00000312060 ATOX1O00244 68 aa11.89□□□□□ -0.51
CTU2-201ENST00000312060 OCR1Q9BZK8 76 aa11.87□□□□□ -0.51
CTU2-201ENST00000312060 ATP11AUNQ6ZP68 121 aa11.83□□□□□ -0.52
CTU2-201ENST00000312060 SMIM20Q8N5G0 67 aa11.83□□□□□ -0.52
CTU2-201ENST00000312060 UQCRQO14949 82 aa11.82□□□□□ -0.52
CTU2-201ENST00000312060 ZCCHC13Q8WW36 166 aaKnown RBP11.81□□□□□ -0.52
CTU2-201ENST00000312060 Q5W150 140 aa11.8□□□□□ -0.52
CTU2-201ENST00000312060 TRAV7A0A075B6U4 112 aa11.78□□□□□ -0.52
CTU2-201ENST00000312060 MUC17Q685J3 4493 aa11.77□□□□□ -0.52
CTU2-201ENST00000312060 TRAV22A0A0B4J277 110 aa11.75□□□□□ -0.53
CTU2-201ENST00000312060 PCOTHQ58A44 107 aa11.75□□□□□ -0.53
CTU2-201ENST00000312060 SEC61BP60468 96 aaKnown RBP11.74□□□□□ -0.53
CTU2-201ENST00000312060 SERP2Q8N6R1 65 aa11.72□□□□□ -0.53
CTU2-201ENST00000312060 C5orf47Q569G3 176 aa11.71□□□□□ -0.53
CTU2-201ENST00000312060 H0Y9P7 68 aa11.7□□□□□ -0.54
CTU2-201ENST00000312060 CCDC179H3BU77 68 aa11.7□□□□□ -0.54
CTU2-201ENST00000312060 COX7CP15954 63 aa11.68□□□□□ -0.54
CTU2-201ENST00000312060 MP68P56378 58 aa11.67□□□□□ -0.54
CTU2-201ENST00000312060 LINC00208Q96KT6 92 aa11.62□□□□□ -0.55
CTU2-201ENST00000312060 IGKV2D-30A0A075B6S6 120 aa11.59□□□□□ -0.55
CTU2-201ENST00000312060 IGKV2-30P06310 120 aa11.59□□□□□ -0.55
CTU2-201ENST00000312060 C1orf64Q8NEQ6 169 aa11.59□□□□□ -0.55
CTU2-201ENST00000312060 H3BPC8 53 aa11.58□□□□□ -0.56
CTU2-201ENST00000312060 LOC101927531A0A1B0GV80 90 aa11.57□□□□□ -0.56
CTU2-201ENST00000312060 SPINK7P58062 85 aa11.56□□□□□ -0.56
CTU2-201ENST00000312060 UBR4Q5T4S7 5183 aa11.56□□□□□ -0.56
CTU2-201ENST00000312060 C7orf65Q6ZTY9 151 aa11.55□□□□□ -0.56
CTU2-201ENST00000312060 C20orf197Q8N268 126 aa11.55□□□□□ -0.56
CTU2-201ENST00000312060 A0A0U1RQV1 116 aa11.52□□□□□ -0.57
CTU2-201ENST00000312060 CYP4F30PQ9H0H9 118 aa11.52□□□□□ -0.57
CTU2-201ENST00000312060 SNURFQ9Y675 71 aa11.5□□□□□ -0.57
CTU2-201ENST00000312060 KRTAP4-1Q9BYQ7 146 aa11.49□□□□□ -0.57
CTU2-201ENST00000312060 MUC2Q02817 5179 aa11.45□□□□□ -0.58
CTU2-201ENST00000312060 RNF213Q63HN8 5207 aa11.45□□□□□ -0.58
CTU2-201ENST00000312060 KLKP1Q107X0 134 aa11.44□□□□□ -0.58
CTU2-201ENST00000312060 HRES1P13985 223 aa11.36□□□□□ -0.59
CTU2-201ENST00000312060 CYSTM1Q9H1C7 97 aa11.35□□□□□ -0.59
CTU2-201ENST00000312060 C4orf26Q17RF5 130 aa11.3□□□□□ -0.6
CTU2-201ENST00000312060 NDUFC1O43677 76 aa11.29□□□□□ -0.6
CTU2-201ENST00000312060 TMEM258P61165 79 aa11.28□□□□□ -0.6
CTU2-201ENST00000312060 MPLKIPQ8TAP9 179 aa11.27□□□□□ -0.61
CTU2-201ENST00000312060 RBM12B-AS1Q9P1G2 102 aa11.26□□□□□ -0.61
CTU2-201ENST00000312060 H7BZZ5 65 aa11.24□□□□□ -0.61
CTU2-201ENST00000312060 RPS28P62857 69 aaKnown RBP11.2□□□□□ -0.62
CTU2-201ENST00000312060 COX6B2Q6YFQ2 88 aa11.2□□□□□ -0.62
CTU2-201ENST00000312060 FAM236DA0A1B0GTK5 79 aa11.17□□□□□ -0.62
CTU2-201ENST00000312060 FAM236CP0DP71 79 aa11.17□□□□□ -0.62
CTU2-201ENST00000312060 SPANXA2-OT1Q8N9U9 137 aa11.17□□□□□ -0.62
CTU2-201ENST00000312060 KRTAP3-1Q9BYR8 98 aa11.14□□□□□ -0.63
CTU2-201ENST00000312060 KRTAP19-2Q3LHN2 52 aa11.11□□□□□ -0.63
CTU2-201ENST00000312060 A8MUN3 132 aa11.07□□□□□ -0.64
CTU2-201ENST00000312060 DMAC1Q96GE9 116 aa11.07□□□□□ -0.64
CTU2-201ENST00000312060 ATP5EP56381 51 aaPredicted RBP11.06□□□□□ -0.64
CTU2-201ENST00000312060 H1FX-AS1Q4G0G2 97 aa11.04□□□□□ -0.64
CTU2-201ENST00000312060 FAT4Q6V0I7 4981 aa11.02□□□□□ -0.64
CTU2-201ENST00000312060 ACYP2P14621 99 aa10.99□□□□□ -0.65
CTU2-201ENST00000312060 LCE2CQ5TA81 110 aa10.98□□□□□ -0.65
CTU2-201ENST00000312060 FLGP20930 4061 aaPredicted RBP10.98□□□□□ -0.65
CTU2-201ENST00000312060 SERP1Q9Y6X1 66 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms